Performance of a new gelled nested PCR test for the diagnosis of imported malaria: comparison with microscopy, rapid diagnostic test, and real-time PCR
Microscopy and rapid diagnostic tests (RDTs) are the techniques commonly used for malaria diagnosis but they are usually insensitive at very low levels of parasitemia. Nested PCR is commonly used as a reference technique in the diagnosis of malaria due to its high sensitivity and specificity. Howeve...
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description | Microscopy and rapid diagnostic tests (RDTs) are the techniques commonly used for malaria diagnosis but they are usually insensitive at very low levels of parasitemia. Nested PCR is commonly used as a reference technique in the diagnosis of malaria due to its high sensitivity and specificity. However, it is a cumbersome assay only available in reference centers. We evaluated a new nested PCR-based assay, BIOMALAR kit (Biotools B&M Labs, Madrid, Spain) which employs ready-to-use gelled reagents and allows the identification of the main four species of Plasmodium. Blood samples were obtained from patients with clinical suspicion of malaria. A total of 94 subjects were studied. Fifty-two (55.3 %) of them were malaria-infected subjects corresponding to 48 cases of Plasmodium falciparum, 1 Plasmodium malariae, 2 Plasmodium vivax, and 1 Plasmodium ovale. The performance of the BIOMALAR test was compared with microscopy, rapid diagnostic test (RDT) (BinaxNOW® Malaria) and real-time quantitative PCR (qPCR). The BIOMALAR test showed a sensitivity of 98.1 % (95 % confidence interval [CI], 89.7–100), superior to microscopy (82.7 % [95 % CI, 69.7–91.8]) and RDT (94.2 % [95 % CI, 84.1–98.8]) and similar to qPCR (100 % [95 % CI, 93.2–100]). In terms of specificity, the BIOMALAR assay showed the same value as microscopy and qPCR (100 % [95 % CI, 93.2–100]). Nine subjects were submicroscopic carriers of malaria. The BIOMALAR test identified almost all of them (8/9) in comparison with RDT (6/9) and microscopy (0/9). In conclusion, the BIOMALAR is a PCR-based assay easy to use with an excellent performance and especially useful for diagnosis submicroscopic malaria. |
doi_str_mv | 10.1007/s00436-014-3911-z |
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Nested PCR is commonly used as a reference technique in the diagnosis of malaria due to its high sensitivity and specificity. However, it is a cumbersome assay only available in reference centers. We evaluated a new nested PCR-based assay, BIOMALAR kit (Biotools B&M Labs, Madrid, Spain) which employs ready-to-use gelled reagents and allows the identification of the main four species of Plasmodium. Blood samples were obtained from patients with clinical suspicion of malaria. A total of 94 subjects were studied. Fifty-two (55.3 %) of them were malaria-infected subjects corresponding to 48 cases of Plasmodium falciparum, 1 Plasmodium malariae, 2 Plasmodium vivax, and 1 Plasmodium ovale. The performance of the BIOMALAR test was compared with microscopy, rapid diagnostic test (RDT) (BinaxNOW® Malaria) and real-time quantitative PCR (qPCR). The BIOMALAR test showed a sensitivity of 98.1 % (95 % confidence interval [CI], 89.7–100), superior to microscopy (82.7 % [95 % CI, 69.7–91.8]) and RDT (94.2 % [95 % CI, 84.1–98.8]) and similar to qPCR (100 % [95 % CI, 93.2–100]). In terms of specificity, the BIOMALAR assay showed the same value as microscopy and qPCR (100 % [95 % CI, 93.2–100]). Nine subjects were submicroscopic carriers of malaria. The BIOMALAR test identified almost all of them (8/9) in comparison with RDT (6/9) and microscopy (0/9). In conclusion, the BIOMALAR is a PCR-based assay easy to use with an excellent performance and especially useful for diagnosis submicroscopic malaria.</description><identifier>ISSN: 0932-0113</identifier><identifier>EISSN: 1432-1955</identifier><identifier>DOI: 10.1007/s00436-014-3911-z</identifier><identifier>PMID: 24770719</identifier><language>eng</language><publisher>Berlin/Heidelberg: Springer-Verlag</publisher><subject>Adult ; Analysis ; Biomedical and Life Sciences ; Biomedicine ; blood ; Care and treatment ; Case-Control Studies ; Complications and side effects ; confidence interval ; Development and progression ; Diagnosis ; diagnostic techniques ; Diagnostic Tests, Routine ; Female ; Genes, rRNA ; Humans ; Immunology ; Malaria ; Malaria - diagnosis ; Malaria - parasitology ; Male ; Medical Microbiology ; Medical tests ; Microbiology ; Microscopy ; Middle Aged ; Original Paper ; parasitemia ; Patient outcomes ; patients ; Plasmodium falciparum ; Plasmodium falciparum - genetics ; Plasmodium falciparum - isolation & purification ; Plasmodium malariae ; Plasmodium malariae - genetics ; Plasmodium malariae - isolation & purification ; Plasmodium ovale ; Plasmodium ovale - genetics ; Plasmodium ovale - isolation & purification ; Plasmodium vivax ; Plasmodium vivax - genetics ; Plasmodium vivax - isolation & purification ; Polymerase Chain Reaction - methods ; quantitative polymerase chain reaction ; Risk factors ; RNA, Ribosomal, 18S - genetics ; Sensitivity and Specificity ; Travel</subject><ispartof>Parasitology research (1987), 2014-07, Vol.113 (7), p.2587-2591</ispartof><rights>Springer-Verlag Berlin Heidelberg 2014</rights><rights>COPYRIGHT 2014 Springer</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c538t-726c58bfc340db77bf084484b735d0645d9fb37eaca6668e6a923b54914ab3333</citedby><cites>FETCH-LOGICAL-c538t-726c58bfc340db77bf084484b735d0645d9fb37eaca6668e6a923b54914ab3333</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s00436-014-3911-z$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s00436-014-3911-z$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,780,784,27922,27923,41486,42555,51317</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/24770719$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Iglesias, Nuria</creatorcontrib><creatorcontrib>Subirats, Mercedes</creatorcontrib><creatorcontrib>Trevisi, Patricia</creatorcontrib><creatorcontrib>Ramírez-Olivencia, Germán</creatorcontrib><creatorcontrib>Castán, Pablo</creatorcontrib><creatorcontrib>Puente, Sabino</creatorcontrib><creatorcontrib>Toro, Carlos</creatorcontrib><title>Performance of a new gelled nested PCR test for the diagnosis of imported malaria: comparison with microscopy, rapid diagnostic test, and real-time PCR</title><title>Parasitology research (1987)</title><addtitle>Parasitol Res</addtitle><addtitle>Parasitol Res</addtitle><description>Microscopy and rapid diagnostic tests (RDTs) are the techniques commonly used for malaria diagnosis but they are usually insensitive at very low levels of parasitemia. Nested PCR is commonly used as a reference technique in the diagnosis of malaria due to its high sensitivity and specificity. However, it is a cumbersome assay only available in reference centers. We evaluated a new nested PCR-based assay, BIOMALAR kit (Biotools B&M Labs, Madrid, Spain) which employs ready-to-use gelled reagents and allows the identification of the main four species of Plasmodium. Blood samples were obtained from patients with clinical suspicion of malaria. A total of 94 subjects were studied. Fifty-two (55.3 %) of them were malaria-infected subjects corresponding to 48 cases of Plasmodium falciparum, 1 Plasmodium malariae, 2 Plasmodium vivax, and 1 Plasmodium ovale. The performance of the BIOMALAR test was compared with microscopy, rapid diagnostic test (RDT) (BinaxNOW® Malaria) and real-time quantitative PCR (qPCR). The BIOMALAR test showed a sensitivity of 98.1 % (95 % confidence interval [CI], 89.7–100), superior to microscopy (82.7 % [95 % CI, 69.7–91.8]) and RDT (94.2 % [95 % CI, 84.1–98.8]) and similar to qPCR (100 % [95 % CI, 93.2–100]). In terms of specificity, the BIOMALAR assay showed the same value as microscopy and qPCR (100 % [95 % CI, 93.2–100]). Nine subjects were submicroscopic carriers of malaria. The BIOMALAR test identified almost all of them (8/9) in comparison with RDT (6/9) and microscopy (0/9). In conclusion, the BIOMALAR is a PCR-based assay easy to use with an excellent performance and especially useful for diagnosis submicroscopic malaria.</description><subject>Adult</subject><subject>Analysis</subject><subject>Biomedical and Life Sciences</subject><subject>Biomedicine</subject><subject>blood</subject><subject>Care and treatment</subject><subject>Case-Control Studies</subject><subject>Complications and side effects</subject><subject>confidence interval</subject><subject>Development and progression</subject><subject>Diagnosis</subject><subject>diagnostic techniques</subject><subject>Diagnostic Tests, Routine</subject><subject>Female</subject><subject>Genes, rRNA</subject><subject>Humans</subject><subject>Immunology</subject><subject>Malaria</subject><subject>Malaria - diagnosis</subject><subject>Malaria - parasitology</subject><subject>Male</subject><subject>Medical Microbiology</subject><subject>Medical tests</subject><subject>Microbiology</subject><subject>Microscopy</subject><subject>Middle Aged</subject><subject>Original Paper</subject><subject>parasitemia</subject><subject>Patient outcomes</subject><subject>patients</subject><subject>Plasmodium falciparum</subject><subject>Plasmodium falciparum - genetics</subject><subject>Plasmodium falciparum - isolation & purification</subject><subject>Plasmodium malariae</subject><subject>Plasmodium malariae - genetics</subject><subject>Plasmodium malariae - isolation & purification</subject><subject>Plasmodium ovale</subject><subject>Plasmodium ovale - genetics</subject><subject>Plasmodium ovale - isolation & purification</subject><subject>Plasmodium vivax</subject><subject>Plasmodium vivax - genetics</subject><subject>Plasmodium vivax - isolation & purification</subject><subject>Polymerase Chain Reaction - methods</subject><subject>quantitative polymerase chain reaction</subject><subject>Risk factors</subject><subject>RNA, Ribosomal, 18S - genetics</subject><subject>Sensitivity and Specificity</subject><subject>Travel</subject><issn>0932-0113</issn><issn>1432-1955</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2014</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqNks9qFTEUxoMo9lp9ADcacOOiU_N3MuOuXLQKBYvadchkktuUmWRM5lLaF_F1PdNpBUHEZJFD8vvOSU4-hF5SckwJUe8KIYLXFaGi4i2l1e0jtKGCs4q2Uj5GG9JCTCjlB-hZKVeEUFUL8RQdMKEUUbTdoJ_nLvuURxOtw8ljg6O7xjs3DK6HsMywnG-_4hlCDCCeLx3ug9nFVEJZFGGcUl6w0QwmB_Me2zROEJUU8XWYL_EYbE7FpunmCGczhf4hwRzsXeIjbGKPszNDNYfRLQWfoyfeDMW9uF8P0cXHD9-3n6qzL6eftydnlZW8mSvFaiubzlsuSN8p1XnSCNGITnHZk1rIvvUdV85YU9d142rTMt5J0VJhOg7jEL1d8045_djDXfQYioXnm-jSvmgqJa1Z0zTsP1AOJRiTBNA3K7ozg9Mh-jRnYxdcn3BVtxzIhTr-CwWzd9CyFJ0PsP-HgK6CpZ8lO6-nHEaTbzQlenGEXh2hwRF6cYS-Bc2r-1vvu9H1vxUPFgCArUCBo7hzWV-lfY7Q9H9mfb2KvEna7OCz9cU3BgB4TFCwGf8FjZ3Jjw</recordid><startdate>20140701</startdate><enddate>20140701</enddate><creator>Iglesias, Nuria</creator><creator>Subirats, Mercedes</creator><creator>Trevisi, Patricia</creator><creator>Ramírez-Olivencia, Germán</creator><creator>Castán, Pablo</creator><creator>Puente, Sabino</creator><creator>Toro, Carlos</creator><general>Springer-Verlag</general><general>Springer Berlin Heidelberg</general><general>Springer</general><scope>FBQ</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>C1K</scope><scope>F1W</scope><scope>H95</scope><scope>H97</scope><scope>L.G</scope><scope>M7N</scope></search><sort><creationdate>20140701</creationdate><title>Performance of a new gelled nested PCR test for the diagnosis of imported malaria: comparison with microscopy, rapid diagnostic test, and real-time PCR</title><author>Iglesias, Nuria ; Subirats, Mercedes ; Trevisi, Patricia ; Ramírez-Olivencia, Germán ; Castán, Pablo ; Puente, Sabino ; Toro, Carlos</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c538t-726c58bfc340db77bf084484b735d0645d9fb37eaca6668e6a923b54914ab3333</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2014</creationdate><topic>Adult</topic><topic>Analysis</topic><topic>Biomedical and Life Sciences</topic><topic>Biomedicine</topic><topic>blood</topic><topic>Care and treatment</topic><topic>Case-Control Studies</topic><topic>Complications and side effects</topic><topic>confidence interval</topic><topic>Development and progression</topic><topic>Diagnosis</topic><topic>diagnostic techniques</topic><topic>Diagnostic Tests, Routine</topic><topic>Female</topic><topic>Genes, rRNA</topic><topic>Humans</topic><topic>Immunology</topic><topic>Malaria</topic><topic>Malaria - diagnosis</topic><topic>Malaria - parasitology</topic><topic>Male</topic><topic>Medical Microbiology</topic><topic>Medical tests</topic><topic>Microbiology</topic><topic>Microscopy</topic><topic>Middle Aged</topic><topic>Original Paper</topic><topic>parasitemia</topic><topic>Patient outcomes</topic><topic>patients</topic><topic>Plasmodium falciparum</topic><topic>Plasmodium falciparum - genetics</topic><topic>Plasmodium falciparum - isolation & purification</topic><topic>Plasmodium malariae</topic><topic>Plasmodium malariae - genetics</topic><topic>Plasmodium malariae - isolation & purification</topic><topic>Plasmodium ovale</topic><topic>Plasmodium ovale - genetics</topic><topic>Plasmodium ovale - isolation & purification</topic><topic>Plasmodium vivax</topic><topic>Plasmodium vivax - genetics</topic><topic>Plasmodium vivax - isolation & purification</topic><topic>Polymerase Chain Reaction - methods</topic><topic>quantitative polymerase chain reaction</topic><topic>Risk factors</topic><topic>RNA, Ribosomal, 18S - genetics</topic><topic>Sensitivity and Specificity</topic><topic>Travel</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Iglesias, Nuria</creatorcontrib><creatorcontrib>Subirats, Mercedes</creatorcontrib><creatorcontrib>Trevisi, Patricia</creatorcontrib><creatorcontrib>Ramírez-Olivencia, Germán</creatorcontrib><creatorcontrib>Castán, Pablo</creatorcontrib><creatorcontrib>Puente, Sabino</creatorcontrib><creatorcontrib>Toro, Carlos</creatorcontrib><collection>AGRIS</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 3: Aquatic Pollution & Environmental Quality</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><jtitle>Parasitology research (1987)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Iglesias, Nuria</au><au>Subirats, Mercedes</au><au>Trevisi, Patricia</au><au>Ramírez-Olivencia, Germán</au><au>Castán, Pablo</au><au>Puente, Sabino</au><au>Toro, Carlos</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Performance of a new gelled nested PCR test for the diagnosis of imported malaria: comparison with microscopy, rapid diagnostic test, and real-time PCR</atitle><jtitle>Parasitology research (1987)</jtitle><stitle>Parasitol Res</stitle><addtitle>Parasitol Res</addtitle><date>2014-07-01</date><risdate>2014</risdate><volume>113</volume><issue>7</issue><spage>2587</spage><epage>2591</epage><pages>2587-2591</pages><issn>0932-0113</issn><eissn>1432-1955</eissn><abstract>Microscopy and rapid diagnostic tests (RDTs) are the techniques commonly used for malaria diagnosis but they are usually insensitive at very low levels of parasitemia. Nested PCR is commonly used as a reference technique in the diagnosis of malaria due to its high sensitivity and specificity. However, it is a cumbersome assay only available in reference centers. We evaluated a new nested PCR-based assay, BIOMALAR kit (Biotools B&M Labs, Madrid, Spain) which employs ready-to-use gelled reagents and allows the identification of the main four species of Plasmodium. Blood samples were obtained from patients with clinical suspicion of malaria. A total of 94 subjects were studied. Fifty-two (55.3 %) of them were malaria-infected subjects corresponding to 48 cases of Plasmodium falciparum, 1 Plasmodium malariae, 2 Plasmodium vivax, and 1 Plasmodium ovale. The performance of the BIOMALAR test was compared with microscopy, rapid diagnostic test (RDT) (BinaxNOW® Malaria) and real-time quantitative PCR (qPCR). The BIOMALAR test showed a sensitivity of 98.1 % (95 % confidence interval [CI], 89.7–100), superior to microscopy (82.7 % [95 % CI, 69.7–91.8]) and RDT (94.2 % [95 % CI, 84.1–98.8]) and similar to qPCR (100 % [95 % CI, 93.2–100]). In terms of specificity, the BIOMALAR assay showed the same value as microscopy and qPCR (100 % [95 % CI, 93.2–100]). Nine subjects were submicroscopic carriers of malaria. The BIOMALAR test identified almost all of them (8/9) in comparison with RDT (6/9) and microscopy (0/9). In conclusion, the BIOMALAR is a PCR-based assay easy to use with an excellent performance and especially useful for diagnosis submicroscopic malaria.</abstract><cop>Berlin/Heidelberg</cop><pub>Springer-Verlag</pub><pmid>24770719</pmid><doi>10.1007/s00436-014-3911-z</doi><tpages>5</tpages></addata></record> |
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subjects | Adult Analysis Biomedical and Life Sciences Biomedicine blood Care and treatment Case-Control Studies Complications and side effects confidence interval Development and progression Diagnosis diagnostic techniques Diagnostic Tests, Routine Female Genes, rRNA Humans Immunology Malaria Malaria - diagnosis Malaria - parasitology Male Medical Microbiology Medical tests Microbiology Microscopy Middle Aged Original Paper parasitemia Patient outcomes patients Plasmodium falciparum Plasmodium falciparum - genetics Plasmodium falciparum - isolation & purification Plasmodium malariae Plasmodium malariae - genetics Plasmodium malariae - isolation & purification Plasmodium ovale Plasmodium ovale - genetics Plasmodium ovale - isolation & purification Plasmodium vivax Plasmodium vivax - genetics Plasmodium vivax - isolation & purification Polymerase Chain Reaction - methods quantitative polymerase chain reaction Risk factors RNA, Ribosomal, 18S - genetics Sensitivity and Specificity Travel |
title | Performance of a new gelled nested PCR test for the diagnosis of imported malaria: comparison with microscopy, rapid diagnostic test, and real-time PCR |
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