Genetic identification of a novel locus, ACCELERATED FLOWERING 1 that controls chromatin modification associated with histone H3 lysine 27 trimethylation in Arabidopsis thaliana
Flowering on time is a critically important for successful reproduction of plants. Here we report an early-flowering mutant in Arabidopsis thaliana, accelerated flowering 1-1D (afl1-1D) that exhibited pleiotropic developmental defects including semi-dwarfism, curly leaf, and increased branching. Gen...
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Veröffentlicht in: | Plant science (Limerick) 2013-07, Vol.208, p.20-27 |
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creator | Lee, Sumin Shin, Kihye Lee, Inhye Song, Hae-Ryong Noh, Yoo-Sun Lee, Rin-A Lee, Seungjun Kim, Soo-Young Park, Soon Ki Lee, Sunghoon Soh, Moon-Soo |
description | Flowering on time is a critically important for successful reproduction of plants. Here we report an early-flowering mutant in Arabidopsis thaliana, accelerated flowering 1-1D (afl1-1D) that exhibited pleiotropic developmental defects including semi-dwarfism, curly leaf, and increased branching. Genetic analysis showed that afl1-1D mutant is a single, dominant mutant. Chromosomal mapping indicates that AFL1 resides at the middle of chromosome 4, around which no known flowering-related genes have been characterized. Expression analysis and double mutant studies with late flowering mutants in various floral pathways indicated that elevated FT is responsible for the early-flowering of afl1-1D mutant. Interestingly, not only flowering-related genes, but also several floral homeotic genes were ectopically overexpressed in the afl1-1D mutants in both FT-dependent and -independent manner. The degree of histone H3 Lys27-trimethylation (H3K27me3) was reduced in several chromatin including FT, FLC, AG and SEP3 in the afl1-1D, suggesting that afl1-1D might be involved in chromatin modification. In support, double mutant analysis of afl1-1D and lhp1-4 revealed epistatic interaction between afl1-1D and lhp1-4 in regard to flowering control. Taken together, we propose that AFL1 regulate various aspect of development through chromatin modification, particularly associated with H3K27me3 in A. thaliana. |
doi_str_mv | 10.1016/j.plantsci.2013.03.009 |
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Here we report an early-flowering mutant in Arabidopsis thaliana, accelerated flowering 1-1D (afl1-1D) that exhibited pleiotropic developmental defects including semi-dwarfism, curly leaf, and increased branching. Genetic analysis showed that afl1-1D mutant is a single, dominant mutant. Chromosomal mapping indicates that AFL1 resides at the middle of chromosome 4, around which no known flowering-related genes have been characterized. Expression analysis and double mutant studies with late flowering mutants in various floral pathways indicated that elevated FT is responsible for the early-flowering of afl1-1D mutant. Interestingly, not only flowering-related genes, but also several floral homeotic genes were ectopically overexpressed in the afl1-1D mutants in both FT-dependent and -independent manner. The degree of histone H3 Lys27-trimethylation (H3K27me3) was reduced in several chromatin including FT, FLC, AG and SEP3 in the afl1-1D, suggesting that afl1-1D might be involved in chromatin modification. In support, double mutant analysis of afl1-1D and lhp1-4 revealed epistatic interaction between afl1-1D and lhp1-4 in regard to flowering control. Taken together, we propose that AFL1 regulate various aspect of development through chromatin modification, particularly associated with H3K27me3 in A. thaliana.</description><identifier>ISSN: 0168-9452</identifier><identifier>EISSN: 1873-2259</identifier><identifier>DOI: 10.1016/j.plantsci.2013.03.009</identifier><identifier>PMID: 23683925</identifier><language>eng</language><publisher>Ireland: Elsevier Ireland Ltd</publisher><subject>Afl1-1D ; Arabidopsis - genetics ; Arabidopsis - physiology ; Arabidopsis Proteins - genetics ; Arabidopsis Proteins - metabolism ; Arabidopsis thaliana ; branching ; chromatin ; Chromatin - metabolism ; Chromatin modification ; Early flowering ; Epistasis, Genetic ; flowering ; Flowers - genetics ; Flowers - physiology ; Gene Expression Regulation, Plant ; gene overexpression ; Genes, Plant ; Genetic Loci - genetics ; Genetic Pleiotropy ; H3K27me3 ; histones ; Histones - metabolism ; Homeodomain Proteins - genetics ; Homeodomain Proteins - metabolism ; homeotic genes ; leaves ; loci ; lysine ; Lysine - metabolism ; Methylation ; mutants ; Mutation - genetics ; Phenotype ; Physical Chromosome Mapping ; plant reproduction</subject><ispartof>Plant science (Limerick), 2013-07, Vol.208, p.20-27</ispartof><rights>2013 Elsevier Ireland Ltd</rights><rights>Copyright © 2013 Elsevier Ireland Ltd. All rights reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c449t-3ff72d882beb11e5bf9fec4fd7f2a9ffb4b850a63ca33aa02dc6c1950a273fb53</citedby><cites>FETCH-LOGICAL-c449t-3ff72d882beb11e5bf9fec4fd7f2a9ffb4b850a63ca33aa02dc6c1950a273fb53</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S0168945213000654$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,776,780,3537,27901,27902,65534</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/23683925$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Lee, Sumin</creatorcontrib><creatorcontrib>Shin, Kihye</creatorcontrib><creatorcontrib>Lee, Inhye</creatorcontrib><creatorcontrib>Song, Hae-Ryong</creatorcontrib><creatorcontrib>Noh, Yoo-Sun</creatorcontrib><creatorcontrib>Lee, Rin-A</creatorcontrib><creatorcontrib>Lee, Seungjun</creatorcontrib><creatorcontrib>Kim, Soo-Young</creatorcontrib><creatorcontrib>Park, Soon Ki</creatorcontrib><creatorcontrib>Lee, Sunghoon</creatorcontrib><creatorcontrib>Soh, Moon-Soo</creatorcontrib><title>Genetic identification of a novel locus, ACCELERATED FLOWERING 1 that controls chromatin modification associated with histone H3 lysine 27 trimethylation in Arabidopsis thaliana</title><title>Plant science (Limerick)</title><addtitle>Plant Sci</addtitle><description>Flowering on time is a critically important for successful reproduction of plants. Here we report an early-flowering mutant in Arabidopsis thaliana, accelerated flowering 1-1D (afl1-1D) that exhibited pleiotropic developmental defects including semi-dwarfism, curly leaf, and increased branching. Genetic analysis showed that afl1-1D mutant is a single, dominant mutant. Chromosomal mapping indicates that AFL1 resides at the middle of chromosome 4, around which no known flowering-related genes have been characterized. Expression analysis and double mutant studies with late flowering mutants in various floral pathways indicated that elevated FT is responsible for the early-flowering of afl1-1D mutant. Interestingly, not only flowering-related genes, but also several floral homeotic genes were ectopically overexpressed in the afl1-1D mutants in both FT-dependent and -independent manner. The degree of histone H3 Lys27-trimethylation (H3K27me3) was reduced in several chromatin including FT, FLC, AG and SEP3 in the afl1-1D, suggesting that afl1-1D might be involved in chromatin modification. In support, double mutant analysis of afl1-1D and lhp1-4 revealed epistatic interaction between afl1-1D and lhp1-4 in regard to flowering control. Taken together, we propose that AFL1 regulate various aspect of development through chromatin modification, particularly associated with H3K27me3 in A. thaliana.</description><subject>Afl1-1D</subject><subject>Arabidopsis - genetics</subject><subject>Arabidopsis - physiology</subject><subject>Arabidopsis Proteins - genetics</subject><subject>Arabidopsis Proteins - metabolism</subject><subject>Arabidopsis thaliana</subject><subject>branching</subject><subject>chromatin</subject><subject>Chromatin - metabolism</subject><subject>Chromatin modification</subject><subject>Early flowering</subject><subject>Epistasis, Genetic</subject><subject>flowering</subject><subject>Flowers - genetics</subject><subject>Flowers - physiology</subject><subject>Gene Expression Regulation, Plant</subject><subject>gene overexpression</subject><subject>Genes, Plant</subject><subject>Genetic Loci - genetics</subject><subject>Genetic Pleiotropy</subject><subject>H3K27me3</subject><subject>histones</subject><subject>Histones - metabolism</subject><subject>Homeodomain Proteins - genetics</subject><subject>Homeodomain Proteins - metabolism</subject><subject>homeotic genes</subject><subject>leaves</subject><subject>loci</subject><subject>lysine</subject><subject>Lysine - metabolism</subject><subject>Methylation</subject><subject>mutants</subject><subject>Mutation - genetics</subject><subject>Phenotype</subject><subject>Physical Chromosome Mapping</subject><subject>plant reproduction</subject><issn>0168-9452</issn><issn>1873-2259</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2013</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkstu1DAUhiMEokPhFYqXLMjgay47RkM6rTSiUmnF0nKcY-JRJh5sT9E8Fm-Io7Swo9KRbFnf-c_ld5ZdELwkmBSfdsvDoMYYtF1STNgSp8D1i2xBqpLllIr6ZbZIYJXXXNCz7E0IO4wxFaJ8nZ1RVlSspmKR_d7ACNFqZDsYozVWq2jdiJxBCo3uAQY0OH0MH9FqvW62ze3qrvmCLrc335vb668bRFDsVUTajdG7ISDde7dPEiPau-6fnArBaasidOiXjT3qbYhuBHTF0HAKNt1oiaK3e4j9aZhzksbKq9Z27hBsmOoMVo3qbfbKqCHAu8fzPLu_bO7WV_n2ZnO9Xm1zzXkdc2ZMSbuqoi20hIBoTW1Ac9OVhqramJa3lcCqYFoxphSmnS40qdMTLZlpBTvPPsy6B-9-HiFEubdBw5DWDu4YJBGEMio4KZ5HmWC8KrioE1rMqPYuBA9GHtLUyp8kwXJyVu7kk7NyclbiFHhKvHiscWz30P1Ne7IyAe9nwCgn1Q9vg7z_lhR4sp1jXv-foOnLTIN8nglIi32w4GVqA0YNnfWgo-ycfa7PP3P6zOA</recordid><startdate>20130701</startdate><enddate>20130701</enddate><creator>Lee, Sumin</creator><creator>Shin, Kihye</creator><creator>Lee, Inhye</creator><creator>Song, Hae-Ryong</creator><creator>Noh, Yoo-Sun</creator><creator>Lee, Rin-A</creator><creator>Lee, Seungjun</creator><creator>Kim, Soo-Young</creator><creator>Park, Soon Ki</creator><creator>Lee, Sunghoon</creator><creator>Soh, Moon-Soo</creator><general>Elsevier Ireland Ltd</general><scope>FBQ</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>8FD</scope><scope>FR3</scope><scope>P64</scope><scope>RC3</scope></search><sort><creationdate>20130701</creationdate><title>Genetic identification of a novel locus, ACCELERATED FLOWERING 1 that controls chromatin modification associated with histone H3 lysine 27 trimethylation in Arabidopsis thaliana</title><author>Lee, Sumin ; Shin, Kihye ; Lee, Inhye ; Song, Hae-Ryong ; Noh, Yoo-Sun ; Lee, Rin-A ; Lee, Seungjun ; Kim, Soo-Young ; Park, Soon Ki ; Lee, Sunghoon ; Soh, Moon-Soo</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c449t-3ff72d882beb11e5bf9fec4fd7f2a9ffb4b850a63ca33aa02dc6c1950a273fb53</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2013</creationdate><topic>Afl1-1D</topic><topic>Arabidopsis - genetics</topic><topic>Arabidopsis - physiology</topic><topic>Arabidopsis Proteins - genetics</topic><topic>Arabidopsis Proteins - metabolism</topic><topic>Arabidopsis thaliana</topic><topic>branching</topic><topic>chromatin</topic><topic>Chromatin - metabolism</topic><topic>Chromatin modification</topic><topic>Early flowering</topic><topic>Epistasis, Genetic</topic><topic>flowering</topic><topic>Flowers - genetics</topic><topic>Flowers - physiology</topic><topic>Gene Expression Regulation, Plant</topic><topic>gene overexpression</topic><topic>Genes, Plant</topic><topic>Genetic Loci - genetics</topic><topic>Genetic Pleiotropy</topic><topic>H3K27me3</topic><topic>histones</topic><topic>Histones - metabolism</topic><topic>Homeodomain Proteins - genetics</topic><topic>Homeodomain Proteins - metabolism</topic><topic>homeotic genes</topic><topic>leaves</topic><topic>loci</topic><topic>lysine</topic><topic>Lysine - metabolism</topic><topic>Methylation</topic><topic>mutants</topic><topic>Mutation - genetics</topic><topic>Phenotype</topic><topic>Physical Chromosome Mapping</topic><topic>plant reproduction</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Lee, Sumin</creatorcontrib><creatorcontrib>Shin, Kihye</creatorcontrib><creatorcontrib>Lee, Inhye</creatorcontrib><creatorcontrib>Song, Hae-Ryong</creatorcontrib><creatorcontrib>Noh, Yoo-Sun</creatorcontrib><creatorcontrib>Lee, Rin-A</creatorcontrib><creatorcontrib>Lee, Seungjun</creatorcontrib><creatorcontrib>Kim, Soo-Young</creatorcontrib><creatorcontrib>Park, Soon Ki</creatorcontrib><creatorcontrib>Lee, Sunghoon</creatorcontrib><creatorcontrib>Soh, Moon-Soo</creatorcontrib><collection>AGRIS</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><jtitle>Plant science (Limerick)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Lee, Sumin</au><au>Shin, Kihye</au><au>Lee, Inhye</au><au>Song, Hae-Ryong</au><au>Noh, Yoo-Sun</au><au>Lee, Rin-A</au><au>Lee, Seungjun</au><au>Kim, Soo-Young</au><au>Park, Soon Ki</au><au>Lee, Sunghoon</au><au>Soh, Moon-Soo</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Genetic identification of a novel locus, ACCELERATED FLOWERING 1 that controls chromatin modification associated with histone H3 lysine 27 trimethylation in Arabidopsis thaliana</atitle><jtitle>Plant science (Limerick)</jtitle><addtitle>Plant Sci</addtitle><date>2013-07-01</date><risdate>2013</risdate><volume>208</volume><spage>20</spage><epage>27</epage><pages>20-27</pages><issn>0168-9452</issn><eissn>1873-2259</eissn><abstract>Flowering on time is a critically important for successful reproduction of plants. Here we report an early-flowering mutant in Arabidopsis thaliana, accelerated flowering 1-1D (afl1-1D) that exhibited pleiotropic developmental defects including semi-dwarfism, curly leaf, and increased branching. Genetic analysis showed that afl1-1D mutant is a single, dominant mutant. Chromosomal mapping indicates that AFL1 resides at the middle of chromosome 4, around which no known flowering-related genes have been characterized. Expression analysis and double mutant studies with late flowering mutants in various floral pathways indicated that elevated FT is responsible for the early-flowering of afl1-1D mutant. Interestingly, not only flowering-related genes, but also several floral homeotic genes were ectopically overexpressed in the afl1-1D mutants in both FT-dependent and -independent manner. The degree of histone H3 Lys27-trimethylation (H3K27me3) was reduced in several chromatin including FT, FLC, AG and SEP3 in the afl1-1D, suggesting that afl1-1D might be involved in chromatin modification. In support, double mutant analysis of afl1-1D and lhp1-4 revealed epistatic interaction between afl1-1D and lhp1-4 in regard to flowering control. Taken together, we propose that AFL1 regulate various aspect of development through chromatin modification, particularly associated with H3K27me3 in A. thaliana.</abstract><cop>Ireland</cop><pub>Elsevier Ireland Ltd</pub><pmid>23683925</pmid><doi>10.1016/j.plantsci.2013.03.009</doi><tpages>8</tpages></addata></record> |
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subjects | Afl1-1D Arabidopsis - genetics Arabidopsis - physiology Arabidopsis Proteins - genetics Arabidopsis Proteins - metabolism Arabidopsis thaliana branching chromatin Chromatin - metabolism Chromatin modification Early flowering Epistasis, Genetic flowering Flowers - genetics Flowers - physiology Gene Expression Regulation, Plant gene overexpression Genes, Plant Genetic Loci - genetics Genetic Pleiotropy H3K27me3 histones Histones - metabolism Homeodomain Proteins - genetics Homeodomain Proteins - metabolism homeotic genes leaves loci lysine Lysine - metabolism Methylation mutants Mutation - genetics Phenotype Physical Chromosome Mapping plant reproduction |
title | Genetic identification of a novel locus, ACCELERATED FLOWERING 1 that controls chromatin modification associated with histone H3 lysine 27 trimethylation in Arabidopsis thaliana |
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