Somatic RHOA mutation in angioimmunoblastic T cell lymphoma

Shigeru Chiba and colleagues report exome sequencing of angioimmunoblastic T cell lymphoma (AITL) and other peripheral T cell lymphomas and identify a recurrent somatic RHOA mutation encoding a p.Gly17Val alteration in 68% of AITL samples. Angioimmunoblastic T cell lymphoma (AITL) is a distinct subt...

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Veröffentlicht in:Nature genetics 2014-02, Vol.46 (2), p.171-175
Hauptverfasser: Sakata-Yanagimoto, Mamiko, Enami, Terukazu, Yoshida, Kenichi, Shiraishi, Yuichi, Ishii, Ryohei, Miyake, Yasuyuki, Muto, Hideharu, Tsuyama, Naoko, Sato-Otsubo, Aiko, Okuno, Yusuke, Sakata, Seiji, Kamada, Yuhei, Nakamoto-Matsubara, Rie, Tran, Nguyen Bich, Izutsu, Koji, Sato, Yusuke, Ohta, Yasunori, Furuta, Junichi, Shimizu, Seiichi, Komeno, Takuya, Sato, Yuji, Ito, Takayoshi, Noguchi, Masayuki, Noguchi, Emiko, Sanada, Masashi, Chiba, Kenichi, Tanaka, Hiroko, Suzukawa, Kazumi, Nanmoku, Toru, Hasegawa, Yuichi, Nureki, Osamu, Miyano, Satoru, Nakamura, Naoya, Takeuchi, Kengo, Ogawa, Seishi, Chiba, Shigeru
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container_end_page 175
container_issue 2
container_start_page 171
container_title Nature genetics
container_volume 46
creator Sakata-Yanagimoto, Mamiko
Enami, Terukazu
Yoshida, Kenichi
Shiraishi, Yuichi
Ishii, Ryohei
Miyake, Yasuyuki
Muto, Hideharu
Tsuyama, Naoko
Sato-Otsubo, Aiko
Okuno, Yusuke
Sakata, Seiji
Kamada, Yuhei
Nakamoto-Matsubara, Rie
Tran, Nguyen Bich
Izutsu, Koji
Sato, Yusuke
Ohta, Yasunori
Furuta, Junichi
Shimizu, Seiichi
Komeno, Takuya
Sato, Yuji
Ito, Takayoshi
Noguchi, Masayuki
Noguchi, Emiko
Sanada, Masashi
Chiba, Kenichi
Tanaka, Hiroko
Suzukawa, Kazumi
Nanmoku, Toru
Hasegawa, Yuichi
Nureki, Osamu
Miyano, Satoru
Nakamura, Naoya
Takeuchi, Kengo
Ogawa, Seishi
Chiba, Shigeru
description Shigeru Chiba and colleagues report exome sequencing of angioimmunoblastic T cell lymphoma (AITL) and other peripheral T cell lymphomas and identify a recurrent somatic RHOA mutation encoding a p.Gly17Val alteration in 68% of AITL samples. Angioimmunoblastic T cell lymphoma (AITL) is a distinct subtype of peripheral T cell lymphoma characterized by generalized lymphadenopathy and frequent autoimmune-like manifestations 1 , 2 . Although frequent mutations in TET2 , IDH2 and DNMT3A , which are common to various hematologic malignancies 3 , 4 , have been identified in AITL 5 , 6 , 7 , 8 , the molecular pathogenesis specific to this lymphoma subtype is unknown. Here we report somatic RHOA mutations encoding a p.Gly17Val alteration in 68% of AITL samples. Remarkably, all cases with the mutation encoding p.Gly17Val also had TET2 mutations. The RHOA mutation encoding p.Gly17Val was specifically identified in tumor cells, whereas TET2 mutations were found in both tumor cells and non-tumor hematopoietic cells. RHOA encodes a small GTPase that regulates diverse biological processes. We demonstrated that the Gly17Val RHOA mutant did not bind GTP and also inhibited wild-type RHOA function. Our findings suggest that impaired RHOA function in cooperation with preceding loss of TET2 function contributes to AITL-specific pathogenesis.
doi_str_mv 10.1038/ng.2872
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Angioimmunoblastic T cell lymphoma (AITL) is a distinct subtype of peripheral T cell lymphoma characterized by generalized lymphadenopathy and frequent autoimmune-like manifestations 1 , 2 . Although frequent mutations in TET2 , IDH2 and DNMT3A , which are common to various hematologic malignancies 3 , 4 , have been identified in AITL 5 , 6 , 7 , 8 , the molecular pathogenesis specific to this lymphoma subtype is unknown. Here we report somatic RHOA mutations encoding a p.Gly17Val alteration in 68% of AITL samples. Remarkably, all cases with the mutation encoding p.Gly17Val also had TET2 mutations. The RHOA mutation encoding p.Gly17Val was specifically identified in tumor cells, whereas TET2 mutations were found in both tumor cells and non-tumor hematopoietic cells. RHOA encodes a small GTPase that regulates diverse biological processes. We demonstrated that the Gly17Val RHOA mutant did not bind GTP and also inhibited wild-type RHOA function. Our findings suggest that impaired RHOA function in cooperation with preceding loss of TET2 function contributes to AITL-specific pathogenesis.</description><identifier>ISSN: 1061-4036</identifier><identifier>EISSN: 1546-1718</identifier><identifier>DOI: 10.1038/ng.2872</identifier><identifier>PMID: 24413737</identifier><language>eng</language><publisher>New York: Nature Publishing Group US</publisher><subject>13/31 ; 13/51 ; 14/1 ; 14/19 ; 38/39 ; 45/23 ; 631/208/514/1948 ; 692/699/1541/1990/291/1621/1916 ; Agriculture ; Animal Genetics and Genomics ; Animals ; Base Sequence ; Biomedicine ; Bromodeoxyuridine ; Cancer Research ; DNA (Cytosine-5-)-Methyltransferases - genetics ; DNA-Binding Proteins - genetics ; Exome - genetics ; Gene expression ; Gene Function ; Gene mutations ; Genetic aspects ; Genomes ; Health aspects ; Human Genetics ; Humans ; Immunoblastic Lymphadenopathy - genetics ; Isocitrate Dehydrogenase - genetics ; Jurkat Cells ; letter ; Lymphocytes ; Lymphoma ; Lymphoma, T-Cell, Peripheral - genetics ; Lymphoma, T-Cell, Peripheral - pathology ; Medical research ; Mice ; Molecular Sequence Data ; Mutation ; Mutation, Missense - genetics ; NIH 3T3 Cells ; Non-Hodgkin's lymphomas ; Proto-Oncogene Proteins - genetics ; rhoA GTP-Binding Protein - genetics ; Risk factors ; Sequence Analysis, DNA ; Tumors</subject><ispartof>Nature genetics, 2014-02, Vol.46 (2), p.171-175</ispartof><rights>Springer Nature America, Inc. 2013</rights><rights>COPYRIGHT 2014 Nature Publishing Group</rights><rights>Copyright Nature Publishing Group Feb 2014</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c510t-9ac948bb37f12856b65bb340e5a4aca500eb43eb67abc40b14ec96b44f995e3f3</citedby><cites>FETCH-LOGICAL-c510t-9ac948bb37f12856b65bb340e5a4aca500eb43eb67abc40b14ec96b44f995e3f3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1038/ng.2872$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1038/ng.2872$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,777,781,27905,27906,41469,42538,51300</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/24413737$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Sakata-Yanagimoto, Mamiko</creatorcontrib><creatorcontrib>Enami, Terukazu</creatorcontrib><creatorcontrib>Yoshida, Kenichi</creatorcontrib><creatorcontrib>Shiraishi, Yuichi</creatorcontrib><creatorcontrib>Ishii, Ryohei</creatorcontrib><creatorcontrib>Miyake, Yasuyuki</creatorcontrib><creatorcontrib>Muto, Hideharu</creatorcontrib><creatorcontrib>Tsuyama, Naoko</creatorcontrib><creatorcontrib>Sato-Otsubo, Aiko</creatorcontrib><creatorcontrib>Okuno, Yusuke</creatorcontrib><creatorcontrib>Sakata, Seiji</creatorcontrib><creatorcontrib>Kamada, Yuhei</creatorcontrib><creatorcontrib>Nakamoto-Matsubara, Rie</creatorcontrib><creatorcontrib>Tran, Nguyen Bich</creatorcontrib><creatorcontrib>Izutsu, Koji</creatorcontrib><creatorcontrib>Sato, Yusuke</creatorcontrib><creatorcontrib>Ohta, Yasunori</creatorcontrib><creatorcontrib>Furuta, Junichi</creatorcontrib><creatorcontrib>Shimizu, Seiichi</creatorcontrib><creatorcontrib>Komeno, Takuya</creatorcontrib><creatorcontrib>Sato, Yuji</creatorcontrib><creatorcontrib>Ito, Takayoshi</creatorcontrib><creatorcontrib>Noguchi, Masayuki</creatorcontrib><creatorcontrib>Noguchi, Emiko</creatorcontrib><creatorcontrib>Sanada, Masashi</creatorcontrib><creatorcontrib>Chiba, Kenichi</creatorcontrib><creatorcontrib>Tanaka, Hiroko</creatorcontrib><creatorcontrib>Suzukawa, Kazumi</creatorcontrib><creatorcontrib>Nanmoku, Toru</creatorcontrib><creatorcontrib>Hasegawa, Yuichi</creatorcontrib><creatorcontrib>Nureki, Osamu</creatorcontrib><creatorcontrib>Miyano, Satoru</creatorcontrib><creatorcontrib>Nakamura, Naoya</creatorcontrib><creatorcontrib>Takeuchi, Kengo</creatorcontrib><creatorcontrib>Ogawa, Seishi</creatorcontrib><creatorcontrib>Chiba, Shigeru</creatorcontrib><title>Somatic RHOA mutation in angioimmunoblastic T cell lymphoma</title><title>Nature genetics</title><addtitle>Nat Genet</addtitle><addtitle>Nat Genet</addtitle><description>Shigeru Chiba and colleagues report exome sequencing of angioimmunoblastic T cell lymphoma (AITL) and other peripheral T cell lymphomas and identify a recurrent somatic RHOA mutation encoding a p.Gly17Val alteration in 68% of AITL samples. Angioimmunoblastic T cell lymphoma (AITL) is a distinct subtype of peripheral T cell lymphoma characterized by generalized lymphadenopathy and frequent autoimmune-like manifestations 1 , 2 . Although frequent mutations in TET2 , IDH2 and DNMT3A , which are common to various hematologic malignancies 3 , 4 , have been identified in AITL 5 , 6 , 7 , 8 , the molecular pathogenesis specific to this lymphoma subtype is unknown. Here we report somatic RHOA mutations encoding a p.Gly17Val alteration in 68% of AITL samples. Remarkably, all cases with the mutation encoding p.Gly17Val also had TET2 mutations. The RHOA mutation encoding p.Gly17Val was specifically identified in tumor cells, whereas TET2 mutations were found in both tumor cells and non-tumor hematopoietic cells. RHOA encodes a small GTPase that regulates diverse biological processes. We demonstrated that the Gly17Val RHOA mutant did not bind GTP and also inhibited wild-type RHOA function. Our findings suggest that impaired RHOA function in cooperation with preceding loss of TET2 function contributes to AITL-specific pathogenesis.</description><subject>13/31</subject><subject>13/51</subject><subject>14/1</subject><subject>14/19</subject><subject>38/39</subject><subject>45/23</subject><subject>631/208/514/1948</subject><subject>692/699/1541/1990/291/1621/1916</subject><subject>Agriculture</subject><subject>Animal Genetics and Genomics</subject><subject>Animals</subject><subject>Base Sequence</subject><subject>Biomedicine</subject><subject>Bromodeoxyuridine</subject><subject>Cancer Research</subject><subject>DNA (Cytosine-5-)-Methyltransferases - genetics</subject><subject>DNA-Binding Proteins - genetics</subject><subject>Exome - genetics</subject><subject>Gene expression</subject><subject>Gene Function</subject><subject>Gene mutations</subject><subject>Genetic aspects</subject><subject>Genomes</subject><subject>Health aspects</subject><subject>Human 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Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>Research Library Prep</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health &amp; Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health &amp; Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Research Library</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biological Science Database</collection><collection>Research Library (Corporate)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central Basic</collection><collection>Genetics Abstracts</collection><jtitle>Nature genetics</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Sakata-Yanagimoto, Mamiko</au><au>Enami, Terukazu</au><au>Yoshida, Kenichi</au><au>Shiraishi, Yuichi</au><au>Ishii, Ryohei</au><au>Miyake, Yasuyuki</au><au>Muto, Hideharu</au><au>Tsuyama, Naoko</au><au>Sato-Otsubo, Aiko</au><au>Okuno, Yusuke</au><au>Sakata, Seiji</au><au>Kamada, Yuhei</au><au>Nakamoto-Matsubara, Rie</au><au>Tran, Nguyen Bich</au><au>Izutsu, Koji</au><au>Sato, Yusuke</au><au>Ohta, Yasunori</au><au>Furuta, Junichi</au><au>Shimizu, Seiichi</au><au>Komeno, Takuya</au><au>Sato, Yuji</au><au>Ito, Takayoshi</au><au>Noguchi, Masayuki</au><au>Noguchi, Emiko</au><au>Sanada, Masashi</au><au>Chiba, Kenichi</au><au>Tanaka, Hiroko</au><au>Suzukawa, Kazumi</au><au>Nanmoku, Toru</au><au>Hasegawa, Yuichi</au><au>Nureki, Osamu</au><au>Miyano, Satoru</au><au>Nakamura, Naoya</au><au>Takeuchi, Kengo</au><au>Ogawa, Seishi</au><au>Chiba, Shigeru</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Somatic RHOA mutation in angioimmunoblastic T cell lymphoma</atitle><jtitle>Nature genetics</jtitle><stitle>Nat Genet</stitle><addtitle>Nat Genet</addtitle><date>2014-02-01</date><risdate>2014</risdate><volume>46</volume><issue>2</issue><spage>171</spage><epage>175</epage><pages>171-175</pages><issn>1061-4036</issn><eissn>1546-1718</eissn><abstract>Shigeru Chiba and colleagues report exome sequencing of angioimmunoblastic T cell lymphoma (AITL) and other peripheral T cell lymphomas and identify a recurrent somatic RHOA mutation encoding a p.Gly17Val alteration in 68% of AITL samples. Angioimmunoblastic T cell lymphoma (AITL) is a distinct subtype of peripheral T cell lymphoma characterized by generalized lymphadenopathy and frequent autoimmune-like manifestations 1 , 2 . Although frequent mutations in TET2 , IDH2 and DNMT3A , which are common to various hematologic malignancies 3 , 4 , have been identified in AITL 5 , 6 , 7 , 8 , the molecular pathogenesis specific to this lymphoma subtype is unknown. Here we report somatic RHOA mutations encoding a p.Gly17Val alteration in 68% of AITL samples. Remarkably, all cases with the mutation encoding p.Gly17Val also had TET2 mutations. The RHOA mutation encoding p.Gly17Val was specifically identified in tumor cells, whereas TET2 mutations were found in both tumor cells and non-tumor hematopoietic cells. RHOA encodes a small GTPase that regulates diverse biological processes. We demonstrated that the Gly17Val RHOA mutant did not bind GTP and also inhibited wild-type RHOA function. Our findings suggest that impaired RHOA function in cooperation with preceding loss of TET2 function contributes to AITL-specific pathogenesis.</abstract><cop>New York</cop><pub>Nature Publishing Group US</pub><pmid>24413737</pmid><doi>10.1038/ng.2872</doi><tpages>5</tpages></addata></record>
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identifier ISSN: 1061-4036
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issn 1061-4036
1546-1718
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source MEDLINE; Springer Nature - Complete Springer Journals; Nature Journals Online
subjects 13/31
13/51
14/1
14/19
38/39
45/23
631/208/514/1948
692/699/1541/1990/291/1621/1916
Agriculture
Animal Genetics and Genomics
Animals
Base Sequence
Biomedicine
Bromodeoxyuridine
Cancer Research
DNA (Cytosine-5-)-Methyltransferases - genetics
DNA-Binding Proteins - genetics
Exome - genetics
Gene expression
Gene Function
Gene mutations
Genetic aspects
Genomes
Health aspects
Human Genetics
Humans
Immunoblastic Lymphadenopathy - genetics
Isocitrate Dehydrogenase - genetics
Jurkat Cells
letter
Lymphocytes
Lymphoma
Lymphoma, T-Cell, Peripheral - genetics
Lymphoma, T-Cell, Peripheral - pathology
Medical research
Mice
Molecular Sequence Data
Mutation
Mutation, Missense - genetics
NIH 3T3 Cells
Non-Hodgkin's lymphomas
Proto-Oncogene Proteins - genetics
rhoA GTP-Binding Protein - genetics
Risk factors
Sequence Analysis, DNA
Tumors
title Somatic RHOA mutation in angioimmunoblastic T cell lymphoma
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