H-Ras forms dimers on membrane surfaces via a protein—protein interface
The lipid-anchored small GTPase Ras is an important signaling node in mammalian cells. A number of observations suggest that Ras is laterally organized within the cell membrane, and this may play a regulatory role in its activation. Lipid anchors composed of palmitoyl and farnesyl moieties in H-, N-...
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description | The lipid-anchored small GTPase Ras is an important signaling node in mammalian cells. A number of observations suggest that Ras is laterally organized within the cell membrane, and this may play a regulatory role in its activation. Lipid anchors composed of palmitoyl and farnesyl moieties in H-, N-, and K-Ras are widely suspected to be responsible for guiding protein organization in membranes. Here, we report that H-Ras forms a dimer on membrane surfaces through a protein—protein binding interface. A Y64A point mutation in the switch II region, known to prevent Son of sevenless and PI3K effector interactions, abolishes dimer formation. This suggests that the switch II region, near the nucleotide binding cleft, is either part of, or allosterically coupled to, the dimer interface. By tethering H-Ras to bilayers via a membrane-miscible lipid tail, we show that dimer formation is mediated by protein interactions and does not require lipid anchor clustering. We quantitatively characterize H-Ras dimerization in supported membranes using a combination of fluorescence correlation spectroscopy, photon counting histogram analysis, time-resolved fluorescence anisotropy, single-molecule tracking, and step photobleaching analysis. The 2D dimerization Kd is measured to be ∼1 × 103 molecules/μm2, and no higher-order oligomers were observed. Dimerization only occurs on the membrane surface; H-Ras is strictly monomeric at comparable densities in solution. Analysis of a number of H-Ras constructs, including key changes to the lipidation pattern of the hypervariable region, suggest that dimerization is a general property of native H-Ras on membrane surfaces. |
doi_str_mv | 10.1073/pnas.1321155111 |
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C. ; Groves, Jay T.</creator><creatorcontrib>Lin, Wan-Chen ; Iversen, Lars ; Tu, Hsiung-Lin ; Rhodes, Christopher ; Christensen, Sune M. ; Iwig, Jeffrey S. ; Hansen, Scott D. ; Huang, William Y. C. ; Groves, Jay T.</creatorcontrib><description>The lipid-anchored small GTPase Ras is an important signaling node in mammalian cells. A number of observations suggest that Ras is laterally organized within the cell membrane, and this may play a regulatory role in its activation. Lipid anchors composed of palmitoyl and farnesyl moieties in H-, N-, and K-Ras are widely suspected to be responsible for guiding protein organization in membranes. Here, we report that H-Ras forms a dimer on membrane surfaces through a protein—protein binding interface. A Y64A point mutation in the switch II region, known to prevent Son of sevenless and PI3K effector interactions, abolishes dimer formation. This suggests that the switch II region, near the nucleotide binding cleft, is either part of, or allosterically coupled to, the dimer interface. By tethering H-Ras to bilayers via a membrane-miscible lipid tail, we show that dimer formation is mediated by protein interactions and does not require lipid anchor clustering. We quantitatively characterize H-Ras dimerization in supported membranes using a combination of fluorescence correlation spectroscopy, photon counting histogram analysis, time-resolved fluorescence anisotropy, single-molecule tracking, and step photobleaching analysis. The 2D dimerization Kd is measured to be ∼1 × 103 molecules/μm2, and no higher-order oligomers were observed. Dimerization only occurs on the membrane surface; H-Ras is strictly monomeric at comparable densities in solution. Analysis of a number of H-Ras constructs, including key changes to the lipidation pattern of the hypervariable region, suggest that dimerization is a general property of native H-Ras on membrane surfaces.</description><identifier>ISSN: 0027-8424</identifier><identifier>EISSN: 1091-6490</identifier><identifier>DOI: 10.1073/pnas.1321155111</identifier><identifier>PMID: 24516166</identifier><language>eng</language><publisher>United States: National Academy of Sciences</publisher><subject>Amino Acid Sequence ; Anisotropy ; Biological Sciences ; Cell Membrane - metabolism ; Cell membranes ; Cellular biology ; Density ; Dimerization ; Dimers ; Fluorescence ; Fluorescence Polarization ; guanosinetriphosphatase ; Humans ; Lipids ; Magnetic Resonance Spectroscopy ; mammals ; Membranes ; Microscopy, Fluorescence ; Models, Molecular ; Molecular Sequence Data ; Mutation ; Nucleotides ; P branes ; phosphatidylinositol 3-kinase ; photobleaching ; point mutation ; Protein Conformation ; Protein Interaction Domains and Motifs - genetics ; Proteins ; ras Proteins - chemistry ; ras Proteins - metabolism ; Rotation ; spectroscopy</subject><ispartof>Proceedings of the National Academy of Sciences - PNAS, 2014-02, Vol.111 (8), p.2996-3001</ispartof><rights>copyright © 1993–2008 National Academy of Sciences of the United States of America</rights><rights>Copyright National Academy of Sciences Feb 25, 2014</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c532t-99ee8c5a3dd89f1c2cedf50aa59dba92ce6c601a3d938d92bbe40ad3ff2a80fe3</citedby><cites>FETCH-LOGICAL-c532t-99ee8c5a3dd89f1c2cedf50aa59dba92ce6c601a3d938d92bbe40ad3ff2a80fe3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Uhttp://www.pnas.org/content/111/8.cover.gif</thumbnail><linktopdf>$$Uhttps://www.jstor.org/stable/pdf/23770870$$EPDF$$P50$$Gjstor$$H</linktopdf><linktohtml>$$Uhttps://www.jstor.org/stable/23770870$$EHTML$$P50$$Gjstor$$H</linktohtml><link.rule.ids>230,314,723,776,780,799,881,27901,27902,53766,53768,57992,58225</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/24516166$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Lin, Wan-Chen</creatorcontrib><creatorcontrib>Iversen, Lars</creatorcontrib><creatorcontrib>Tu, Hsiung-Lin</creatorcontrib><creatorcontrib>Rhodes, Christopher</creatorcontrib><creatorcontrib>Christensen, Sune M.</creatorcontrib><creatorcontrib>Iwig, Jeffrey S.</creatorcontrib><creatorcontrib>Hansen, Scott D.</creatorcontrib><creatorcontrib>Huang, William Y. C.</creatorcontrib><creatorcontrib>Groves, Jay T.</creatorcontrib><title>H-Ras forms dimers on membrane surfaces via a protein—protein interface</title><title>Proceedings of the National Academy of Sciences - PNAS</title><addtitle>Proc Natl Acad Sci U S A</addtitle><description>The lipid-anchored small GTPase Ras is an important signaling node in mammalian cells. A number of observations suggest that Ras is laterally organized within the cell membrane, and this may play a regulatory role in its activation. Lipid anchors composed of palmitoyl and farnesyl moieties in H-, N-, and K-Ras are widely suspected to be responsible for guiding protein organization in membranes. Here, we report that H-Ras forms a dimer on membrane surfaces through a protein—protein binding interface. A Y64A point mutation in the switch II region, known to prevent Son of sevenless and PI3K effector interactions, abolishes dimer formation. This suggests that the switch II region, near the nucleotide binding cleft, is either part of, or allosterically coupled to, the dimer interface. By tethering H-Ras to bilayers via a membrane-miscible lipid tail, we show that dimer formation is mediated by protein interactions and does not require lipid anchor clustering. We quantitatively characterize H-Ras dimerization in supported membranes using a combination of fluorescence correlation spectroscopy, photon counting histogram analysis, time-resolved fluorescence anisotropy, single-molecule tracking, and step photobleaching analysis. The 2D dimerization Kd is measured to be ∼1 × 103 molecules/μm2, and no higher-order oligomers were observed. Dimerization only occurs on the membrane surface; H-Ras is strictly monomeric at comparable densities in solution. Analysis of a number of H-Ras constructs, including key changes to the lipidation pattern of the hypervariable region, suggest that dimerization is a general property of native H-Ras on membrane surfaces.</description><subject>Amino Acid Sequence</subject><subject>Anisotropy</subject><subject>Biological Sciences</subject><subject>Cell Membrane - metabolism</subject><subject>Cell membranes</subject><subject>Cellular biology</subject><subject>Density</subject><subject>Dimerization</subject><subject>Dimers</subject><subject>Fluorescence</subject><subject>Fluorescence Polarization</subject><subject>guanosinetriphosphatase</subject><subject>Humans</subject><subject>Lipids</subject><subject>Magnetic Resonance Spectroscopy</subject><subject>mammals</subject><subject>Membranes</subject><subject>Microscopy, Fluorescence</subject><subject>Models, Molecular</subject><subject>Molecular Sequence Data</subject><subject>Mutation</subject><subject>Nucleotides</subject><subject>P branes</subject><subject>phosphatidylinositol 3-kinase</subject><subject>photobleaching</subject><subject>point mutation</subject><subject>Protein Conformation</subject><subject>Protein Interaction Domains and Motifs - genetics</subject><subject>Proteins</subject><subject>ras Proteins - chemistry</subject><subject>ras Proteins - metabolism</subject><subject>Rotation</subject><subject>spectroscopy</subject><issn>0027-8424</issn><issn>1091-6490</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2014</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqNkc9u1DAQhy0EokvhzAlkqRcuaWf8J7EvSFUFtFIlJARny3FsyGoTL3ZSiRsP0SfkSXDYZVu4wMm25ptPnvkR8hzhFKHhZ9vR5lPkDFFKRHxAVggaq1poeEhWAKyplGDiiDzJeQ0AWip4TI6YkFhjXa_I1WX1wWYaYhoy7frBp0zjSAc_tMmOnuY5Bet8pje9pZZuU5x8P_74fru_0X6c_C_kKXkU7Cb7Z_vzmHx6--bjxWV1_f7d1cX5deUkZ1OltffKScu7TumAjjnfBQnWSt21Vpdn7WrAUtdcdZq1rRdgOx4CswqC58fk9c67ndvBd86PU7Ibs039YNM3E21v_qyM_RfzOd4YrrnWHIrg1V6Q4tfZ58kMfXZ-synzxjkbVMBBC1WLf6MSGee8HP-BAtNaMyULevIXuo5zGsvSFkoorEWzCM92lEsx5-TDYUQEs4RvlvDNXfil4-X9zRz432nfA5bOgw7RKFM-twAvdsA6TzHdCXjTgGqA_wTOX7_n</recordid><startdate>20140225</startdate><enddate>20140225</enddate><creator>Lin, Wan-Chen</creator><creator>Iversen, Lars</creator><creator>Tu, Hsiung-Lin</creator><creator>Rhodes, Christopher</creator><creator>Christensen, Sune M.</creator><creator>Iwig, Jeffrey S.</creator><creator>Hansen, Scott D.</creator><creator>Huang, William Y. 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C.</au><au>Groves, Jay T.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>H-Ras forms dimers on membrane surfaces via a protein—protein interface</atitle><jtitle>Proceedings of the National Academy of Sciences - PNAS</jtitle><addtitle>Proc Natl Acad Sci U S A</addtitle><date>2014-02-25</date><risdate>2014</risdate><volume>111</volume><issue>8</issue><spage>2996</spage><epage>3001</epage><pages>2996-3001</pages><issn>0027-8424</issn><eissn>1091-6490</eissn><abstract>The lipid-anchored small GTPase Ras is an important signaling node in mammalian cells. A number of observations suggest that Ras is laterally organized within the cell membrane, and this may play a regulatory role in its activation. Lipid anchors composed of palmitoyl and farnesyl moieties in H-, N-, and K-Ras are widely suspected to be responsible for guiding protein organization in membranes. Here, we report that H-Ras forms a dimer on membrane surfaces through a protein—protein binding interface. A Y64A point mutation in the switch II region, known to prevent Son of sevenless and PI3K effector interactions, abolishes dimer formation. This suggests that the switch II region, near the nucleotide binding cleft, is either part of, or allosterically coupled to, the dimer interface. By tethering H-Ras to bilayers via a membrane-miscible lipid tail, we show that dimer formation is mediated by protein interactions and does not require lipid anchor clustering. We quantitatively characterize H-Ras dimerization in supported membranes using a combination of fluorescence correlation spectroscopy, photon counting histogram analysis, time-resolved fluorescence anisotropy, single-molecule tracking, and step photobleaching analysis. The 2D dimerization Kd is measured to be ∼1 × 103 molecules/μm2, and no higher-order oligomers were observed. Dimerization only occurs on the membrane surface; H-Ras is strictly monomeric at comparable densities in solution. Analysis of a number of H-Ras constructs, including key changes to the lipidation pattern of the hypervariable region, suggest that dimerization is a general property of native H-Ras on membrane surfaces.</abstract><cop>United States</cop><pub>National Academy of Sciences</pub><pmid>24516166</pmid><doi>10.1073/pnas.1321155111</doi><tpages>6</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Amino Acid Sequence Anisotropy Biological Sciences Cell Membrane - metabolism Cell membranes Cellular biology Density Dimerization Dimers Fluorescence Fluorescence Polarization guanosinetriphosphatase Humans Lipids Magnetic Resonance Spectroscopy mammals Membranes Microscopy, Fluorescence Models, Molecular Molecular Sequence Data Mutation Nucleotides P branes phosphatidylinositol 3-kinase photobleaching point mutation Protein Conformation Protein Interaction Domains and Motifs - genetics Proteins ras Proteins - chemistry ras Proteins - metabolism Rotation spectroscopy |
title | H-Ras forms dimers on membrane surfaces via a protein—protein interface |
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