Phylogenetic investigation and divergence dating of Poa (Poaceae, tribe Poeae) in the Australasian region
The Australasian region contains a significant proportion of worldwide Poa diversity, but the evolutionary relationships of taxa from this region are incompletely understood. Most Australasian species have been placed in a monophyletic Poa subgenus, Poa supersection Homalopoa section Brizoides clade...
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description | The Australasian region contains a significant proportion of worldwide Poa diversity, but the evolutionary relationships of taxa from this region are incompletely understood. Most Australasian species have been placed in a monophyletic Poa subgenus, Poa supersection Homalopoa section Brizoides clade, but with limited resolution of relationships. In this study, phylogenetic relationships were reconstructed for Australasian Poa, using three plastid (rbcL and matK genes and the rpl32‐trnL intergenic spacer) and two nuclear [internal/external transcribed spacer (ITS/ETS)] markers. Seventy‐five Poa spp. were represented (including 42 Australian, nine New Guinean, nine New Zealand and three Australian/New Zealand species). Maximum parsimony, maximum likelihood and Bayesian inference criteria were applied for phylogenetic reconstruction. Divergence dates were estimated using Bayesian inference, with a relaxed clock applied and rates sampled from an uncorrelated log‐normal distribution. Australasian Poa spp. are placed in three lineages (section Brizoides, section Parodiochloa and the ‘X clade’), each of which is closely related to non‐Australasian taxa or clades. Section Brizoides subsection Australopoa is polyphyletic as currently circumscribed. In Australasia, Poa has diversified within the last 4.3 Mya, with divergence dating results broadly congruent with fossil data that record the appearance of vegetation with a prominent grassland understorey or shrubland/grassland mosaic vegetation dating from the mid‐Pliocene. © 2014 The Linnean Society of London, Botanical Journal of the Linnean Society, 2014, 175, 523–552. |
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Most Australasian species have been placed in a monophyletic Poa subgenus, Poa supersection Homalopoa section Brizoides clade, but with limited resolution of relationships. In this study, phylogenetic relationships were reconstructed for Australasian Poa, using three plastid (rbcL and matK genes and the rpl32‐trnL intergenic spacer) and two nuclear [internal/external transcribed spacer (ITS/ETS)] markers. Seventy‐five Poa spp. were represented (including 42 Australian, nine New Guinean, nine New Zealand and three Australian/New Zealand species). Maximum parsimony, maximum likelihood and Bayesian inference criteria were applied for phylogenetic reconstruction. Divergence dates were estimated using Bayesian inference, with a relaxed clock applied and rates sampled from an uncorrelated log‐normal distribution. Australasian Poa spp. are placed in three lineages (section Brizoides, section Parodiochloa and the ‘X clade’), each of which is closely related to non‐Australasian taxa or clades. Section Brizoides subsection Australopoa is polyphyletic as currently circumscribed. In Australasia, Poa has diversified within the last 4.3 Mya, with divergence dating results broadly congruent with fossil data that record the appearance of vegetation with a prominent grassland understorey or shrubland/grassland mosaic vegetation dating from the mid‐Pliocene. © 2014 The Linnean Society of London, Botanical Journal of the Linnean Society, 2014, 175, 523–552.</description><identifier>ISSN: 0024-4074</identifier><identifier>EISSN: 1095-8339</identifier><identifier>DOI: 10.1111/boj.12185</identifier><language>eng</language><publisher>Oxford: Blackwell Publishing Ltd</publisher><subject>Australia ; biogeography ; Malesia ; molecular phylogeny ; New Zealand ; Poa ; Poaceae ; temperate grasslands ; Tertiary</subject><ispartof>Botanical journal of the Linnean Society, 2014-08, Vol.175 (4), p.523-552</ispartof><rights>2014 The Linnean Society of London</rights><rights>Copyright © 2014 The Linnean Society of London</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c3345-d28f7a7e13ebbcf2d9fefc50787bab60fb257486a1dc7f4ecbd30ba93e71bb903</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1111%2Fboj.12185$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1111%2Fboj.12185$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>315,781,785,1418,27929,27930,45579,45580</link.rule.ids></links><search><creatorcontrib>Birch, Joanne L.</creatorcontrib><creatorcontrib>Cantrill, David J.</creatorcontrib><creatorcontrib>Walsh, Neville G.</creatorcontrib><creatorcontrib>Murphy, Daniel J.</creatorcontrib><title>Phylogenetic investigation and divergence dating of Poa (Poaceae, tribe Poeae) in the Australasian region</title><title>Botanical journal of the Linnean Society</title><addtitle>Bot J Linn Soc</addtitle><description>The Australasian region contains a significant proportion of worldwide Poa diversity, but the evolutionary relationships of taxa from this region are incompletely understood. Most Australasian species have been placed in a monophyletic Poa subgenus, Poa supersection Homalopoa section Brizoides clade, but with limited resolution of relationships. In this study, phylogenetic relationships were reconstructed for Australasian Poa, using three plastid (rbcL and matK genes and the rpl32‐trnL intergenic spacer) and two nuclear [internal/external transcribed spacer (ITS/ETS)] markers. Seventy‐five Poa spp. were represented (including 42 Australian, nine New Guinean, nine New Zealand and three Australian/New Zealand species). Maximum parsimony, maximum likelihood and Bayesian inference criteria were applied for phylogenetic reconstruction. Divergence dates were estimated using Bayesian inference, with a relaxed clock applied and rates sampled from an uncorrelated log‐normal distribution. Australasian Poa spp. are placed in three lineages (section Brizoides, section Parodiochloa and the ‘X clade’), each of which is closely related to non‐Australasian taxa or clades. Section Brizoides subsection Australopoa is polyphyletic as currently circumscribed. In Australasia, Poa has diversified within the last 4.3 Mya, with divergence dating results broadly congruent with fossil data that record the appearance of vegetation with a prominent grassland understorey or shrubland/grassland mosaic vegetation dating from the mid‐Pliocene. © 2014 The Linnean Society of London, Botanical Journal of the Linnean Society, 2014, 175, 523–552.</description><subject>Australia</subject><subject>biogeography</subject><subject>Malesia</subject><subject>molecular phylogeny</subject><subject>New Zealand</subject><subject>Poa</subject><subject>Poaceae</subject><subject>temperate grasslands</subject><subject>Tertiary</subject><issn>0024-4074</issn><issn>1095-8339</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2014</creationdate><recordtype>article</recordtype><recordid>eNpdkF9PwyAUxYnRxDl98BuQ-KKJdVCgtI-6-DfGLUZj4gsBejuZtZ3QTvftRWd8kIcL9_I7J3AQ2qfkhMY1Mu38hKY0FxtoQEkhkpyxYhMNCEl5wonk22gnhDkhlHJZDJCbvqzqdgYNdM5i1ywhdG6mO9c2WDclLt0SfLy2gMs4bWa4rfC01fgwFgsajnHnnYE4i81RdMDdC-DTPnRe1zo43WAPs2i3i7YqXQfY-92H6PHi_GF8ldxOLq_Hp7eJZYyLpEzzSmoJlIExtkrLooLKCiJzabTJSGVSIXmeaVpaWXGwpmTE6IKBpMYUhA3R4dp34dv3Pn5Hvblgoa51A20fFBVZlouUpVlED_6h87b3TXxdpLiQhUy5iNRoTX24GlZq4d2b9itFifpOXMXE1U_i6mxy83OIimStcKGDzz-F9q8qk0wK9XR3qS6e7zNJ2VRx9gX5coVU</recordid><startdate>201408</startdate><enddate>201408</enddate><creator>Birch, Joanne L.</creator><creator>Cantrill, David J.</creator><creator>Walsh, Neville G.</creator><creator>Murphy, Daniel J.</creator><general>Blackwell Publishing Ltd</general><general>Oxford University Press</general><scope>BSCLL</scope><scope>7SN</scope><scope>7SS</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope></search><sort><creationdate>201408</creationdate><title>Phylogenetic investigation and divergence dating of Poa (Poaceae, tribe Poeae) in the Australasian region</title><author>Birch, Joanne L. ; Cantrill, David J. ; Walsh, Neville G. ; Murphy, Daniel J.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c3345-d28f7a7e13ebbcf2d9fefc50787bab60fb257486a1dc7f4ecbd30ba93e71bb903</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2014</creationdate><topic>Australia</topic><topic>biogeography</topic><topic>Malesia</topic><topic>molecular phylogeny</topic><topic>New Zealand</topic><topic>Poa</topic><topic>Poaceae</topic><topic>temperate grasslands</topic><topic>Tertiary</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Birch, Joanne L.</creatorcontrib><creatorcontrib>Cantrill, David J.</creatorcontrib><creatorcontrib>Walsh, Neville G.</creatorcontrib><creatorcontrib>Murphy, Daniel J.</creatorcontrib><collection>Istex</collection><collection>Ecology Abstracts</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><jtitle>Botanical journal of the Linnean Society</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Birch, Joanne L.</au><au>Cantrill, David J.</au><au>Walsh, Neville G.</au><au>Murphy, Daniel J.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Phylogenetic investigation and divergence dating of Poa (Poaceae, tribe Poeae) in the Australasian region</atitle><jtitle>Botanical journal of the Linnean Society</jtitle><addtitle>Bot J Linn Soc</addtitle><date>2014-08</date><risdate>2014</risdate><volume>175</volume><issue>4</issue><spage>523</spage><epage>552</epage><pages>523-552</pages><issn>0024-4074</issn><eissn>1095-8339</eissn><abstract>The Australasian region contains a significant proportion of worldwide Poa diversity, but the evolutionary relationships of taxa from this region are incompletely understood. Most Australasian species have been placed in a monophyletic Poa subgenus, Poa supersection Homalopoa section Brizoides clade, but with limited resolution of relationships. In this study, phylogenetic relationships were reconstructed for Australasian Poa, using three plastid (rbcL and matK genes and the rpl32‐trnL intergenic spacer) and two nuclear [internal/external transcribed spacer (ITS/ETS)] markers. Seventy‐five Poa spp. were represented (including 42 Australian, nine New Guinean, nine New Zealand and three Australian/New Zealand species). Maximum parsimony, maximum likelihood and Bayesian inference criteria were applied for phylogenetic reconstruction. Divergence dates were estimated using Bayesian inference, with a relaxed clock applied and rates sampled from an uncorrelated log‐normal distribution. Australasian Poa spp. are placed in three lineages (section Brizoides, section Parodiochloa and the ‘X clade’), each of which is closely related to non‐Australasian taxa or clades. Section Brizoides subsection Australopoa is polyphyletic as currently circumscribed. In Australasia, Poa has diversified within the last 4.3 Mya, with divergence dating results broadly congruent with fossil data that record the appearance of vegetation with a prominent grassland understorey or shrubland/grassland mosaic vegetation dating from the mid‐Pliocene. © 2014 The Linnean Society of London, Botanical Journal of the Linnean Society, 2014, 175, 523–552.</abstract><cop>Oxford</cop><pub>Blackwell Publishing Ltd</pub><doi>10.1111/boj.12185</doi><tpages>30</tpages></addata></record> |
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source | Wiley Online Library - AutoHoldings Journals; Oxford University Press Journals All Titles (1996-Current) |
subjects | Australia biogeography Malesia molecular phylogeny New Zealand Poa Poaceae temperate grasslands Tertiary |
title | Phylogenetic investigation and divergence dating of Poa (Poaceae, tribe Poeae) in the Australasian region |
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