Unravelling novel synergies between organometallic and biological partners: a quantum mechanics/molecular mechanics study of an artificial metalloenzyme
In recent years, the design of artificial metalloenzymes obtained by the insertion of homogeneous catalysts into biological macromolecules has become a major field of research. These hybrids, and the corresponding X-ray structures of several of them, are offering opportunities to better understand t...
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Veröffentlicht in: | Journal of the Royal Society interface 2014-07, Vol.11 (96), p.20140090 |
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creator | Ortega-Carrasco, Elisabeth Lledós, Agustí Maréchal, Jean-Didier |
description | In recent years, the design of artificial metalloenzymes obtained by the insertion of homogeneous catalysts into biological macromolecules has become a major field of research. These hybrids, and the corresponding X-ray structures of several of them, are offering opportunities to better understand the synergy between organometallic and biological subsystems. In this work, we investigate the resting state and activation process of a hybrid inspired by an oxidative haemoenzyme but presenting an unexpected reactivity and structural features. An extensive series of quantum mechanics/molecular mechanics calculations show that the resting state and the activation processes of the novel enzyme differ from naturally occurring haemoenzymes in terms of the electronic state of the metal, participation of the first coordination sphere of the metal and the dynamic process. This study presents novel insights into the sensitivity of the association between organometallic and biological partners and illustrates the molecular challenge that represents the design of efficient enzymes based on this strategy. |
doi_str_mv | 10.1098/rsif.2014.0090 |
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All rights reserved. 2014</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c636t-416b05b8a8d573712375823ff364efafebb82079301831c1dbb6dc252f5898f73</citedby><cites>FETCH-LOGICAL-c636t-416b05b8a8d573712375823ff364efafebb82079301831c1dbb6dc252f5898f73</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4032530/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4032530/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,723,776,780,881,27901,27902,53766,53768</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/24829279$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Ortega-Carrasco, Elisabeth</creatorcontrib><creatorcontrib>Lledós, Agustí</creatorcontrib><creatorcontrib>Maréchal, Jean-Didier</creatorcontrib><title>Unravelling novel synergies between organometallic and biological partners: a quantum mechanics/molecular mechanics study of an artificial metalloenzyme</title><title>Journal of the Royal Society interface</title><addtitle>J. R. Soc. Interface</addtitle><addtitle>J. R. Soc. Interface</addtitle><description>In recent years, the design of artificial metalloenzymes obtained by the insertion of homogeneous catalysts into biological macromolecules has become a major field of research. These hybrids, and the corresponding X-ray structures of several of them, are offering opportunities to better understand the synergy between organometallic and biological subsystems. In this work, we investigate the resting state and activation process of a hybrid inspired by an oxidative haemoenzyme but presenting an unexpected reactivity and structural features. An extensive series of quantum mechanics/molecular mechanics calculations show that the resting state and the activation processes of the novel enzyme differ from naturally occurring haemoenzymes in terms of the electronic state of the metal, participation of the first coordination sphere of the metal and the dynamic process. This study presents novel insights into the sensitivity of the association between organometallic and biological partners and illustrates the molecular challenge that represents the design of efficient enzymes based on this strategy.</description><subject>Activation Process</subject><subject>Artificial Metalloenzymes</subject><subject>Computational Bioinorganics</subject><subject>Crystallography, X-Ray</subject><subject>Enzymes - chemistry</subject><subject>Heme - chemistry</subject><subject>Iron - chemistry</subject><subject>Kinetics</subject><subject>Models, Molecular</subject><subject>Molecular Dynamics Simulation</subject><subject>Protein Engineering - methods</subject><subject>Quantum Theory</subject><subject>Resting State</subject><subject>Schiff Bases - chemistry</subject><issn>1742-5689</issn><issn>1742-5662</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2014</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp9Uctu1DAUjRCIlsKWJfKSzUz9iB2HBRKqWlpUCQQUJDaW41xPXRJ7aicD6ZfwuXiUMlAhWPnaPo-rc4riKcFLgmt5GJOzS4pJucS4xveKfVKVdMGFoPd3s6z3ikcpXWHMKsb5w2KPlpLWtKr3ix8XPuoNdJ3zK-RDnlCaPMSVg4QaGL4BeBTiSvvQw6AzziDtW9S40IWVM7pDax2HzEgvkEbXo_bD2KMezKX2zqTDPnRgxk7H328oDWM7oWCzEspkZ51xWWg2COBvph4eFw-s7hI8uT0PiouT449Hp4vzt6_Pjl6dL4xgYliURDSYN1LLllesIpRVXFJmLRMlWG2haSTFVc0wkYwY0jaNaA3l1HJZS1uxg-LlrLsemx5aA36IulPr6HodJxW0U3d_vLtUq7BRJWaUM5wFnt8KxHA9QhpU75LJiWoPYUyKcMorIXIlGbqcoSaGlCLYnQ3Balun2taptnWqbZ2Z8OzP5XbwX_1lAJsBMUw5pWAcDJO6CmP0-fpvWfgf6_2Hs5MNIa4WCufQcA66pOrGrWcdQpRLaQSV_-8K_-2zmH1cGuD7bnsdvyqRy-LqkyzVm3dfKnFKhfrMfgItwuNU</recordid><startdate>20140706</startdate><enddate>20140706</enddate><creator>Ortega-Carrasco, Elisabeth</creator><creator>Lledós, Agustí</creator><creator>Maréchal, Jean-Didier</creator><general>The Royal Society</general><scope>BSCLL</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20140706</creationdate><title>Unravelling novel synergies between organometallic and biological partners: a quantum mechanics/molecular mechanics study of an artificial metalloenzyme</title><author>Ortega-Carrasco, Elisabeth ; Lledós, Agustí ; Maréchal, Jean-Didier</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c636t-416b05b8a8d573712375823ff364efafebb82079301831c1dbb6dc252f5898f73</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2014</creationdate><topic>Activation Process</topic><topic>Artificial Metalloenzymes</topic><topic>Computational Bioinorganics</topic><topic>Crystallography, X-Ray</topic><topic>Enzymes - chemistry</topic><topic>Heme - chemistry</topic><topic>Iron - chemistry</topic><topic>Kinetics</topic><topic>Models, Molecular</topic><topic>Molecular Dynamics Simulation</topic><topic>Protein Engineering - methods</topic><topic>Quantum Theory</topic><topic>Resting State</topic><topic>Schiff Bases - chemistry</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Ortega-Carrasco, Elisabeth</creatorcontrib><creatorcontrib>Lledós, Agustí</creatorcontrib><creatorcontrib>Maréchal, Jean-Didier</creatorcontrib><collection>Istex</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Journal of the Royal Society interface</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Ortega-Carrasco, Elisabeth</au><au>Lledós, Agustí</au><au>Maréchal, Jean-Didier</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Unravelling novel synergies between organometallic and biological partners: a quantum mechanics/molecular mechanics study of an artificial metalloenzyme</atitle><jtitle>Journal of the Royal Society interface</jtitle><stitle>J. R. Soc. Interface</stitle><addtitle>J. R. Soc. Interface</addtitle><date>2014-07-06</date><risdate>2014</risdate><volume>11</volume><issue>96</issue><spage>20140090</spage><pages>20140090-</pages><issn>1742-5689</issn><eissn>1742-5662</eissn><abstract>In recent years, the design of artificial metalloenzymes obtained by the insertion of homogeneous catalysts into biological macromolecules has become a major field of research. These hybrids, and the corresponding X-ray structures of several of them, are offering opportunities to better understand the synergy between organometallic and biological subsystems. In this work, we investigate the resting state and activation process of a hybrid inspired by an oxidative haemoenzyme but presenting an unexpected reactivity and structural features. An extensive series of quantum mechanics/molecular mechanics calculations show that the resting state and the activation processes of the novel enzyme differ from naturally occurring haemoenzymes in terms of the electronic state of the metal, participation of the first coordination sphere of the metal and the dynamic process. This study presents novel insights into the sensitivity of the association between organometallic and biological partners and illustrates the molecular challenge that represents the design of efficient enzymes based on this strategy.</abstract><cop>England</cop><pub>The Royal Society</pub><pmid>24829279</pmid><doi>10.1098/rsif.2014.0090</doi><oa>free_for_read</oa></addata></record> |
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subjects | Activation Process Artificial Metalloenzymes Computational Bioinorganics Crystallography, X-Ray Enzymes - chemistry Heme - chemistry Iron - chemistry Kinetics Models, Molecular Molecular Dynamics Simulation Protein Engineering - methods Quantum Theory Resting State Schiff Bases - chemistry |
title | Unravelling novel synergies between organometallic and biological partners: a quantum mechanics/molecular mechanics study of an artificial metalloenzyme |
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