Investigation of circulating lncRNAs in B-cell neoplasms
Long non-coding RNAs (lncRNA) which are longer than 200 base pairs in length, play an important role in cellular machinery. Chronic lymphocytic leukemia (CLL) and multiple myeloma (MM) are neoplasms of B-cells. In our study we aimed to investigate circulating lncRNA levels of CLL and MM patients. Fo...
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Veröffentlicht in: | Clinica chimica acta 2014-04, Vol.431, p.255-259 |
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creator | Isin, Mustafa Ozgur, Emre Cetin, Guven Erten, Nilgun Aktan, Melih Gezer, Ugur Dalay, Nejat |
description | Long non-coding RNAs (lncRNA) which are longer than 200 base pairs in length, play an important role in cellular machinery. Chronic lymphocytic leukemia (CLL) and multiple myeloma (MM) are neoplasms of B-cells. In our study we aimed to investigate circulating lncRNA levels of CLL and MM patients. For this purpose we selected 5 candidate lncRNAs (TUG1, LincRNA-p21, MALAT1, HOTAIR, and GAS5) where the first two are regulated by p53. Analyses were performed by real-time PCR using cDNA synthesized from plasma RNAs. In both disease groups differential levels of plasma lncRNAs were observed. LincRNA-p21 was the only molecule displaying significant changes in the CLL group while all remaining lncRNAs showed significant differences in the MM group. In the MM group only TUG1 showed higher levels than the healthy volunteers. In conclusion, the expression levels of the candidate lncRNA molecules display a general trend for tissue- and disease-specific expression which can provide important potential biomarkers specific to the particular disease type. However, further studies are necessary to elucidate their involvement in disease development and progression.
•Expression of the lncRNA molecules is tissue- and disease-specific.•This is the first study analyzing plasma lncRNA levels in B-cell malignancies.•TUG1 expression is high and HOTAIR levels are low in patients with multiple myeloma.•Lower GAS5 and lincRNA-p21 levels are observed in CLL. |
doi_str_mv | 10.1016/j.cca.2014.02.010 |
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•Expression of the lncRNA molecules is tissue- and disease-specific.•This is the first study analyzing plasma lncRNA levels in B-cell malignancies.•TUG1 expression is high and HOTAIR levels are low in patients with multiple myeloma.•Lower GAS5 and lincRNA-p21 levels are observed in CLL.</description><identifier>ISSN: 0009-8981</identifier><identifier>EISSN: 1873-3492</identifier><identifier>DOI: 10.1016/j.cca.2014.02.010</identifier><identifier>PMID: 24583225</identifier><language>eng</language><publisher>Netherlands: Elsevier B.V</publisher><subject>B-Lymphocytes - chemistry ; B-Lymphocytes - metabolism ; Cell-free RNA ; Chronic lymphocytic leukemia ; Disease Progression ; DNA Primers ; DNA, Complementary - chemistry ; DNA, Complementary - genetics ; Humans ; lncRNA ; Lymphoma, B-Cell - blood ; Lymphoma, B-Cell - metabolism ; Multiple myeloma ; Multiple Myeloma - blood ; Multiple Myeloma - metabolism ; Polymerase Chain Reaction ; RNA, Long Noncoding - analysis ; RNA, Long Noncoding - blood</subject><ispartof>Clinica chimica acta, 2014-04, Vol.431, p.255-259</ispartof><rights>2014 Elsevier B.V.</rights><rights>Copyright © 2014 Elsevier B.V. All rights reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c353t-2675db1d10ff492061a993dbff773753095235a184933e47c5844f66298ef8963</citedby><cites>FETCH-LOGICAL-c353t-2675db1d10ff492061a993dbff773753095235a184933e47c5844f66298ef8963</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S0009898114000862$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,776,780,3537,27901,27902,65306</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/24583225$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Isin, Mustafa</creatorcontrib><creatorcontrib>Ozgur, Emre</creatorcontrib><creatorcontrib>Cetin, Guven</creatorcontrib><creatorcontrib>Erten, Nilgun</creatorcontrib><creatorcontrib>Aktan, Melih</creatorcontrib><creatorcontrib>Gezer, Ugur</creatorcontrib><creatorcontrib>Dalay, Nejat</creatorcontrib><title>Investigation of circulating lncRNAs in B-cell neoplasms</title><title>Clinica chimica acta</title><addtitle>Clin Chim Acta</addtitle><description>Long non-coding RNAs (lncRNA) which are longer than 200 base pairs in length, play an important role in cellular machinery. Chronic lymphocytic leukemia (CLL) and multiple myeloma (MM) are neoplasms of B-cells. In our study we aimed to investigate circulating lncRNA levels of CLL and MM patients. For this purpose we selected 5 candidate lncRNAs (TUG1, LincRNA-p21, MALAT1, HOTAIR, and GAS5) where the first two are regulated by p53. Analyses were performed by real-time PCR using cDNA synthesized from plasma RNAs. In both disease groups differential levels of plasma lncRNAs were observed. LincRNA-p21 was the only molecule displaying significant changes in the CLL group while all remaining lncRNAs showed significant differences in the MM group. In the MM group only TUG1 showed higher levels than the healthy volunteers. In conclusion, the expression levels of the candidate lncRNA molecules display a general trend for tissue- and disease-specific expression which can provide important potential biomarkers specific to the particular disease type. However, further studies are necessary to elucidate their involvement in disease development and progression.
•Expression of the lncRNA molecules is tissue- and disease-specific.•This is the first study analyzing plasma lncRNA levels in B-cell malignancies.•TUG1 expression is high and HOTAIR levels are low in patients with multiple myeloma.•Lower GAS5 and lincRNA-p21 levels are observed in CLL.</description><subject>B-Lymphocytes - chemistry</subject><subject>B-Lymphocytes - metabolism</subject><subject>Cell-free RNA</subject><subject>Chronic lymphocytic leukemia</subject><subject>Disease Progression</subject><subject>DNA Primers</subject><subject>DNA, Complementary - chemistry</subject><subject>DNA, Complementary - genetics</subject><subject>Humans</subject><subject>lncRNA</subject><subject>Lymphoma, B-Cell - blood</subject><subject>Lymphoma, B-Cell - metabolism</subject><subject>Multiple myeloma</subject><subject>Multiple Myeloma - blood</subject><subject>Multiple Myeloma - metabolism</subject><subject>Polymerase Chain Reaction</subject><subject>RNA, Long Noncoding - analysis</subject><subject>RNA, Long Noncoding - blood</subject><issn>0009-8981</issn><issn>1873-3492</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2014</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp9kEtLAzEUhYMotlZ_gBuZpZsZc_OYSXBVi49CURBdhzSTlJR51GRa8N-b0urS1eXCOeee-yF0DbgADOXdujBGFwQDKzApMOATNAZR0ZwySU7RGGMscyEFjNBFjOu0MlzCORoRxgUlhI-RmHc7Gwe_0oPvu6x3mfHBbJu0dqus6cz76zRmvssecmObJutsv2l0bOMlOnO6ifbqOCfo8-nxY_aSL96e57PpIjeU0yEnZcXrJdSAnUul0nktJa2XzlUVrTjFkhPKNQgmKbWsMlww5sqSSGGdkCWdoNtD7ib0X9tUVbU-7qvoVGUbFXBgjFQlZUkKB6kJfYzBOrUJvtXhWwFWe2BqrRIwtQemMFEJWPLcHOO3y9bWf45fQklwfxDY9OTO26Ci8bYztvbBmkHVvf8n_gfnyHho</recordid><startdate>20140420</startdate><enddate>20140420</enddate><creator>Isin, Mustafa</creator><creator>Ozgur, Emre</creator><creator>Cetin, Guven</creator><creator>Erten, Nilgun</creator><creator>Aktan, Melih</creator><creator>Gezer, Ugur</creator><creator>Dalay, Nejat</creator><general>Elsevier B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>20140420</creationdate><title>Investigation of circulating lncRNAs in B-cell neoplasms</title><author>Isin, Mustafa ; Ozgur, Emre ; Cetin, Guven ; Erten, Nilgun ; Aktan, Melih ; Gezer, Ugur ; Dalay, Nejat</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c353t-2675db1d10ff492061a993dbff773753095235a184933e47c5844f66298ef8963</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2014</creationdate><topic>B-Lymphocytes - chemistry</topic><topic>B-Lymphocytes - metabolism</topic><topic>Cell-free RNA</topic><topic>Chronic lymphocytic leukemia</topic><topic>Disease Progression</topic><topic>DNA Primers</topic><topic>DNA, Complementary - chemistry</topic><topic>DNA, Complementary - genetics</topic><topic>Humans</topic><topic>lncRNA</topic><topic>Lymphoma, B-Cell - blood</topic><topic>Lymphoma, B-Cell - metabolism</topic><topic>Multiple myeloma</topic><topic>Multiple Myeloma - blood</topic><topic>Multiple Myeloma - metabolism</topic><topic>Polymerase Chain Reaction</topic><topic>RNA, Long Noncoding - analysis</topic><topic>RNA, Long Noncoding - blood</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Isin, Mustafa</creatorcontrib><creatorcontrib>Ozgur, Emre</creatorcontrib><creatorcontrib>Cetin, Guven</creatorcontrib><creatorcontrib>Erten, Nilgun</creatorcontrib><creatorcontrib>Aktan, Melih</creatorcontrib><creatorcontrib>Gezer, Ugur</creatorcontrib><creatorcontrib>Dalay, Nejat</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Clinica chimica acta</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Isin, Mustafa</au><au>Ozgur, Emre</au><au>Cetin, Guven</au><au>Erten, Nilgun</au><au>Aktan, Melih</au><au>Gezer, Ugur</au><au>Dalay, Nejat</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Investigation of circulating lncRNAs in B-cell neoplasms</atitle><jtitle>Clinica chimica acta</jtitle><addtitle>Clin Chim Acta</addtitle><date>2014-04-20</date><risdate>2014</risdate><volume>431</volume><spage>255</spage><epage>259</epage><pages>255-259</pages><issn>0009-8981</issn><eissn>1873-3492</eissn><abstract>Long non-coding RNAs (lncRNA) which are longer than 200 base pairs in length, play an important role in cellular machinery. Chronic lymphocytic leukemia (CLL) and multiple myeloma (MM) are neoplasms of B-cells. In our study we aimed to investigate circulating lncRNA levels of CLL and MM patients. For this purpose we selected 5 candidate lncRNAs (TUG1, LincRNA-p21, MALAT1, HOTAIR, and GAS5) where the first two are regulated by p53. Analyses were performed by real-time PCR using cDNA synthesized from plasma RNAs. In both disease groups differential levels of plasma lncRNAs were observed. LincRNA-p21 was the only molecule displaying significant changes in the CLL group while all remaining lncRNAs showed significant differences in the MM group. In the MM group only TUG1 showed higher levels than the healthy volunteers. In conclusion, the expression levels of the candidate lncRNA molecules display a general trend for tissue- and disease-specific expression which can provide important potential biomarkers specific to the particular disease type. However, further studies are necessary to elucidate their involvement in disease development and progression.
•Expression of the lncRNA molecules is tissue- and disease-specific.•This is the first study analyzing plasma lncRNA levels in B-cell malignancies.•TUG1 expression is high and HOTAIR levels are low in patients with multiple myeloma.•Lower GAS5 and lincRNA-p21 levels are observed in CLL.</abstract><cop>Netherlands</cop><pub>Elsevier B.V</pub><pmid>24583225</pmid><doi>10.1016/j.cca.2014.02.010</doi><tpages>5</tpages></addata></record> |
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subjects | B-Lymphocytes - chemistry B-Lymphocytes - metabolism Cell-free RNA Chronic lymphocytic leukemia Disease Progression DNA Primers DNA, Complementary - chemistry DNA, Complementary - genetics Humans lncRNA Lymphoma, B-Cell - blood Lymphoma, B-Cell - metabolism Multiple myeloma Multiple Myeloma - blood Multiple Myeloma - metabolism Polymerase Chain Reaction RNA, Long Noncoding - analysis RNA, Long Noncoding - blood |
title | Investigation of circulating lncRNAs in B-cell neoplasms |
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