Transcriptional regulation of human ferredoxin reductase through an intronic enhancer in steroidogenic cells
Ferredoxin reductase (FDXR, also known as adrenodoxin reductase) is a mitochondrial flavoprotein that transfers electrons from NADPH to mitochondrial cytochrome P450 enzymes, mediating the function of an iron–sulfur cluster protein, ferredoxin. FDXR functions in various metabolic processes including...
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creator | Imamichi, Yoshitaka Mizutani, Tetsuya Ju, Yunfeng Matsumura, Takehiro Kawabe, Shinya Kanno, Masafumi Yazawa, Takashi Miyamoto, Kaoru |
description | Ferredoxin reductase (FDXR, also known as adrenodoxin reductase) is a mitochondrial flavoprotein that transfers electrons from NADPH to mitochondrial cytochrome P450 enzymes, mediating the function of an iron–sulfur cluster protein, ferredoxin. FDXR functions in various metabolic processes including steroidogenesis. It is well known that multiple steroidogenic enzymes are regulated by a transcription factor steroidogenic factor-1 (SF-1, also known as Ad4BP). Previously, we have shown that SF-1 transduction causes human mesenchymal stem cell differentiation into steroidogenic cells. Genome-wide analysis of differentiated cells, using a combination of DNA microarray and promoter tiling array analyses, showed that FDXR is a novel SF-1 target gene. In this study, the transcriptional regulatory mechanism of FDXR was examined in steroidogenic cells. A chromatin immunoprecipitation assay revealed that a novel SF-1 binding region was located within intron 2 of the human FDXR gene. Luciferase reporter assays showed that FDXR transcription was activated through the novel SF-1 binding site within intron 2. Endogenous SF-1 knockdown in human adrenocortical H295R and KGN cells decreased FDXR expression. In H295R cells, strong binding of two histone markers of active enhancers, histones H3K27ac and H3K4me2, were detected near the SF-1 binding site within intron 2. Furthermore, the binding of these histone markers was decreased concurrent with SF-1 knockdown in H295R cells. These results indicated that abundant FDXR expression in these steroidogenic cells was maintained through SF-1 binding to the intronic enhancer of the FDXR gene.
•Expression of FDXR is activated by SF-1 in steroidogenic cells.•SF-1 directly binds to the FDXR gene's intron 2 and enhances transcriptional activity.•SF-1 affects the chromatin state around its binding site of the FDXR gene's intron 2. |
doi_str_mv | 10.1016/j.bbagrm.2013.11.005 |
format | Article |
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•Expression of FDXR is activated by SF-1 in steroidogenic cells.•SF-1 directly binds to the FDXR gene's intron 2 and enhances transcriptional activity.•SF-1 affects the chromatin state around its binding site of the FDXR gene's intron 2.</description><identifier>ISSN: 1874-9399</identifier><identifier>ISSN: 0006-3002</identifier><identifier>EISSN: 1876-4320</identifier><identifier>DOI: 10.1016/j.bbagrm.2013.11.005</identifier><identifier>PMID: 24321386</identifier><language>eng</language><publisher>Netherlands: Elsevier B.V</publisher><subject>Binding Sites ; Cell Line ; DNA-Binding Proteins ; Enhancer Elements, Genetic ; Ferredoxin reductase ; Ferredoxin-NADP Reductase - genetics ; Ferredoxin-NADP Reductase - metabolism ; Gene Expression Regulation ; Gene Knockdown Techniques ; Histone modification ; Histones - genetics ; Humans ; Introns ; Jumonji Domain-Containing Histone Demethylases - genetics ; Regulatory Sequences, Nucleic Acid ; Steroidogenic cell ; Steroidogenic Factor 1 - genetics ; Steroidogenic Factor 1 - metabolism ; Steroidogenic factor-1 ; Steroids - biosynthesis ; Steroids - metabolism ; Transcription factor ; Transcription, Genetic ; Transcriptional regulation</subject><ispartof>Biochimica et biophysica acta, 2014-01, Vol.1839 (1), p.33-42</ispartof><rights>2013 Elsevier B.V.</rights><rights>Copyright © 2013 Elsevier B.V. All rights reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c461t-dbb7f67872307e8b4c42d3eff40e1a481b8b42d18dd6c6f44e4db1fe3bf5992f3</citedby><cites>FETCH-LOGICAL-c461t-dbb7f67872307e8b4c42d3eff40e1a481b8b42d18dd6c6f44e4db1fe3bf5992f3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S1874939913001715$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,776,780,3537,27901,27902,65306</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/24321386$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Imamichi, Yoshitaka</creatorcontrib><creatorcontrib>Mizutani, Tetsuya</creatorcontrib><creatorcontrib>Ju, Yunfeng</creatorcontrib><creatorcontrib>Matsumura, Takehiro</creatorcontrib><creatorcontrib>Kawabe, Shinya</creatorcontrib><creatorcontrib>Kanno, Masafumi</creatorcontrib><creatorcontrib>Yazawa, Takashi</creatorcontrib><creatorcontrib>Miyamoto, Kaoru</creatorcontrib><title>Transcriptional regulation of human ferredoxin reductase through an intronic enhancer in steroidogenic cells</title><title>Biochimica et biophysica acta</title><addtitle>Biochim Biophys Acta</addtitle><description>Ferredoxin reductase (FDXR, also known as adrenodoxin reductase) is a mitochondrial flavoprotein that transfers electrons from NADPH to mitochondrial cytochrome P450 enzymes, mediating the function of an iron–sulfur cluster protein, ferredoxin. FDXR functions in various metabolic processes including steroidogenesis. It is well known that multiple steroidogenic enzymes are regulated by a transcription factor steroidogenic factor-1 (SF-1, also known as Ad4BP). Previously, we have shown that SF-1 transduction causes human mesenchymal stem cell differentiation into steroidogenic cells. Genome-wide analysis of differentiated cells, using a combination of DNA microarray and promoter tiling array analyses, showed that FDXR is a novel SF-1 target gene. In this study, the transcriptional regulatory mechanism of FDXR was examined in steroidogenic cells. A chromatin immunoprecipitation assay revealed that a novel SF-1 binding region was located within intron 2 of the human FDXR gene. Luciferase reporter assays showed that FDXR transcription was activated through the novel SF-1 binding site within intron 2. Endogenous SF-1 knockdown in human adrenocortical H295R and KGN cells decreased FDXR expression. In H295R cells, strong binding of two histone markers of active enhancers, histones H3K27ac and H3K4me2, were detected near the SF-1 binding site within intron 2. Furthermore, the binding of these histone markers was decreased concurrent with SF-1 knockdown in H295R cells. These results indicated that abundant FDXR expression in these steroidogenic cells was maintained through SF-1 binding to the intronic enhancer of the FDXR gene.
•Expression of FDXR is activated by SF-1 in steroidogenic cells.•SF-1 directly binds to the FDXR gene's intron 2 and enhances transcriptional activity.•SF-1 affects the chromatin state around its binding site of the FDXR gene's intron 2.</description><subject>Binding Sites</subject><subject>Cell Line</subject><subject>DNA-Binding Proteins</subject><subject>Enhancer Elements, Genetic</subject><subject>Ferredoxin reductase</subject><subject>Ferredoxin-NADP Reductase - genetics</subject><subject>Ferredoxin-NADP Reductase - metabolism</subject><subject>Gene Expression Regulation</subject><subject>Gene Knockdown Techniques</subject><subject>Histone modification</subject><subject>Histones - genetics</subject><subject>Humans</subject><subject>Introns</subject><subject>Jumonji Domain-Containing Histone Demethylases - genetics</subject><subject>Regulatory Sequences, Nucleic Acid</subject><subject>Steroidogenic cell</subject><subject>Steroidogenic Factor 1 - genetics</subject><subject>Steroidogenic Factor 1 - metabolism</subject><subject>Steroidogenic factor-1</subject><subject>Steroids - biosynthesis</subject><subject>Steroids - metabolism</subject><subject>Transcription factor</subject><subject>Transcription, Genetic</subject><subject>Transcriptional regulation</subject><issn>1874-9399</issn><issn>0006-3002</issn><issn>1876-4320</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2014</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkU1v1DAQhi1ERUvhHyCUI5cEj-11kgsSqviSKvXSni1_jHe9SuzFThD8-zps4Qgn2_M-M2O9LyFvgHZAQb4_dsbofZ47RoF3AB2lu2fkCoZetoIz-vz3XbQjH8dL8rKUI6USGKUvyCWrAPBBXpHpPutYbA6nJaSopybjfp309miSbw7rrGPjMWd06WeIVXarXXTBZjnktO4PTdVDXHKKwTYYDzpazLXSlAVzCi7tcVMsTlN5RS68ngq-fjqvycPnT_c3X9vbuy_fbj7etlZIWFpnTO9lP_SM0x4HI6xgjqP3giJoMYCpNeZgcE5a6YVA4Qx45MbvxpF5fk3eneeecvq-YlnUHMr2Ax0xrUXBDmTPR8bG_6NipP1OVCcrKs6ozamUjF6dcph1_qWAqi0SdVTnSNQWiQJQNZLa9vZpw2pmdH-b_mRQgQ9nAKslPwJmVWzAaqMLGe2iXAr_3vAInG2hQA</recordid><startdate>201401</startdate><enddate>201401</enddate><creator>Imamichi, Yoshitaka</creator><creator>Mizutani, Tetsuya</creator><creator>Ju, Yunfeng</creator><creator>Matsumura, Takehiro</creator><creator>Kawabe, Shinya</creator><creator>Kanno, Masafumi</creator><creator>Yazawa, Takashi</creator><creator>Miyamoto, Kaoru</creator><general>Elsevier B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7TM</scope><scope>8FD</scope><scope>FR3</scope><scope>P64</scope><scope>RC3</scope></search><sort><creationdate>201401</creationdate><title>Transcriptional regulation of human ferredoxin reductase through an intronic enhancer in steroidogenic cells</title><author>Imamichi, Yoshitaka ; Mizutani, Tetsuya ; Ju, Yunfeng ; Matsumura, Takehiro ; Kawabe, Shinya ; Kanno, Masafumi ; Yazawa, Takashi ; Miyamoto, Kaoru</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c461t-dbb7f67872307e8b4c42d3eff40e1a481b8b42d18dd6c6f44e4db1fe3bf5992f3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2014</creationdate><topic>Binding Sites</topic><topic>Cell Line</topic><topic>DNA-Binding Proteins</topic><topic>Enhancer Elements, Genetic</topic><topic>Ferredoxin reductase</topic><topic>Ferredoxin-NADP Reductase - genetics</topic><topic>Ferredoxin-NADP Reductase - metabolism</topic><topic>Gene Expression Regulation</topic><topic>Gene Knockdown Techniques</topic><topic>Histone modification</topic><topic>Histones - genetics</topic><topic>Humans</topic><topic>Introns</topic><topic>Jumonji Domain-Containing Histone Demethylases - genetics</topic><topic>Regulatory Sequences, Nucleic Acid</topic><topic>Steroidogenic cell</topic><topic>Steroidogenic Factor 1 - genetics</topic><topic>Steroidogenic Factor 1 - metabolism</topic><topic>Steroidogenic factor-1</topic><topic>Steroids - biosynthesis</topic><topic>Steroids - metabolism</topic><topic>Transcription factor</topic><topic>Transcription, Genetic</topic><topic>Transcriptional regulation</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Imamichi, Yoshitaka</creatorcontrib><creatorcontrib>Mizutani, Tetsuya</creatorcontrib><creatorcontrib>Ju, Yunfeng</creatorcontrib><creatorcontrib>Matsumura, Takehiro</creatorcontrib><creatorcontrib>Kawabe, Shinya</creatorcontrib><creatorcontrib>Kanno, Masafumi</creatorcontrib><creatorcontrib>Yazawa, Takashi</creatorcontrib><creatorcontrib>Miyamoto, Kaoru</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Nucleic Acids Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><jtitle>Biochimica et biophysica acta</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Imamichi, Yoshitaka</au><au>Mizutani, Tetsuya</au><au>Ju, Yunfeng</au><au>Matsumura, Takehiro</au><au>Kawabe, Shinya</au><au>Kanno, Masafumi</au><au>Yazawa, Takashi</au><au>Miyamoto, Kaoru</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Transcriptional regulation of human ferredoxin reductase through an intronic enhancer in steroidogenic cells</atitle><jtitle>Biochimica et biophysica acta</jtitle><addtitle>Biochim Biophys Acta</addtitle><date>2014-01</date><risdate>2014</risdate><volume>1839</volume><issue>1</issue><spage>33</spage><epage>42</epage><pages>33-42</pages><issn>1874-9399</issn><issn>0006-3002</issn><eissn>1876-4320</eissn><abstract>Ferredoxin reductase (FDXR, also known as adrenodoxin reductase) is a mitochondrial flavoprotein that transfers electrons from NADPH to mitochondrial cytochrome P450 enzymes, mediating the function of an iron–sulfur cluster protein, ferredoxin. FDXR functions in various metabolic processes including steroidogenesis. It is well known that multiple steroidogenic enzymes are regulated by a transcription factor steroidogenic factor-1 (SF-1, also known as Ad4BP). Previously, we have shown that SF-1 transduction causes human mesenchymal stem cell differentiation into steroidogenic cells. Genome-wide analysis of differentiated cells, using a combination of DNA microarray and promoter tiling array analyses, showed that FDXR is a novel SF-1 target gene. In this study, the transcriptional regulatory mechanism of FDXR was examined in steroidogenic cells. A chromatin immunoprecipitation assay revealed that a novel SF-1 binding region was located within intron 2 of the human FDXR gene. Luciferase reporter assays showed that FDXR transcription was activated through the novel SF-1 binding site within intron 2. Endogenous SF-1 knockdown in human adrenocortical H295R and KGN cells decreased FDXR expression. In H295R cells, strong binding of two histone markers of active enhancers, histones H3K27ac and H3K4me2, were detected near the SF-1 binding site within intron 2. Furthermore, the binding of these histone markers was decreased concurrent with SF-1 knockdown in H295R cells. These results indicated that abundant FDXR expression in these steroidogenic cells was maintained through SF-1 binding to the intronic enhancer of the FDXR gene.
•Expression of FDXR is activated by SF-1 in steroidogenic cells.•SF-1 directly binds to the FDXR gene's intron 2 and enhances transcriptional activity.•SF-1 affects the chromatin state around its binding site of the FDXR gene's intron 2.</abstract><cop>Netherlands</cop><pub>Elsevier B.V</pub><pmid>24321386</pmid><doi>10.1016/j.bbagrm.2013.11.005</doi><tpages>10</tpages></addata></record> |
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subjects | Binding Sites Cell Line DNA-Binding Proteins Enhancer Elements, Genetic Ferredoxin reductase Ferredoxin-NADP Reductase - genetics Ferredoxin-NADP Reductase - metabolism Gene Expression Regulation Gene Knockdown Techniques Histone modification Histones - genetics Humans Introns Jumonji Domain-Containing Histone Demethylases - genetics Regulatory Sequences, Nucleic Acid Steroidogenic cell Steroidogenic Factor 1 - genetics Steroidogenic Factor 1 - metabolism Steroidogenic factor-1 Steroids - biosynthesis Steroids - metabolism Transcription factor Transcription, Genetic Transcriptional regulation |
title | Transcriptional regulation of human ferredoxin reductase through an intronic enhancer in steroidogenic cells |
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