Complete genomic sequence analyses of the first group A giraffe rotavirus reveals close evolutionary relationship with rotaviruses infecting other members of the Artiodactyla
Group A Rotaviruses (RVA) have been established as significant contributory agents of acute gastroenteritis in young children and many animal species. In 2008, we described the first RVA strain detected in a giraffe calf (RVA/Giraffe-wt/IRL/GirRV/2008/G10P[11]), presenting with acute diarrhoea. Mole...
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| Veröffentlicht in: | Veterinary microbiology 2014-05, Vol.170 (1-2), p.151-156 |
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| creator | O'Shea, Helen Mulherin, Emily Matthijnssens, Jelle McCusker, Matthew P. Collins, P.J. Cashman, Olivia Gunn, Lynda Beltman, Marijke E. Fanning, Séamus |
| description | Group A Rotaviruses (RVA) have been established as significant contributory agents of acute gastroenteritis in young children and many animal species. In 2008, we described the first RVA strain detected in a giraffe calf (RVA/Giraffe-wt/IRL/GirRV/2008/G10P[11]), presenting with acute diarrhoea. Molecular characterisation of the VP7 and VP4 genes revealed the bovine-like genotypes G10 and P[11], respectively. To further investigate the origin of this giraffe RVA strain, the 9 remaining gene segments were sequenced and analysed, revealing the following genotype constellation: G10-P[11]-I2-R2-C2-M2-A3-N2-T6-E2-H3. This genotype constellation is very similar to RVA strains isolated from cattle or other members of the artiodactyls. Phylogenetic analyses confirmed the close relationship between GirRV and RVA strains with a bovine-like genotype constellation detected from several host species, including humans. These results suggest that RVA strain GirRV was the result of an interspecies transmission from a bovine host to the giraffe calf. However, we cannot rule out completely that this bovine-like RVA genotype constellation may be enzootic in giraffes. Future RVA surveillance in giraffes may answer this intriguing question. |
| doi_str_mv | 10.1016/j.vetmic.2014.01.012 |
| format | Article |
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In 2008, we described the first RVA strain detected in a giraffe calf (RVA/Giraffe-wt/IRL/GirRV/2008/G10P[11]), presenting with acute diarrhoea. Molecular characterisation of the VP7 and VP4 genes revealed the bovine-like genotypes G10 and P[11], respectively. To further investigate the origin of this giraffe RVA strain, the 9 remaining gene segments were sequenced and analysed, revealing the following genotype constellation: G10-P[11]-I2-R2-C2-M2-A3-N2-T6-E2-H3. This genotype constellation is very similar to RVA strains isolated from cattle or other members of the artiodactyls. Phylogenetic analyses confirmed the close relationship between GirRV and RVA strains with a bovine-like genotype constellation detected from several host species, including humans. These results suggest that RVA strain GirRV was the result of an interspecies transmission from a bovine host to the giraffe calf. However, we cannot rule out completely that this bovine-like RVA genotype constellation may be enzootic in giraffes. Future RVA surveillance in giraffes may answer this intriguing question.</description><identifier>ISSN: 0378-1135</identifier><identifier>EISSN: 1873-2542</identifier><identifier>DOI: 10.1016/j.vetmic.2014.01.012</identifier><identifier>PMID: 24582453</identifier><language>eng</language><publisher>Netherlands: Elsevier B.V</publisher><subject>Animals ; Artiodactyla ; Artiodactyla - virology ; Complete genome analyses ; Genes, Viral - genetics ; Genome, Viral - genetics ; Genomics ; Genotype ; Giraffe ; Group A rotavirus ; Humans ; Molecular Sequence Data ; Phylogeny ; Rotavirus ; Rotavirus - classification ; Rotavirus - genetics ; Rotavirus - isolation & purification ; Rotavirus Infections - veterinary ; Rotavirus Infections - virology ; Sequence Analysis - veterinary</subject><ispartof>Veterinary microbiology, 2014-05, Vol.170 (1-2), p.151-156</ispartof><rights>2014 Elsevier B.V.</rights><rights>Copyright © 2014 Elsevier B.V. All rights reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c395t-caedb646dfefe09aa9134290c07e831b24050b6c910c313566a00471199bd8ac3</citedby><cites>FETCH-LOGICAL-c395t-caedb646dfefe09aa9134290c07e831b24050b6c910c313566a00471199bd8ac3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S0378113514000479$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,776,780,3537,27901,27902,65306</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/24582453$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>O'Shea, Helen</creatorcontrib><creatorcontrib>Mulherin, Emily</creatorcontrib><creatorcontrib>Matthijnssens, Jelle</creatorcontrib><creatorcontrib>McCusker, Matthew P.</creatorcontrib><creatorcontrib>Collins, P.J.</creatorcontrib><creatorcontrib>Cashman, Olivia</creatorcontrib><creatorcontrib>Gunn, Lynda</creatorcontrib><creatorcontrib>Beltman, Marijke E.</creatorcontrib><creatorcontrib>Fanning, Séamus</creatorcontrib><title>Complete genomic sequence analyses of the first group A giraffe rotavirus reveals close evolutionary relationship with rotaviruses infecting other members of the Artiodactyla</title><title>Veterinary microbiology</title><addtitle>Vet Microbiol</addtitle><description>Group A Rotaviruses (RVA) have been established as significant contributory agents of acute gastroenteritis in young children and many animal species. In 2008, we described the first RVA strain detected in a giraffe calf (RVA/Giraffe-wt/IRL/GirRV/2008/G10P[11]), presenting with acute diarrhoea. Molecular characterisation of the VP7 and VP4 genes revealed the bovine-like genotypes G10 and P[11], respectively. To further investigate the origin of this giraffe RVA strain, the 9 remaining gene segments were sequenced and analysed, revealing the following genotype constellation: G10-P[11]-I2-R2-C2-M2-A3-N2-T6-E2-H3. This genotype constellation is very similar to RVA strains isolated from cattle or other members of the artiodactyls. Phylogenetic analyses confirmed the close relationship between GirRV and RVA strains with a bovine-like genotype constellation detected from several host species, including humans. These results suggest that RVA strain GirRV was the result of an interspecies transmission from a bovine host to the giraffe calf. However, we cannot rule out completely that this bovine-like RVA genotype constellation may be enzootic in giraffes. Future RVA surveillance in giraffes may answer this intriguing question.</description><subject>Animals</subject><subject>Artiodactyla</subject><subject>Artiodactyla - virology</subject><subject>Complete genome analyses</subject><subject>Genes, Viral - genetics</subject><subject>Genome, Viral - genetics</subject><subject>Genomics</subject><subject>Genotype</subject><subject>Giraffe</subject><subject>Group A rotavirus</subject><subject>Humans</subject><subject>Molecular Sequence Data</subject><subject>Phylogeny</subject><subject>Rotavirus</subject><subject>Rotavirus - classification</subject><subject>Rotavirus - genetics</subject><subject>Rotavirus - isolation & purification</subject><subject>Rotavirus Infections - veterinary</subject><subject>Rotavirus Infections - virology</subject><subject>Sequence Analysis - veterinary</subject><issn>0378-1135</issn><issn>1873-2542</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2014</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqNkc2KFDEUhYMoTs_oG4hk6abam6R-N0LT-AcDbnQdUqlb3WmqKmWSKumXmmf0Nj2OOxFuSCDn3APfYeyNgK0AUb4_bVdMo7NbCSLfgqCRz9hG1JXKZJHL52wDqqozIVRxw25jPAFA3pTwkt3IvKjpqA172PtxHjAhP-DkaR2P-HPBySI3kxnOESP3PU9H5L0LMfFD8MvMd_zggul75MEns7qwRB5wRTNEbgcfkePqhyU5P5lwpq_BXN7x6Gb-y6XjXxvtd1OPNrnpwD3lBD7i2GJ4yt0FsnbGpvNgXrEXPWXg68f7jv349PH7_kt2_-3z1_3uPrOqKVJmDXZtmZddjz1CY0wjVC4bsFBhrUQrcyigLW0jwCriU5aG2FRCNE3b1caqO_buuncOnnDEpEcXLQ6DmdAvUYtCElxVFtV_SKEua6hETtL8KrXBxxiw13NwIwHSAvSlVH3S11L1pVQNgkaS7e1jwtKO2D2Z_rRIgg9XARKS1WHQ0bpLh50LRFZ33v074TdeUrmQ</recordid><startdate>20140514</startdate><enddate>20140514</enddate><creator>O'Shea, Helen</creator><creator>Mulherin, Emily</creator><creator>Matthijnssens, Jelle</creator><creator>McCusker, Matthew P.</creator><creator>Collins, P.J.</creator><creator>Cashman, Olivia</creator><creator>Gunn, Lynda</creator><creator>Beltman, Marijke E.</creator><creator>Fanning, Séamus</creator><general>Elsevier B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7U9</scope><scope>8FD</scope><scope>FR3</scope><scope>H94</scope><scope>P64</scope><scope>RC3</scope></search><sort><creationdate>20140514</creationdate><title>Complete genomic sequence analyses of the first group A giraffe rotavirus reveals close evolutionary relationship with rotaviruses infecting other members of the Artiodactyla</title><author>O'Shea, Helen ; 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| source | MEDLINE; ScienceDirect Journals (5 years ago - present) |
| subjects | Animals Artiodactyla Artiodactyla - virology Complete genome analyses Genes, Viral - genetics Genome, Viral - genetics Genomics Genotype Giraffe Group A rotavirus Humans Molecular Sequence Data Phylogeny Rotavirus Rotavirus - classification Rotavirus - genetics Rotavirus - isolation & purification Rotavirus Infections - veterinary Rotavirus Infections - virology Sequence Analysis - veterinary |
| title | Complete genomic sequence analyses of the first group A giraffe rotavirus reveals close evolutionary relationship with rotaviruses infecting other members of the Artiodactyla |
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