Estimating structure quality trends in the Protein Data Bank by equivalent resolution

•A method to estimate equivalent resolution for protein structures is presented.•A time-trend in the PDB structures’ quality for the methods is compared.•All five methods show significantly higher e-resolutions for smaller proteins.•The predictions improved on modeling with “1/log(size)” instead of...

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Veröffentlicht in:	Computational biology and chemistry 2013-10, Vol.46, p.8-15
Hauptverfasser:	Bagaria, Anurag, Jaravine, Victor, Güntert, Peter
Format:	Artikel
Sprache:	eng
Schlagworte:	Computation Data banks Databases, Protein - standards Equivalence Equivalent resolution Evolution Image Processing, Computer-Assisted - standards Image Processing, Computer-Assisted - statistics & numerical data Mathematical analysis Multiple linear regression Multivariate Analysis Nuclear magnetic resonance PDB Protein structure validation Proteins Proteins - chemistry Structure quality Trends X-ray and NMR
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