Uml2 is a novel CalB-type lipase of Ustilago maydis with phospholipase A activity
CalB of Pseudozyma aphidis (formerly named Candida antarctica ) is one of the most widely applied enzymes in industrial biocatalysis. Here, we describe a protein with 66 % sequence identity to CalB, designated Ustilago maydis lipase 2 (Uml2), which was identified as the product of gene um01422 of th...
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creator | Buerth, Christoph Kovacic, Filip Stock, Janpeter Terfrüchte, Marius Wilhelm, Susanne Jaeger, Karl-Erich Feldbrügge, Michael Schipper, Kerstin Ernst, Joachim F. Tielker, Denis |
description | CalB of
Pseudozyma aphidis
(formerly named
Candida antarctica
) is one of the most widely applied enzymes in industrial biocatalysis. Here, we describe a protein with 66 % sequence identity to CalB, designated
Ustilago maydis
lipase 2 (Uml2), which was identified as the product of gene
um01422
of the corn smut fungus
U. maydis
. Sequence analysis of Uml2 revealed the presence of a typical lipase catalytic triad, Ser-His-Asp with Ser125 located in a Thr-Xaa-Ser-Xaa-Gly pentapeptide. Deletion of the
uml2
gene in
U. maydis
diminished the ability of cells to hydrolyse fatty acids from tributyrin or Tween 20/80 substrates, thus demonstrating that Uml2 functions as a lipase that may contribute to nutrition of this fungal pathogen. Uml2 was heterologously produced in
Pichia pastoris
and recombinant
N
-glycosylated Uml2 protein was purified from the culture medium. Purified Uml2 released short- and long-chain fatty acids from
p
-nitrophenyl esters and Tween 20/80 substrates. Furthermore, phosphatidylcholine substrates containing long-chain saturated or unsaturated fatty acids were effectively hydrolysed. Both esterase and phospholipase A activity of Uml2 depended on the Ser125 catalytic residue. These results indicate that Uml2, in contrast to CalB, exhibits not only esterase and lipase activity but also phospholipase A activity. Thus, by genome mining, we identified a novel CalB-like lipase with different substrate specificities. |
doi_str_mv | 10.1007/s00253-013-5493-6 |
format | Article |
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Pseudozyma aphidis
(formerly named
Candida antarctica
) is one of the most widely applied enzymes in industrial biocatalysis. Here, we describe a protein with 66 % sequence identity to CalB, designated
Ustilago maydis
lipase 2 (Uml2), which was identified as the product of gene
um01422
of the corn smut fungus
U. maydis
. Sequence analysis of Uml2 revealed the presence of a typical lipase catalytic triad, Ser-His-Asp with Ser125 located in a Thr-Xaa-Ser-Xaa-Gly pentapeptide. Deletion of the
uml2
gene in
U. maydis
diminished the ability of cells to hydrolyse fatty acids from tributyrin or Tween 20/80 substrates, thus demonstrating that Uml2 functions as a lipase that may contribute to nutrition of this fungal pathogen. Uml2 was heterologously produced in
Pichia pastoris
and recombinant
N
-glycosylated Uml2 protein was purified from the culture medium. Purified Uml2 released short- and long-chain fatty acids from
p
-nitrophenyl esters and Tween 20/80 substrates. Furthermore, phosphatidylcholine substrates containing long-chain saturated or unsaturated fatty acids were effectively hydrolysed. Both esterase and phospholipase A activity of Uml2 depended on the Ser125 catalytic residue. These results indicate that Uml2, in contrast to CalB, exhibits not only esterase and lipase activity but also phospholipase A activity. Thus, by genome mining, we identified a novel CalB-like lipase with different substrate specificities.</description><identifier>ISSN: 0175-7598</identifier><identifier>EISSN: 1432-0614</identifier><identifier>DOI: 10.1007/s00253-013-5493-6</identifier><identifier>PMID: 24469105</identifier><language>eng</language><publisher>Berlin/Heidelberg: Springer Berlin Heidelberg</publisher><subject>Amino Acid Motifs ; Analysis ; Biomedical and Life Sciences ; Biotechnologically Relevant Enzymes and Proteins ; Biotechnology ; Candida antarctica ; Catalytic Domain ; Cloning, Molecular ; DNA Mutational Analysis ; Enzymes ; Esters ; Fatty acids ; Fungi ; Gene Deletion ; Gene Expression ; Genetic aspects ; Genetic recombination ; Genomes ; Life Sciences ; Lipase ; Microbial Genetics and Genomics ; Microbiology ; Pathogens ; Phospholipases - genetics ; Phospholipases - metabolism ; Physiological aspects ; Pichia - genetics ; Pichia - metabolism ; Pichia pastoris ; Proteins ; Pseudozyma ; Recombinant Proteins - genetics ; Recombinant Proteins - isolation & purification ; Recombinant Proteins - metabolism ; Sequence Analysis, DNA ; Smut fungi ; Studies ; Substrate Specificity ; Substrates ; Ustilago - enzymology ; Ustilago - genetics ; Ustilago maydis ; Yeast</subject><ispartof>Applied microbiology and biotechnology, 2014-06, Vol.98 (11), p.4963-4973</ispartof><rights>Springer-Verlag Berlin Heidelberg 2014</rights><rights>COPYRIGHT 2014 Springer</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c543t-313750d9e8e3813abc8ade5c927d02ba3573279ee89d47de1b6cb0ad7e5f69123</citedby><cites>FETCH-LOGICAL-c543t-313750d9e8e3813abc8ade5c927d02ba3573279ee89d47de1b6cb0ad7e5f69123</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s00253-013-5493-6$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s00253-013-5493-6$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,776,780,27901,27902,41464,42533,51294</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/24469105$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Buerth, Christoph</creatorcontrib><creatorcontrib>Kovacic, Filip</creatorcontrib><creatorcontrib>Stock, Janpeter</creatorcontrib><creatorcontrib>Terfrüchte, Marius</creatorcontrib><creatorcontrib>Wilhelm, Susanne</creatorcontrib><creatorcontrib>Jaeger, Karl-Erich</creatorcontrib><creatorcontrib>Feldbrügge, Michael</creatorcontrib><creatorcontrib>Schipper, Kerstin</creatorcontrib><creatorcontrib>Ernst, Joachim F.</creatorcontrib><creatorcontrib>Tielker, Denis</creatorcontrib><title>Uml2 is a novel CalB-type lipase of Ustilago maydis with phospholipase A activity</title><title>Applied microbiology and biotechnology</title><addtitle>Appl Microbiol Biotechnol</addtitle><addtitle>Appl Microbiol Biotechnol</addtitle><description>CalB of
Pseudozyma aphidis
(formerly named
Candida antarctica
) is one of the most widely applied enzymes in industrial biocatalysis. Here, we describe a protein with 66 % sequence identity to CalB, designated
Ustilago maydis
lipase 2 (Uml2), which was identified as the product of gene
um01422
of the corn smut fungus
U. maydis
. Sequence analysis of Uml2 revealed the presence of a typical lipase catalytic triad, Ser-His-Asp with Ser125 located in a Thr-Xaa-Ser-Xaa-Gly pentapeptide. Deletion of the
uml2
gene in
U. maydis
diminished the ability of cells to hydrolyse fatty acids from tributyrin or Tween 20/80 substrates, thus demonstrating that Uml2 functions as a lipase that may contribute to nutrition of this fungal pathogen. Uml2 was heterologously produced in
Pichia pastoris
and recombinant
N
-glycosylated Uml2 protein was purified from the culture medium. Purified Uml2 released short- and long-chain fatty acids from
p
-nitrophenyl esters and Tween 20/80 substrates. Furthermore, phosphatidylcholine substrates containing long-chain saturated or unsaturated fatty acids were effectively hydrolysed. Both esterase and phospholipase A activity of Uml2 depended on the Ser125 catalytic residue. These results indicate that Uml2, in contrast to CalB, exhibits not only esterase and lipase activity but also phospholipase A activity. Thus, by genome mining, we identified a novel CalB-like lipase with different substrate specificities.</description><subject>Amino Acid Motifs</subject><subject>Analysis</subject><subject>Biomedical and Life Sciences</subject><subject>Biotechnologically Relevant Enzymes and Proteins</subject><subject>Biotechnology</subject><subject>Candida antarctica</subject><subject>Catalytic Domain</subject><subject>Cloning, Molecular</subject><subject>DNA Mutational Analysis</subject><subject>Enzymes</subject><subject>Esters</subject><subject>Fatty acids</subject><subject>Fungi</subject><subject>Gene Deletion</subject><subject>Gene Expression</subject><subject>Genetic aspects</subject><subject>Genetic recombination</subject><subject>Genomes</subject><subject>Life Sciences</subject><subject>Lipase</subject><subject>Microbial Genetics and Genomics</subject><subject>Microbiology</subject><subject>Pathogens</subject><subject>Phospholipases - genetics</subject><subject>Phospholipases - metabolism</subject><subject>Physiological aspects</subject><subject>Pichia - genetics</subject><subject>Pichia - metabolism</subject><subject>Pichia pastoris</subject><subject>Proteins</subject><subject>Pseudozyma</subject><subject>Recombinant Proteins - genetics</subject><subject>Recombinant Proteins - isolation & purification</subject><subject>Recombinant Proteins - metabolism</subject><subject>Sequence Analysis, DNA</subject><subject>Smut fungi</subject><subject>Studies</subject><subject>Substrate Specificity</subject><subject>Substrates</subject><subject>Ustilago - enzymology</subject><subject>Ustilago - genetics</subject><subject>Ustilago maydis</subject><subject>Yeast</subject><issn>0175-7598</issn><issn>1432-0614</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2014</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>BENPR</sourceid><recordid>eNqNktuL1DAYxYMo7rj6B_giAV_0oWuuTfI4O3hZWBAv8xzS9utslrapTbo6_70pM15GFCSEwJffOXwHDkJPKbmghKhXkRAmeUEoL6QwvCjvoRUVnBWkpOI-WhGqZKGk0WfoUYy3hFCmy_IhOmNClIYSuUIftn3HsI_Y4SHcQYc3rrss0n4E3PnRRcChxduYfOd2Afdu32T2q083eLwJMd8jtcauTv7Op_1j9KB1XYQnx_ccbd-8_rx5V1y_f3u1WV8XtRQ8FZxyJUljQAPXlLuq1q4BWRumGsIqx6XiTBkAbRqhGqBVWVfENQpkm3dn_By9OPiOU_gyQ0y297GGrnMDhDlaKrnQwhit_wNlJeVcszKjz_9Ab8M8DTnIQklGtVD6F7VzHVg_tCFNrl5M7Zorwo0Uctnw4i9UPg30vg4DtD7PTwQvTwSZSfAt7dwco7369PGUpQe2nkKME7R2nHzvpr2lxC7tsId22NwOu7TDLuGeHcPNVQ_NT8WPOmSAHYCYv4YdTL-l_6frdyT7wA8</recordid><startdate>20140601</startdate><enddate>20140601</enddate><creator>Buerth, Christoph</creator><creator>Kovacic, Filip</creator><creator>Stock, Janpeter</creator><creator>Terfrüchte, Marius</creator><creator>Wilhelm, Susanne</creator><creator>Jaeger, Karl-Erich</creator><creator>Feldbrügge, Michael</creator><creator>Schipper, Kerstin</creator><creator>Ernst, Joachim F.</creator><creator>Tielker, Denis</creator><general>Springer Berlin Heidelberg</general><general>Springer</general><general>Springer Nature B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>ISR</scope><scope>3V.</scope><scope>7QL</scope><scope>7T7</scope><scope>7WY</scope><scope>7WZ</scope><scope>7X7</scope><scope>7XB</scope><scope>87Z</scope><scope>88A</scope><scope>88E</scope><scope>88I</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>8FL</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BEZIV</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FRNLG</scope><scope>FYUFA</scope><scope>F~G</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>K60</scope><scope>K6~</scope><scope>K9.</scope><scope>L.-</scope><scope>LK8</scope><scope>M0C</scope><scope>M0S</scope><scope>M1P</scope><scope>M2P</scope><scope>M7N</scope><scope>M7P</scope><scope>P64</scope><scope>PQBIZ</scope><scope>PQBZA</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>Q9U</scope><scope>7X8</scope><scope>7QO</scope></search><sort><creationdate>20140601</creationdate><title>Uml2 is a novel CalB-type lipase of Ustilago maydis with phospholipase A activity</title><author>Buerth, Christoph ; Kovacic, Filip ; Stock, Janpeter ; Terfrüchte, Marius ; Wilhelm, Susanne ; Jaeger, Karl-Erich ; Feldbrügge, Michael ; Schipper, Kerstin ; Ernst, Joachim F. ; Tielker, Denis</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c543t-313750d9e8e3813abc8ade5c927d02ba3573279ee89d47de1b6cb0ad7e5f69123</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2014</creationdate><topic>Amino Acid Motifs</topic><topic>Analysis</topic><topic>Biomedical and Life Sciences</topic><topic>Biotechnologically Relevant Enzymes and Proteins</topic><topic>Biotechnology</topic><topic>Candida antarctica</topic><topic>Catalytic Domain</topic><topic>Cloning, Molecular</topic><topic>DNA Mutational Analysis</topic><topic>Enzymes</topic><topic>Esters</topic><topic>Fatty acids</topic><topic>Fungi</topic><topic>Gene Deletion</topic><topic>Gene Expression</topic><topic>Genetic aspects</topic><topic>Genetic recombination</topic><topic>Genomes</topic><topic>Life Sciences</topic><topic>Lipase</topic><topic>Microbial Genetics and Genomics</topic><topic>Microbiology</topic><topic>Pathogens</topic><topic>Phospholipases - genetics</topic><topic>Phospholipases - metabolism</topic><topic>Physiological aspects</topic><topic>Pichia - genetics</topic><topic>Pichia - metabolism</topic><topic>Pichia pastoris</topic><topic>Proteins</topic><topic>Pseudozyma</topic><topic>Recombinant Proteins - genetics</topic><topic>Recombinant Proteins - isolation & purification</topic><topic>Recombinant Proteins - metabolism</topic><topic>Sequence Analysis, DNA</topic><topic>Smut fungi</topic><topic>Studies</topic><topic>Substrate Specificity</topic><topic>Substrates</topic><topic>Ustilago - enzymology</topic><topic>Ustilago - genetics</topic><topic>Ustilago maydis</topic><topic>Yeast</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Buerth, Christoph</creatorcontrib><creatorcontrib>Kovacic, Filip</creatorcontrib><creatorcontrib>Stock, Janpeter</creatorcontrib><creatorcontrib>Terfrüchte, Marius</creatorcontrib><creatorcontrib>Wilhelm, Susanne</creatorcontrib><creatorcontrib>Jaeger, Karl-Erich</creatorcontrib><creatorcontrib>Feldbrügge, Michael</creatorcontrib><creatorcontrib>Schipper, Kerstin</creatorcontrib><creatorcontrib>Ernst, Joachim F.</creatorcontrib><creatorcontrib>Tielker, Denis</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Gale In Context: Science</collection><collection>ProQuest Central (Corporate)</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>ABI/INFORM Collection</collection><collection>ABI/INFORM Global (PDF only)</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>ABI/INFORM Global (Alumni Edition)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Science Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ABI/INFORM Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Business Premium Collection</collection><collection>Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Business Premium Collection (Alumni)</collection><collection>Health Research Premium Collection</collection><collection>ABI/INFORM Global (Corporate)</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Business Collection (Alumni Edition)</collection><collection>ProQuest Business Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ABI/INFORM Professional Advanced</collection><collection>ProQuest Biological Science Collection</collection><collection>ABI/INFORM Global</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Science Database</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biological Science Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Business</collection><collection>ProQuest One Business (Alumni)</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central Basic</collection><collection>MEDLINE - Academic</collection><collection>Biotechnology Research Abstracts</collection><jtitle>Applied microbiology and biotechnology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Buerth, Christoph</au><au>Kovacic, Filip</au><au>Stock, Janpeter</au><au>Terfrüchte, Marius</au><au>Wilhelm, Susanne</au><au>Jaeger, Karl-Erich</au><au>Feldbrügge, Michael</au><au>Schipper, Kerstin</au><au>Ernst, Joachim F.</au><au>Tielker, Denis</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Uml2 is a novel CalB-type lipase of Ustilago maydis with phospholipase A activity</atitle><jtitle>Applied microbiology and biotechnology</jtitle><stitle>Appl Microbiol Biotechnol</stitle><addtitle>Appl Microbiol Biotechnol</addtitle><date>2014-06-01</date><risdate>2014</risdate><volume>98</volume><issue>11</issue><spage>4963</spage><epage>4973</epage><pages>4963-4973</pages><issn>0175-7598</issn><eissn>1432-0614</eissn><abstract>CalB of
Pseudozyma aphidis
(formerly named
Candida antarctica
) is one of the most widely applied enzymes in industrial biocatalysis. Here, we describe a protein with 66 % sequence identity to CalB, designated
Ustilago maydis
lipase 2 (Uml2), which was identified as the product of gene
um01422
of the corn smut fungus
U. maydis
. Sequence analysis of Uml2 revealed the presence of a typical lipase catalytic triad, Ser-His-Asp with Ser125 located in a Thr-Xaa-Ser-Xaa-Gly pentapeptide. Deletion of the
uml2
gene in
U. maydis
diminished the ability of cells to hydrolyse fatty acids from tributyrin or Tween 20/80 substrates, thus demonstrating that Uml2 functions as a lipase that may contribute to nutrition of this fungal pathogen. Uml2 was heterologously produced in
Pichia pastoris
and recombinant
N
-glycosylated Uml2 protein was purified from the culture medium. Purified Uml2 released short- and long-chain fatty acids from
p
-nitrophenyl esters and Tween 20/80 substrates. Furthermore, phosphatidylcholine substrates containing long-chain saturated or unsaturated fatty acids were effectively hydrolysed. Both esterase and phospholipase A activity of Uml2 depended on the Ser125 catalytic residue. These results indicate that Uml2, in contrast to CalB, exhibits not only esterase and lipase activity but also phospholipase A activity. Thus, by genome mining, we identified a novel CalB-like lipase with different substrate specificities.</abstract><cop>Berlin/Heidelberg</cop><pub>Springer Berlin Heidelberg</pub><pmid>24469105</pmid><doi>10.1007/s00253-013-5493-6</doi><tpages>11</tpages></addata></record> |
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subjects | Amino Acid Motifs Analysis Biomedical and Life Sciences Biotechnologically Relevant Enzymes and Proteins Biotechnology Candida antarctica Catalytic Domain Cloning, Molecular DNA Mutational Analysis Enzymes Esters Fatty acids Fungi Gene Deletion Gene Expression Genetic aspects Genetic recombination Genomes Life Sciences Lipase Microbial Genetics and Genomics Microbiology Pathogens Phospholipases - genetics Phospholipases - metabolism Physiological aspects Pichia - genetics Pichia - metabolism Pichia pastoris Proteins Pseudozyma Recombinant Proteins - genetics Recombinant Proteins - isolation & purification Recombinant Proteins - metabolism Sequence Analysis, DNA Smut fungi Studies Substrate Specificity Substrates Ustilago - enzymology Ustilago - genetics Ustilago maydis Yeast |
title | Uml2 is a novel CalB-type lipase of Ustilago maydis with phospholipase A activity |
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