Mucin 5B promoter polymorphism is associated with idiopathic pulmonary fibrosis but not with development of lung fibrosis in systemic sclerosis or sarcoidosis
Background A polymorphism (rs35705950) 3 kb upstream of MUC5B, the gene encoding Mucin 5 subtype B, has been shown to be associated with familial and sporadic idiopathic pulmonary fibrosis (IPF). We set out to verify whether this variant is also a risk factor for fibrotic lung disease in other setti...
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creator | Stock, Carmel J Sato, Hiroe Fonseca, Carmen Banya, Winston A S Molyneaux, Philip L Adamali, Huzaifa Russell, Anne-Marie Denton, Christopher P Abraham, David J Hansell, David M Nicholson, Andrew G Maher, Toby M Wells, Athol U Lindahl, Gisela E Renzoni, Elisabetta A |
description | Background A polymorphism (rs35705950) 3 kb upstream of MUC5B, the gene encoding Mucin 5 subtype B, has been shown to be associated with familial and sporadic idiopathic pulmonary fibrosis (IPF). We set out to verify whether this variant is also a risk factor for fibrotic lung disease in other settings and to confirm the published findings in a UK Caucasian IPF population. Methods Caucasian UK healthy controls (n=416) and patients with IPF (n=110), sarcoidosis (n=180) and systemic sclerosis (SSc) (n=440) were genotyped to test for association. The SSc and sarcoidosis cohorts were subdivided according to the presence or absence of fibrotic lung disease. To assess correlation with disease progression, time to decline in forced vital capacity and/or lung carbon monoxide transfer factor was used in the IPF and SSc groups, while a persistent decline at 4 years since baseline was evaluated in patients with sarcoidosis. Results A significant association of the MUC5B promoter single nucleotide polymorphism with IPF (p=2.04×10–17; OR 4.90, 95% CI 3.42 to 7.03) was confirmed in this UK population. The MUC5B variant was not a risk factor for lung fibrosis in patients with SSc or sarcoidosis and did not predict more rapidly progressive lung disease in any of the groups. Rather, a trend for a longer time to decline in forced vital capacity was observed in patients with IPF. Conclusions We confirm the MUC5B variant association with IPF. We did not observe an association with lung fibrosis in the context of SSc or sarcoidosis, potentially highlighting fundamental differences in genetic susceptibility, although the limited subgroup numbers do not allow a definitive exclusion of an association. |
doi_str_mv | 10.1136/thoraxjnl-2012-201786 |
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We set out to verify whether this variant is also a risk factor for fibrotic lung disease in other settings and to confirm the published findings in a UK Caucasian IPF population. Methods Caucasian UK healthy controls (n=416) and patients with IPF (n=110), sarcoidosis (n=180) and systemic sclerosis (SSc) (n=440) were genotyped to test for association. The SSc and sarcoidosis cohorts were subdivided according to the presence or absence of fibrotic lung disease. To assess correlation with disease progression, time to decline in forced vital capacity and/or lung carbon monoxide transfer factor was used in the IPF and SSc groups, while a persistent decline at 4 years since baseline was evaluated in patients with sarcoidosis. Results A significant association of the MUC5B promoter single nucleotide polymorphism with IPF (p=2.04×10–17; OR 4.90, 95% CI 3.42 to 7.03) was confirmed in this UK population. The MUC5B variant was not a risk factor for lung fibrosis in patients with SSc or sarcoidosis and did not predict more rapidly progressive lung disease in any of the groups. Rather, a trend for a longer time to decline in forced vital capacity was observed in patients with IPF. Conclusions We confirm the MUC5B variant association with IPF. We did not observe an association with lung fibrosis in the context of SSc or sarcoidosis, potentially highlighting fundamental differences in genetic susceptibility, although the limited subgroup numbers do not allow a definitive exclusion of an association.</description><identifier>ISSN: 0040-6376</identifier><identifier>EISSN: 1468-3296</identifier><identifier>DOI: 10.1136/thoraxjnl-2012-201786</identifier><identifier>PMID: 23321605</identifier><identifier>CODEN: THORA7</identifier><language>eng</language><publisher>England: BMJ Publishing Group Ltd and British Thoracic Society</publisher><subject>Adolescent ; Adult ; Aged ; Aged, 80 and over ; Bronchoalveolar Lavage Fluid - chemistry ; Disease Progression ; Female ; Genes ; Genetic Predisposition to Disease ; Genotype ; Humans ; Idiopathic Pulmonary Fibrosis - complications ; Idiopathic Pulmonary Fibrosis - genetics ; Idiopathic Pulmonary Fibrosis - physiopathology ; Interstitial Fibrosis ; Lung diseases ; Lungs ; Male ; Medical prognosis ; Middle Aged ; Mucin-5B - genetics ; Mucin-5B - metabolism ; Pathogenesis ; Polymorphism, Genetic ; Promoter Regions, Genetic ; Pulmonary fibrosis ; Pulmonary Fibrosis - complications ; Pulmonary Fibrosis - genetics ; Pulmonary Fibrosis - physiopathology ; Risk Factors ; Sarcoidosis ; Sarcoidosis - complications ; Sarcoidosis - genetics ; Scleroderma, Systemic - complications ; Scleroderma, Systemic - genetics ; Studies ; Systemic disease and lungs ; Vital Capacity - genetics ; White people ; Young Adult</subject><ispartof>Thorax, 2013-05, Vol.68 (5), p.436-441</ispartof><rights>Published by the BMJ Publishing Group Limited. For permission to use (where not already granted under a licence) please go to http://group.bmj.com/group/rights-licensing/permissions</rights><rights>Copyright: 2013 Published by the BMJ Publishing Group Limited. For permission to use (where not already granted under a licence) please go to http://group.bmj.com/group/rights-licensing/permissions</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-b496t-9cbd48df87a45d5de35ed0ea0fc174e9429aecacee023c221a6979067e3cf53b3</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://thorax.bmj.com/content/68/5/436.full.pdf$$EPDF$$P50$$Gbmj$$H</linktopdf><linktohtml>$$Uhttps://thorax.bmj.com/content/68/5/436.full$$EHTML$$P50$$Gbmj$$H</linktohtml><link.rule.ids>114,115,314,780,784,3196,23571,27924,27925,77600,77631</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/23321605$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Stock, Carmel J</creatorcontrib><creatorcontrib>Sato, Hiroe</creatorcontrib><creatorcontrib>Fonseca, Carmen</creatorcontrib><creatorcontrib>Banya, Winston A S</creatorcontrib><creatorcontrib>Molyneaux, Philip L</creatorcontrib><creatorcontrib>Adamali, Huzaifa</creatorcontrib><creatorcontrib>Russell, Anne-Marie</creatorcontrib><creatorcontrib>Denton, Christopher P</creatorcontrib><creatorcontrib>Abraham, David J</creatorcontrib><creatorcontrib>Hansell, David M</creatorcontrib><creatorcontrib>Nicholson, Andrew G</creatorcontrib><creatorcontrib>Maher, Toby M</creatorcontrib><creatorcontrib>Wells, Athol U</creatorcontrib><creatorcontrib>Lindahl, Gisela E</creatorcontrib><creatorcontrib>Renzoni, Elisabetta A</creatorcontrib><title>Mucin 5B promoter polymorphism is associated with idiopathic pulmonary fibrosis but not with development of lung fibrosis in systemic sclerosis or sarcoidosis</title><title>Thorax</title><addtitle>Thorax</addtitle><description>Background A polymorphism (rs35705950) 3 kb upstream of MUC5B, the gene encoding Mucin 5 subtype B, has been shown to be associated with familial and sporadic idiopathic pulmonary fibrosis (IPF). We set out to verify whether this variant is also a risk factor for fibrotic lung disease in other settings and to confirm the published findings in a UK Caucasian IPF population. Methods Caucasian UK healthy controls (n=416) and patients with IPF (n=110), sarcoidosis (n=180) and systemic sclerosis (SSc) (n=440) were genotyped to test for association. The SSc and sarcoidosis cohorts were subdivided according to the presence or absence of fibrotic lung disease. To assess correlation with disease progression, time to decline in forced vital capacity and/or lung carbon monoxide transfer factor was used in the IPF and SSc groups, while a persistent decline at 4 years since baseline was evaluated in patients with sarcoidosis. Results A significant association of the MUC5B promoter single nucleotide polymorphism with IPF (p=2.04×10–17; OR 4.90, 95% CI 3.42 to 7.03) was confirmed in this UK population. The MUC5B variant was not a risk factor for lung fibrosis in patients with SSc or sarcoidosis and did not predict more rapidly progressive lung disease in any of the groups. Rather, a trend for a longer time to decline in forced vital capacity was observed in patients with IPF. Conclusions We confirm the MUC5B variant association with IPF. We did not observe an association with lung fibrosis in the context of SSc or sarcoidosis, potentially highlighting fundamental differences in genetic susceptibility, although the limited subgroup numbers do not allow a definitive exclusion of an association.</description><subject>Adolescent</subject><subject>Adult</subject><subject>Aged</subject><subject>Aged, 80 and over</subject><subject>Bronchoalveolar Lavage Fluid - chemistry</subject><subject>Disease Progression</subject><subject>Female</subject><subject>Genes</subject><subject>Genetic Predisposition to Disease</subject><subject>Genotype</subject><subject>Humans</subject><subject>Idiopathic Pulmonary Fibrosis - complications</subject><subject>Idiopathic Pulmonary Fibrosis - genetics</subject><subject>Idiopathic Pulmonary Fibrosis - physiopathology</subject><subject>Interstitial Fibrosis</subject><subject>Lung diseases</subject><subject>Lungs</subject><subject>Male</subject><subject>Medical prognosis</subject><subject>Middle Aged</subject><subject>Mucin-5B - genetics</subject><subject>Mucin-5B - metabolism</subject><subject>Pathogenesis</subject><subject>Polymorphism, Genetic</subject><subject>Promoter Regions, Genetic</subject><subject>Pulmonary fibrosis</subject><subject>Pulmonary Fibrosis - complications</subject><subject>Pulmonary Fibrosis - genetics</subject><subject>Pulmonary Fibrosis - physiopathology</subject><subject>Risk Factors</subject><subject>Sarcoidosis</subject><subject>Sarcoidosis - complications</subject><subject>Sarcoidosis - genetics</subject><subject>Scleroderma, Systemic - complications</subject><subject>Scleroderma, Systemic - genetics</subject><subject>Studies</subject><subject>Systemic disease and lungs</subject><subject>Vital Capacity - genetics</subject><subject>White people</subject><subject>Young Adult</subject><issn>0040-6376</issn><issn>1468-3296</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2013</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><recordid>eNqNkU2P1CAYxxujccfVj6Ah8eKlykt56VEnviXj6kHNxguh9KnD2JYuUN35Mn5WabqOiRe9QIDf8wD_X1E8JPgpIUw8S3sfzPVh7EuKCV0GqcStYkMqoUpGa3G72GBc4VIwKc6KezEeMMaKEHm3OKOMUSIw3xQ_383WjYi_QFPwg08Q0OT74-DDtHdxQC4iE6O3ziRo0Q-X9si1zk8m7Z1F09wPfjThiDrXBB8z3cwJjT6taAvfoffTAGNCvkP9PH79Q-Zr4zEmGHKjaHtYd31A0QTrXbss7xd3OtNHeHAznxefXr38uH1T7t6_frt9viubqhaprG3TVqrtlDQVb3kLjEOLweDOEllBXdHagDUWAFNmKSVG1LLGQgKzHWcNOy-erH1zClczxKQHFy30vRnBz1ETzomgFVf83yijUlKlqgV9_Bd68HMY80d0tkUUkUzhTPGVsjmBGKDTU3BDDlUTrBfX-uRaL6716jrXPbrpPjcDtKeq33IzUK6Ayylfn85N-KaFZJLri89bfbH7wNUl-6IvM49XvhkO__mGX7B0ywQ</recordid><startdate>20130501</startdate><enddate>20130501</enddate><creator>Stock, Carmel J</creator><creator>Sato, Hiroe</creator><creator>Fonseca, Carmen</creator><creator>Banya, Winston A S</creator><creator>Molyneaux, Philip L</creator><creator>Adamali, Huzaifa</creator><creator>Russell, Anne-Marie</creator><creator>Denton, Christopher P</creator><creator>Abraham, David J</creator><creator>Hansell, David M</creator><creator>Nicholson, Andrew G</creator><creator>Maher, Toby M</creator><creator>Wells, Athol U</creator><creator>Lindahl, Gisela E</creator><creator>Renzoni, Elisabetta A</creator><general>BMJ Publishing Group Ltd and British Thoracic Society</general><general>BMJ Publishing Group LTD</general><scope>BSCLL</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>BENPR</scope><scope>BTHHO</scope><scope>CCPQU</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>K9.</scope><scope>M0S</scope><scope>M1P</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>7X8</scope><scope>7T5</scope><scope>H94</scope></search><sort><creationdate>20130501</creationdate><title>Mucin 5B promoter polymorphism is associated with idiopathic pulmonary fibrosis but not with development of lung fibrosis in systemic sclerosis or sarcoidosis</title><author>Stock, Carmel J ; Sato, Hiroe ; Fonseca, Carmen ; Banya, Winston A S ; Molyneaux, Philip L ; Adamali, Huzaifa ; Russell, Anne-Marie ; Denton, Christopher P ; Abraham, David J ; Hansell, David M ; Nicholson, Andrew G ; Maher, Toby M ; Wells, Athol U ; Lindahl, Gisela E ; Renzoni, Elisabetta A</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-b496t-9cbd48df87a45d5de35ed0ea0fc174e9429aecacee023c221a6979067e3cf53b3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2013</creationdate><topic>Adolescent</topic><topic>Adult</topic><topic>Aged</topic><topic>Aged, 80 and over</topic><topic>Bronchoalveolar Lavage Fluid - chemistry</topic><topic>Disease Progression</topic><topic>Female</topic><topic>Genes</topic><topic>Genetic Predisposition to Disease</topic><topic>Genotype</topic><topic>Humans</topic><topic>Idiopathic Pulmonary Fibrosis - complications</topic><topic>Idiopathic Pulmonary Fibrosis - genetics</topic><topic>Idiopathic Pulmonary Fibrosis - physiopathology</topic><topic>Interstitial Fibrosis</topic><topic>Lung diseases</topic><topic>Lungs</topic><topic>Male</topic><topic>Medical prognosis</topic><topic>Middle Aged</topic><topic>Mucin-5B - genetics</topic><topic>Mucin-5B - metabolism</topic><topic>Pathogenesis</topic><topic>Polymorphism, Genetic</topic><topic>Promoter Regions, Genetic</topic><topic>Pulmonary fibrosis</topic><topic>Pulmonary Fibrosis - complications</topic><topic>Pulmonary Fibrosis - genetics</topic><topic>Pulmonary Fibrosis - physiopathology</topic><topic>Risk Factors</topic><topic>Sarcoidosis</topic><topic>Sarcoidosis - complications</topic><topic>Sarcoidosis - genetics</topic><topic>Scleroderma, Systemic - complications</topic><topic>Scleroderma, Systemic - genetics</topic><topic>Studies</topic><topic>Systemic disease and lungs</topic><topic>Vital Capacity - genetics</topic><topic>White people</topic><topic>Young Adult</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Stock, Carmel J</creatorcontrib><creatorcontrib>Sato, Hiroe</creatorcontrib><creatorcontrib>Fonseca, Carmen</creatorcontrib><creatorcontrib>Banya, Winston A S</creatorcontrib><creatorcontrib>Molyneaux, Philip L</creatorcontrib><creatorcontrib>Adamali, Huzaifa</creatorcontrib><creatorcontrib>Russell, Anne-Marie</creatorcontrib><creatorcontrib>Denton, Christopher P</creatorcontrib><creatorcontrib>Abraham, David J</creatorcontrib><creatorcontrib>Hansell, David M</creatorcontrib><creatorcontrib>Nicholson, Andrew G</creatorcontrib><creatorcontrib>Maher, Toby M</creatorcontrib><creatorcontrib>Wells, Athol U</creatorcontrib><creatorcontrib>Lindahl, Gisela E</creatorcontrib><creatorcontrib>Renzoni, Elisabetta A</creatorcontrib><collection>Istex</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central</collection><collection>BMJ Journals</collection><collection>ProQuest One Community College</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>MEDLINE - Academic</collection><collection>Immunology Abstracts</collection><collection>AIDS and Cancer Research Abstracts</collection><jtitle>Thorax</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Stock, Carmel J</au><au>Sato, Hiroe</au><au>Fonseca, Carmen</au><au>Banya, Winston A S</au><au>Molyneaux, Philip L</au><au>Adamali, Huzaifa</au><au>Russell, Anne-Marie</au><au>Denton, Christopher P</au><au>Abraham, David J</au><au>Hansell, David M</au><au>Nicholson, Andrew G</au><au>Maher, Toby M</au><au>Wells, Athol U</au><au>Lindahl, Gisela E</au><au>Renzoni, Elisabetta A</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Mucin 5B promoter polymorphism is associated with idiopathic pulmonary fibrosis but not with development of lung fibrosis in systemic sclerosis or sarcoidosis</atitle><jtitle>Thorax</jtitle><addtitle>Thorax</addtitle><date>2013-05-01</date><risdate>2013</risdate><volume>68</volume><issue>5</issue><spage>436</spage><epage>441</epage><pages>436-441</pages><issn>0040-6376</issn><eissn>1468-3296</eissn><coden>THORA7</coden><abstract>Background A polymorphism (rs35705950) 3 kb upstream of MUC5B, the gene encoding Mucin 5 subtype B, has been shown to be associated with familial and sporadic idiopathic pulmonary fibrosis (IPF). We set out to verify whether this variant is also a risk factor for fibrotic lung disease in other settings and to confirm the published findings in a UK Caucasian IPF population. Methods Caucasian UK healthy controls (n=416) and patients with IPF (n=110), sarcoidosis (n=180) and systemic sclerosis (SSc) (n=440) were genotyped to test for association. The SSc and sarcoidosis cohorts were subdivided according to the presence or absence of fibrotic lung disease. To assess correlation with disease progression, time to decline in forced vital capacity and/or lung carbon monoxide transfer factor was used in the IPF and SSc groups, while a persistent decline at 4 years since baseline was evaluated in patients with sarcoidosis. Results A significant association of the MUC5B promoter single nucleotide polymorphism with IPF (p=2.04×10–17; OR 4.90, 95% CI 3.42 to 7.03) was confirmed in this UK population. The MUC5B variant was not a risk factor for lung fibrosis in patients with SSc or sarcoidosis and did not predict more rapidly progressive lung disease in any of the groups. Rather, a trend for a longer time to decline in forced vital capacity was observed in patients with IPF. Conclusions We confirm the MUC5B variant association with IPF. We did not observe an association with lung fibrosis in the context of SSc or sarcoidosis, potentially highlighting fundamental differences in genetic susceptibility, although the limited subgroup numbers do not allow a definitive exclusion of an association.</abstract><cop>England</cop><pub>BMJ Publishing Group Ltd and British Thoracic Society</pub><pmid>23321605</pmid><doi>10.1136/thoraxjnl-2012-201786</doi><tpages>6</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Adolescent Adult Aged Aged, 80 and over Bronchoalveolar Lavage Fluid - chemistry Disease Progression Female Genes Genetic Predisposition to Disease Genotype Humans Idiopathic Pulmonary Fibrosis - complications Idiopathic Pulmonary Fibrosis - genetics Idiopathic Pulmonary Fibrosis - physiopathology Interstitial Fibrosis Lung diseases Lungs Male Medical prognosis Middle Aged Mucin-5B - genetics Mucin-5B - metabolism Pathogenesis Polymorphism, Genetic Promoter Regions, Genetic Pulmonary fibrosis Pulmonary Fibrosis - complications Pulmonary Fibrosis - genetics Pulmonary Fibrosis - physiopathology Risk Factors Sarcoidosis Sarcoidosis - complications Sarcoidosis - genetics Scleroderma, Systemic - complications Scleroderma, Systemic - genetics Studies Systemic disease and lungs Vital Capacity - genetics White people Young Adult |
title | Mucin 5B promoter polymorphism is associated with idiopathic pulmonary fibrosis but not with development of lung fibrosis in systemic sclerosis or sarcoidosis |
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