Stochastic simulation of prokaryotic two-component signalling indicates stochasticity-induced active-state locking and growth-rate dependent bistability

Signal transduction by prokaryotes almost exclusively relies on two-component systems for sensing and responding to (extracellular) signals. Here, we use stochastic models of two-component systems to better understand the impact of stochasticity on the fidelity and robustness of signal transmission,...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Molecular bioSystems 2014-01, Vol.10 (9), p.2338-2346
Hauptverfasser: Wei, Katy, Moinat, Maxim, Maarleveld, Timo R, Bruggeman, Frank J
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page 2346
container_issue 9
container_start_page 2338
container_title Molecular bioSystems
container_volume 10
creator Wei, Katy
Moinat, Maxim
Maarleveld, Timo R
Bruggeman, Frank J
description Signal transduction by prokaryotes almost exclusively relies on two-component systems for sensing and responding to (extracellular) signals. Here, we use stochastic models of two-component systems to better understand the impact of stochasticity on the fidelity and robustness of signal transmission, the outcome of autoregulatory gene expression and the influence of cell growth and division. We report that two-component systems are remarkably robust against copy number fluctuations of the signalling proteins they are composed of, which enhances signal transmission fidelity. Furthermore, we find that due to stochasticity these systems can get locked in an active state for extended time periods when (initially high) signal levels drop to zero. This behaviour can contribute to a bet-hedging adaptation strategy, aiding survival in fluctuating environments. Additionally, autoregulatory gene expression can cause two-component systems to become bistable at realistic parameter values. As a result, two sub-populations of cells can co-exist-active and inactive cells, which contributes to fitness in unpredictable environments. Bistability proved robust with respect to cell growth and division, and is tunable by the growth rate. In conclusion, our results indicate how single cells can cope with the inevitable stochasticity occurring in the activity of their two-component systems. They are robust to disadvantageous fluctuations that scramble signal transduction and they exploit beneficial stochasticity that generates fitness-enhancing heterogeneity across an isogenic population of cells.
doi_str_mv 10.1039/c4mb00264d
format Article
fullrecord <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_1550077867</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>1550077867</sourcerecordid><originalsourceid>FETCH-LOGICAL-c323t-b100108332612ec7cd0b6b3822c689a2a9466080b594ab39471301c5cdfae1213</originalsourceid><addsrcrecordid>eNo9kclOwzAQQC0EoqVw4QNQjggpMF6yHaGsEogDIHGLvLU1JHaJHRB_wufi0NLTjGbePGlmEDrEcIqBVmeStQKA5ExtoTEuGEkJZHh7k-evI7Tn_RsALRmGXTQirMqyipZj9PMUnFxwH4xMvGn7hgfjbOJmybJz77z7dkMnfLlUunbprLYhcnPLm8bYeWKsMpIH7RO_8ZjwncZ6L7VKuAzmU6c-RCZpnHwfhrhVybxzX2GRdkNd6aW2ajALE0lhmqjYRzsz3nh9sI4T9HJ99Ty9Te8fb-6m5_eppISGVGAADCWlJMdEy0IqELmgJSEyLytOeMXyHEoQWcW4oBUrMAUsM6lmXGOC6QQdr7xx349e-1C3xkvdNNxq1_saZxlAUZR5EdGTFSo7532nZ_WyM228UY2hHj5RT9nDxd8nLiN8tPb2otVqg_6fnv4C7XOH1Q</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>1550077867</pqid></control><display><type>article</type><title>Stochastic simulation of prokaryotic two-component signalling indicates stochasticity-induced active-state locking and growth-rate dependent bistability</title><source>MEDLINE</source><source>Royal Society Of Chemistry Journals 2008-</source><source>Alma/SFX Local Collection</source><creator>Wei, Katy ; Moinat, Maxim ; Maarleveld, Timo R ; Bruggeman, Frank J</creator><creatorcontrib>Wei, Katy ; Moinat, Maxim ; Maarleveld, Timo R ; Bruggeman, Frank J</creatorcontrib><description>Signal transduction by prokaryotes almost exclusively relies on two-component systems for sensing and responding to (extracellular) signals. Here, we use stochastic models of two-component systems to better understand the impact of stochasticity on the fidelity and robustness of signal transmission, the outcome of autoregulatory gene expression and the influence of cell growth and division. We report that two-component systems are remarkably robust against copy number fluctuations of the signalling proteins they are composed of, which enhances signal transmission fidelity. Furthermore, we find that due to stochasticity these systems can get locked in an active state for extended time periods when (initially high) signal levels drop to zero. This behaviour can contribute to a bet-hedging adaptation strategy, aiding survival in fluctuating environments. Additionally, autoregulatory gene expression can cause two-component systems to become bistable at realistic parameter values. As a result, two sub-populations of cells can co-exist-active and inactive cells, which contributes to fitness in unpredictable environments. Bistability proved robust with respect to cell growth and division, and is tunable by the growth rate. In conclusion, our results indicate how single cells can cope with the inevitable stochasticity occurring in the activity of their two-component systems. They are robust to disadvantageous fluctuations that scramble signal transduction and they exploit beneficial stochasticity that generates fitness-enhancing heterogeneity across an isogenic population of cells.</description><identifier>ISSN: 1742-206X</identifier><identifier>EISSN: 1742-2051</identifier><identifier>DOI: 10.1039/c4mb00264d</identifier><identifier>PMID: 24955938</identifier><language>eng</language><publisher>England</publisher><subject>Adaptation, Physiological - physiology ; Cell Cycle - physiology ; Cell Proliferation - physiology ; Environment ; Gene Expression - physiology ; Models, Statistical ; Prokaryotic Cells - metabolism ; Prokaryotic Cells - physiology ; Proteins - metabolism ; Signal Transduction - physiology ; Stochastic Processes</subject><ispartof>Molecular bioSystems, 2014-01, Vol.10 (9), p.2338-2346</ispartof><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c323t-b100108332612ec7cd0b6b3822c689a2a9466080b594ab39471301c5cdfae1213</citedby><cites>FETCH-LOGICAL-c323t-b100108332612ec7cd0b6b3822c689a2a9466080b594ab39471301c5cdfae1213</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,27901,27902</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/24955938$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Wei, Katy</creatorcontrib><creatorcontrib>Moinat, Maxim</creatorcontrib><creatorcontrib>Maarleveld, Timo R</creatorcontrib><creatorcontrib>Bruggeman, Frank J</creatorcontrib><title>Stochastic simulation of prokaryotic two-component signalling indicates stochasticity-induced active-state locking and growth-rate dependent bistability</title><title>Molecular bioSystems</title><addtitle>Mol Biosyst</addtitle><description>Signal transduction by prokaryotes almost exclusively relies on two-component systems for sensing and responding to (extracellular) signals. Here, we use stochastic models of two-component systems to better understand the impact of stochasticity on the fidelity and robustness of signal transmission, the outcome of autoregulatory gene expression and the influence of cell growth and division. We report that two-component systems are remarkably robust against copy number fluctuations of the signalling proteins they are composed of, which enhances signal transmission fidelity. Furthermore, we find that due to stochasticity these systems can get locked in an active state for extended time periods when (initially high) signal levels drop to zero. This behaviour can contribute to a bet-hedging adaptation strategy, aiding survival in fluctuating environments. Additionally, autoregulatory gene expression can cause two-component systems to become bistable at realistic parameter values. As a result, two sub-populations of cells can co-exist-active and inactive cells, which contributes to fitness in unpredictable environments. Bistability proved robust with respect to cell growth and division, and is tunable by the growth rate. In conclusion, our results indicate how single cells can cope with the inevitable stochasticity occurring in the activity of their two-component systems. They are robust to disadvantageous fluctuations that scramble signal transduction and they exploit beneficial stochasticity that generates fitness-enhancing heterogeneity across an isogenic population of cells.</description><subject>Adaptation, Physiological - physiology</subject><subject>Cell Cycle - physiology</subject><subject>Cell Proliferation - physiology</subject><subject>Environment</subject><subject>Gene Expression - physiology</subject><subject>Models, Statistical</subject><subject>Prokaryotic Cells - metabolism</subject><subject>Prokaryotic Cells - physiology</subject><subject>Proteins - metabolism</subject><subject>Signal Transduction - physiology</subject><subject>Stochastic Processes</subject><issn>1742-206X</issn><issn>1742-2051</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2014</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNo9kclOwzAQQC0EoqVw4QNQjggpMF6yHaGsEogDIHGLvLU1JHaJHRB_wufi0NLTjGbePGlmEDrEcIqBVmeStQKA5ExtoTEuGEkJZHh7k-evI7Tn_RsALRmGXTQirMqyipZj9PMUnFxwH4xMvGn7hgfjbOJmybJz77z7dkMnfLlUunbprLYhcnPLm8bYeWKsMpIH7RO_8ZjwncZ6L7VKuAzmU6c-RCZpnHwfhrhVybxzX2GRdkNd6aW2ajALE0lhmqjYRzsz3nh9sI4T9HJ99Ty9Te8fb-6m5_eppISGVGAADCWlJMdEy0IqELmgJSEyLytOeMXyHEoQWcW4oBUrMAUsM6lmXGOC6QQdr7xx349e-1C3xkvdNNxq1_saZxlAUZR5EdGTFSo7532nZ_WyM228UY2hHj5RT9nDxd8nLiN8tPb2otVqg_6fnv4C7XOH1Q</recordid><startdate>20140101</startdate><enddate>20140101</enddate><creator>Wei, Katy</creator><creator>Moinat, Maxim</creator><creator>Maarleveld, Timo R</creator><creator>Bruggeman, Frank J</creator><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>20140101</creationdate><title>Stochastic simulation of prokaryotic two-component signalling indicates stochasticity-induced active-state locking and growth-rate dependent bistability</title><author>Wei, Katy ; Moinat, Maxim ; Maarleveld, Timo R ; Bruggeman, Frank J</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c323t-b100108332612ec7cd0b6b3822c689a2a9466080b594ab39471301c5cdfae1213</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2014</creationdate><topic>Adaptation, Physiological - physiology</topic><topic>Cell Cycle - physiology</topic><topic>Cell Proliferation - physiology</topic><topic>Environment</topic><topic>Gene Expression - physiology</topic><topic>Models, Statistical</topic><topic>Prokaryotic Cells - metabolism</topic><topic>Prokaryotic Cells - physiology</topic><topic>Proteins - metabolism</topic><topic>Signal Transduction - physiology</topic><topic>Stochastic Processes</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Wei, Katy</creatorcontrib><creatorcontrib>Moinat, Maxim</creatorcontrib><creatorcontrib>Maarleveld, Timo R</creatorcontrib><creatorcontrib>Bruggeman, Frank J</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Molecular bioSystems</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Wei, Katy</au><au>Moinat, Maxim</au><au>Maarleveld, Timo R</au><au>Bruggeman, Frank J</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Stochastic simulation of prokaryotic two-component signalling indicates stochasticity-induced active-state locking and growth-rate dependent bistability</atitle><jtitle>Molecular bioSystems</jtitle><addtitle>Mol Biosyst</addtitle><date>2014-01-01</date><risdate>2014</risdate><volume>10</volume><issue>9</issue><spage>2338</spage><epage>2346</epage><pages>2338-2346</pages><issn>1742-206X</issn><eissn>1742-2051</eissn><abstract>Signal transduction by prokaryotes almost exclusively relies on two-component systems for sensing and responding to (extracellular) signals. Here, we use stochastic models of two-component systems to better understand the impact of stochasticity on the fidelity and robustness of signal transmission, the outcome of autoregulatory gene expression and the influence of cell growth and division. We report that two-component systems are remarkably robust against copy number fluctuations of the signalling proteins they are composed of, which enhances signal transmission fidelity. Furthermore, we find that due to stochasticity these systems can get locked in an active state for extended time periods when (initially high) signal levels drop to zero. This behaviour can contribute to a bet-hedging adaptation strategy, aiding survival in fluctuating environments. Additionally, autoregulatory gene expression can cause two-component systems to become bistable at realistic parameter values. As a result, two sub-populations of cells can co-exist-active and inactive cells, which contributes to fitness in unpredictable environments. Bistability proved robust with respect to cell growth and division, and is tunable by the growth rate. In conclusion, our results indicate how single cells can cope with the inevitable stochasticity occurring in the activity of their two-component systems. They are robust to disadvantageous fluctuations that scramble signal transduction and they exploit beneficial stochasticity that generates fitness-enhancing heterogeneity across an isogenic population of cells.</abstract><cop>England</cop><pmid>24955938</pmid><doi>10.1039/c4mb00264d</doi><tpages>9</tpages><oa>free_for_read</oa></addata></record>
fulltext fulltext
identifier ISSN: 1742-206X
ispartof Molecular bioSystems, 2014-01, Vol.10 (9), p.2338-2346
issn 1742-206X
1742-2051
language eng
recordid cdi_proquest_miscellaneous_1550077867
source MEDLINE; Royal Society Of Chemistry Journals 2008-; Alma/SFX Local Collection
subjects Adaptation, Physiological - physiology
Cell Cycle - physiology
Cell Proliferation - physiology
Environment
Gene Expression - physiology
Models, Statistical
Prokaryotic Cells - metabolism
Prokaryotic Cells - physiology
Proteins - metabolism
Signal Transduction - physiology
Stochastic Processes
title Stochastic simulation of prokaryotic two-component signalling indicates stochasticity-induced active-state locking and growth-rate dependent bistability
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-02-19T03%3A49%3A48IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Stochastic%20simulation%20of%20prokaryotic%20two-component%20signalling%20indicates%20stochasticity-induced%20active-state%20locking%20and%20growth-rate%20dependent%20bistability&rft.jtitle=Molecular%20bioSystems&rft.au=Wei,%20Katy&rft.date=2014-01-01&rft.volume=10&rft.issue=9&rft.spage=2338&rft.epage=2346&rft.pages=2338-2346&rft.issn=1742-206X&rft.eissn=1742-2051&rft_id=info:doi/10.1039/c4mb00264d&rft_dat=%3Cproquest_cross%3E1550077867%3C/proquest_cross%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=1550077867&rft_id=info:pmid/24955938&rfr_iscdi=true