Diversity, cold active enzymes and adaptation strategies of bacteria inhabiting glacier cryoconite holes of High Arctic
Cryoconite holes have biogeochemical, ecological and biotechnological importance. This communication presents results on culturable psychrophilic bacterial diversity from cryoconite holes at Midre Lovénbreen (ML), Austre Brøggerbreen (AB), and Vestre Brøggerbreen (VB) glaciers. The culturable bacter...
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Veröffentlicht in: | Extremophiles : life under extreme conditions 2014-03, Vol.18 (2), p.229-242 |
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description | Cryoconite holes have biogeochemical, ecological and biotechnological importance. This communication presents results on culturable psychrophilic bacterial diversity from cryoconite holes at Midre Lovénbreen (ML), Austre Brøggerbreen (AB), and Vestre Brøggerbreen (VB) glaciers. The culturable bacterial count ranged from 2.7 × 10
3
to 8.8 × 10
4
CFUs/g while the total bacterial numbers ranged from 5.07 × 10
5
to 1.50 × 10
6
cells at the three glaciers. A total of 35 morphologically distinct bacterial isolates were isolated. Based on 16S rRNA gene sequence data, the identified species belonged to eight genera namely
Pseudomonas
,
Polaromonas
,
Micrococcus
,
Subtercola
,
Agreia
,
Leifsonia
,
Cryobacterium
and
Flavobacterium
. The isolates varied in their growth temperature, NaCl tolerance, growth pH, enzyme activities, carbon utilization and antibiotic sensitivity tests. Fatty acid profiles indicate the predominance of branched fatty acids in the isolates. To the best of our knowledge, this is the first record of culturable bacterial communities and their characterization from glacier cryoconites from High Arctic. High amylase and protease activities expressed by
Micrococcus
sp. MLB-41 and amylase, protease and lipase activities expressed by
Cryobacterium
sp. MLB-32 provide a clue to the potential applications of these organisms. These cold-adapted enzymes may provide an opportunity for the prospect of biotechnology in Arctic. |
doi_str_mv | 10.1007/s00792-013-0609-6 |
format | Article |
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3
to 8.8 × 10
4
CFUs/g while the total bacterial numbers ranged from 5.07 × 10
5
to 1.50 × 10
6
cells at the three glaciers. A total of 35 morphologically distinct bacterial isolates were isolated. Based on 16S rRNA gene sequence data, the identified species belonged to eight genera namely
Pseudomonas
,
Polaromonas
,
Micrococcus
,
Subtercola
,
Agreia
,
Leifsonia
,
Cryobacterium
and
Flavobacterium
. The isolates varied in their growth temperature, NaCl tolerance, growth pH, enzyme activities, carbon utilization and antibiotic sensitivity tests. Fatty acid profiles indicate the predominance of branched fatty acids in the isolates. To the best of our knowledge, this is the first record of culturable bacterial communities and their characterization from glacier cryoconites from High Arctic. High amylase and protease activities expressed by
Micrococcus
sp. MLB-41 and amylase, protease and lipase activities expressed by
Cryobacterium
sp. MLB-32 provide a clue to the potential applications of these organisms. These cold-adapted enzymes may provide an opportunity for the prospect of biotechnology in Arctic.</description><identifier>ISSN: 1431-0651</identifier><identifier>EISSN: 1433-4909</identifier><identifier>DOI: 10.1007/s00792-013-0609-6</identifier><identifier>PMID: 24346230</identifier><language>eng</language><publisher>Tokyo: Springer Japan</publisher><subject>Adaptation, Physiological ; Arctic Regions ; Bacteria ; Bacteria - isolation & purification ; Bacterial Proteins - genetics ; Bacterial Proteins - metabolism ; Biochemistry ; Biogeochemistry ; Biomedical and Life Sciences ; Biotechnology ; Enzymatic activity ; Enzymes ; Enzymes - genetics ; Enzymes - metabolism ; Fatty acids ; Flavobacterium ; Glaciers ; Ice Cover - microbiology ; Life Sciences ; Microbial Ecology ; Microbiology ; Microbiota ; Micrococcus ; Morphology ; Original Paper ; Phenotype ; Pseudomonas ; Sodium chloride ; Space life sciences</subject><ispartof>Extremophiles : life under extreme conditions, 2014-03, Vol.18 (2), p.229-242</ispartof><rights>Springer Japan 2013</rights><rights>Springer Japan 2014</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c471t-e244dac490f229413c26a4391e3a87167c78b5c6f97bc4f242c25c9d8607f5483</citedby><cites>FETCH-LOGICAL-c471t-e244dac490f229413c26a4391e3a87167c78b5c6f97bc4f242c25c9d8607f5483</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s00792-013-0609-6$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s00792-013-0609-6$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,776,780,27901,27902,41464,42533,51294</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/24346230$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Singh, Purnima</creatorcontrib><creatorcontrib>Singh, Shiv M.</creatorcontrib><creatorcontrib>Dhakephalkar, Prashant</creatorcontrib><title>Diversity, cold active enzymes and adaptation strategies of bacteria inhabiting glacier cryoconite holes of High Arctic</title><title>Extremophiles : life under extreme conditions</title><addtitle>Extremophiles</addtitle><addtitle>Extremophiles</addtitle><description>Cryoconite holes have biogeochemical, ecological and biotechnological importance. This communication presents results on culturable psychrophilic bacterial diversity from cryoconite holes at Midre Lovénbreen (ML), Austre Brøggerbreen (AB), and Vestre Brøggerbreen (VB) glaciers. The culturable bacterial count ranged from 2.7 × 10
3
to 8.8 × 10
4
CFUs/g while the total bacterial numbers ranged from 5.07 × 10
5
to 1.50 × 10
6
cells at the three glaciers. A total of 35 morphologically distinct bacterial isolates were isolated. Based on 16S rRNA gene sequence data, the identified species belonged to eight genera namely
Pseudomonas
,
Polaromonas
,
Micrococcus
,
Subtercola
,
Agreia
,
Leifsonia
,
Cryobacterium
and
Flavobacterium
. The isolates varied in their growth temperature, NaCl tolerance, growth pH, enzyme activities, carbon utilization and antibiotic sensitivity tests. Fatty acid profiles indicate the predominance of branched fatty acids in the isolates. To the best of our knowledge, this is the first record of culturable bacterial communities and their characterization from glacier cryoconites from High Arctic. High amylase and protease activities expressed by
Micrococcus
sp. MLB-41 and amylase, protease and lipase activities expressed by
Cryobacterium
sp. MLB-32 provide a clue to the potential applications of these organisms. These cold-adapted enzymes may provide an opportunity for the prospect of biotechnology in Arctic.</description><subject>Adaptation, Physiological</subject><subject>Arctic Regions</subject><subject>Bacteria</subject><subject>Bacteria - isolation & purification</subject><subject>Bacterial Proteins - genetics</subject><subject>Bacterial Proteins - metabolism</subject><subject>Biochemistry</subject><subject>Biogeochemistry</subject><subject>Biomedical and Life Sciences</subject><subject>Biotechnology</subject><subject>Enzymatic activity</subject><subject>Enzymes</subject><subject>Enzymes - genetics</subject><subject>Enzymes - metabolism</subject><subject>Fatty acids</subject><subject>Flavobacterium</subject><subject>Glaciers</subject><subject>Ice Cover - microbiology</subject><subject>Life Sciences</subject><subject>Microbial Ecology</subject><subject>Microbiology</subject><subject>Microbiota</subject><subject>Micrococcus</subject><subject>Morphology</subject><subject>Original Paper</subject><subject>Phenotype</subject><subject>Pseudomonas</subject><subject>Sodium chloride</subject><subject>Space life sciences</subject><issn>1431-0651</issn><issn>1433-4909</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2014</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>8G5</sourceid><sourceid>BENPR</sourceid><sourceid>GUQSH</sourceid><sourceid>M2O</sourceid><recordid>eNqFkUtr3DAUhUVJyPsHdBME2WQRN3pZspYhrykEsknWQpZlj4JHmkialsmvr1xPSymUbiRxz3fP5eoA8BmjLxghcZ3KIUmFMK0QR7Lin8ARZpRWTCK59_ONi1LjQ3Cc0htCuC7CATgkjDJOKDoC3-_cNxuTy9sraMLYQW1yqUDrP7Yrm6D2pdTpddbZBQ9TjjrbwRUl9LAtsI1OQ-eXunXZ-QEOozbORmjiNpjgXbZwGcaZX7hhCW9imWBOwX6vx2TPdvcJeH24f7ldVE_Pj19vb54qwwTOlSWMddqUfXpCJMPUEK4ZldhS3QjMhRFNWxveS9Ea1hNGDKmN7BqORF-zhp6Ay9l3HcP7xqasVi4ZO47a27BJCteUNUSI8lX_RxGRkvN6cr34C30Lm-jLIhOFG4SRmAzxTJkYUoq2V-voVjpuFUZqClDNAaoSoJoCVLz0nO-cN-3Kdr87fiVWADIDqUh-sPGP0f90_QGk8KVB</recordid><startdate>20140301</startdate><enddate>20140301</enddate><creator>Singh, Purnima</creator><creator>Singh, Shiv M.</creator><creator>Dhakephalkar, Prashant</creator><general>Springer Japan</general><general>Springer Nature B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QL</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>88I</scope><scope>8AO</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>8G5</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>F1W</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>GUQSH</scope><scope>H95</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>L.G</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M2O</scope><scope>M2P</scope><scope>M7N</scope><scope>M7P</scope><scope>MBDVC</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>Q9U</scope><scope>7X8</scope></search><sort><creationdate>20140301</creationdate><title>Diversity, cold active enzymes and adaptation strategies of bacteria inhabiting glacier cryoconite holes of High Arctic</title><author>Singh, Purnima ; Singh, Shiv M. ; Dhakephalkar, Prashant</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c471t-e244dac490f229413c26a4391e3a87167c78b5c6f97bc4f242c25c9d8607f5483</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2014</creationdate><topic>Adaptation, Physiological</topic><topic>Arctic Regions</topic><topic>Bacteria</topic><topic>Bacteria - isolation & purification</topic><topic>Bacterial Proteins - genetics</topic><topic>Bacterial Proteins - metabolism</topic><topic>Biochemistry</topic><topic>Biogeochemistry</topic><topic>Biomedical and Life Sciences</topic><topic>Biotechnology</topic><topic>Enzymatic activity</topic><topic>Enzymes</topic><topic>Enzymes - genetics</topic><topic>Enzymes - metabolism</topic><topic>Fatty acids</topic><topic>Flavobacterium</topic><topic>Glaciers</topic><topic>Ice Cover - microbiology</topic><topic>Life Sciences</topic><topic>Microbial Ecology</topic><topic>Microbiology</topic><topic>Microbiota</topic><topic>Micrococcus</topic><topic>Morphology</topic><topic>Original Paper</topic><topic>Phenotype</topic><topic>Pseudomonas</topic><topic>Sodium chloride</topic><topic>Space life sciences</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Singh, Purnima</creatorcontrib><creatorcontrib>Singh, Shiv M.</creatorcontrib><creatorcontrib>Dhakephalkar, Prashant</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Science Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Research Library (Alumni Edition)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>Research Library Prep</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Research Library</collection><collection>Science Database</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biological Science Database</collection><collection>Research Library (Corporate)</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central Basic</collection><collection>MEDLINE - Academic</collection><jtitle>Extremophiles : life under extreme conditions</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Singh, Purnima</au><au>Singh, Shiv M.</au><au>Dhakephalkar, Prashant</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Diversity, cold active enzymes and adaptation strategies of bacteria inhabiting glacier cryoconite holes of High Arctic</atitle><jtitle>Extremophiles : life under extreme conditions</jtitle><stitle>Extremophiles</stitle><addtitle>Extremophiles</addtitle><date>2014-03-01</date><risdate>2014</risdate><volume>18</volume><issue>2</issue><spage>229</spage><epage>242</epage><pages>229-242</pages><issn>1431-0651</issn><eissn>1433-4909</eissn><abstract>Cryoconite holes have biogeochemical, ecological and biotechnological importance. This communication presents results on culturable psychrophilic bacterial diversity from cryoconite holes at Midre Lovénbreen (ML), Austre Brøggerbreen (AB), and Vestre Brøggerbreen (VB) glaciers. The culturable bacterial count ranged from 2.7 × 10
3
to 8.8 × 10
4
CFUs/g while the total bacterial numbers ranged from 5.07 × 10
5
to 1.50 × 10
6
cells at the three glaciers. A total of 35 morphologically distinct bacterial isolates were isolated. Based on 16S rRNA gene sequence data, the identified species belonged to eight genera namely
Pseudomonas
,
Polaromonas
,
Micrococcus
,
Subtercola
,
Agreia
,
Leifsonia
,
Cryobacterium
and
Flavobacterium
. The isolates varied in their growth temperature, NaCl tolerance, growth pH, enzyme activities, carbon utilization and antibiotic sensitivity tests. Fatty acid profiles indicate the predominance of branched fatty acids in the isolates. To the best of our knowledge, this is the first record of culturable bacterial communities and their characterization from glacier cryoconites from High Arctic. High amylase and protease activities expressed by
Micrococcus
sp. MLB-41 and amylase, protease and lipase activities expressed by
Cryobacterium
sp. MLB-32 provide a clue to the potential applications of these organisms. These cold-adapted enzymes may provide an opportunity for the prospect of biotechnology in Arctic.</abstract><cop>Tokyo</cop><pub>Springer Japan</pub><pmid>24346230</pmid><doi>10.1007/s00792-013-0609-6</doi><tpages>14</tpages></addata></record> |
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subjects | Adaptation, Physiological Arctic Regions Bacteria Bacteria - isolation & purification Bacterial Proteins - genetics Bacterial Proteins - metabolism Biochemistry Biogeochemistry Biomedical and Life Sciences Biotechnology Enzymatic activity Enzymes Enzymes - genetics Enzymes - metabolism Fatty acids Flavobacterium Glaciers Ice Cover - microbiology Life Sciences Microbial Ecology Microbiology Microbiota Micrococcus Morphology Original Paper Phenotype Pseudomonas Sodium chloride Space life sciences |
title | Diversity, cold active enzymes and adaptation strategies of bacteria inhabiting glacier cryoconite holes of High Arctic |
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