Dynamic Changes in the Composite Microbial System MC1 During and Following its Rapid Degradation of Lignocellulose
To monitor the dynamics of the composite microbial system MC1 during its degradation of lignocellulose and to improve our understanding of the microbial communities involved in this biomass conversion, MC1 was characterized at eight time points over an 18-day, thermophilic, aerobic, static cultivati...
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| Veröffentlicht in: | Applied biochemistry and biotechnology 2014-01, Vol.172 (2), p.951-962 |
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| creator | Hua, Binbin Lü, Yucai Wang, Jungang Wen, Boting Cao, Yanzhuan Wang, Xiaofen Cui, Zongjun |
| description | To monitor the dynamics of the composite microbial system MC1 during its degradation of lignocellulose and to improve our understanding of the microbial communities involved in this biomass conversion, MC1 was characterized at eight time points over an 18-day, thermophilic, aerobic, static cultivation. We found the microbial communities to be dynamic, rhythmic consortia capable of changing in response to lignocellulose degradation. The growth curve over 18 days was M-shaped. Based on the quantitative changes in five major components of MC1 (Clostridium straminisolvens CSK-1, Clostridium sp. FG4, Pseudoxanthomonas sp. M1-3, Brevibacillus sp. M1-5, and Bordetella sp. M1-6), reduction in rice straw weight, cellulase (CMCase) activity, xylanase activity, and changes in medium pH, we found that the process comprised two identifiable phases. Rapid degradation occurred from day 0 to day 9, while the post-rapid degradation phase included days 10 to 18. Day 3 and day 12 were two key time points in the rapid degradation phase and post-rapid degradation phase, respectively. Two anaerobes, C. straminisolvens CSK-1 and Clostridium sp. FG4, dominated the MC1 system from day 0 to day 18. |
| doi_str_mv | 10.1007/s12010-013-0566-7 |
| format | Article |
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We found the microbial communities to be dynamic, rhythmic consortia capable of changing in response to lignocellulose degradation. The growth curve over 18 days was M-shaped. Based on the quantitative changes in five major components of MC1 (Clostridium straminisolvens CSK-1, Clostridium sp. FG4, Pseudoxanthomonas sp. M1-3, Brevibacillus sp. M1-5, and Bordetella sp. M1-6), reduction in rice straw weight, cellulase (CMCase) activity, xylanase activity, and changes in medium pH, we found that the process comprised two identifiable phases. Rapid degradation occurred from day 0 to day 9, while the post-rapid degradation phase included days 10 to 18. Day 3 and day 12 were two key time points in the rapid degradation phase and post-rapid degradation phase, respectively. Two anaerobes, C. straminisolvens CSK-1 and Clostridium sp. FG4, dominated the MC1 system from day 0 to day 18.</description><identifier>ISSN: 0273-2289</identifier><identifier>EISSN: 1559-0291</identifier><identifier>DOI: 10.1007/s12010-013-0566-7</identifier><identifier>PMID: 24122707</identifier><identifier>CODEN: ABIBDL</identifier><language>eng</language><publisher>Boston: Springer-Verlag</publisher><subject>anaerobes ; Bacterial Proteins - metabolism ; Biochemistry ; Biodegradation ; Biodegradation, Environmental ; Biological and medical sciences ; Biotechnology ; Bordetella ; Brevibacillus ; Carboxylic Acids - metabolism ; Cellulase - metabolism ; Chemistry ; Chemistry and Materials Science ; Clostridium ; Community involvement ; Culture Media - chemistry ; Degradation ; Endo-1,4-beta Xylanases - metabolism ; endo-1,4-beta-glucanase ; Fundamental and applied biological sciences. Psychology ; Hydrogen-Ion Concentration ; Lignin - metabolism ; Lignocellulose ; Microbial activity ; microbial communities ; Microbiology ; Microbiota ; Oryza - chemistry ; Oryza sativa ; Pseudoxanthomonas ; Rice ; Rice straw ; RNA, Ribosomal, 16S - genetics ; Waste materials ; Waste Products - analysis ; xylanases ; Zea mays - chemistry</subject><ispartof>Applied biochemistry and biotechnology, 2014-01, Vol.172 (2), p.951-962</ispartof><rights>Springer Science+Business Media New York 2013</rights><rights>2015 INIST-CNRS</rights><rights>Springer Science+Business Media New York 2014</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c525t-c5e3ca8a4358765d2dfeb7dbcee6a876528dffccf43e1f4996368c3baf47d9953</citedby><cites>FETCH-LOGICAL-c525t-c5e3ca8a4358765d2dfeb7dbcee6a876528dffccf43e1f4996368c3baf47d9953</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s12010-013-0566-7$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s12010-013-0566-7$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,776,780,27901,27902,41464,42533,51294</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=28562450$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/24122707$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Hua, Binbin</creatorcontrib><creatorcontrib>Lü, Yucai</creatorcontrib><creatorcontrib>Wang, Jungang</creatorcontrib><creatorcontrib>Wen, Boting</creatorcontrib><creatorcontrib>Cao, Yanzhuan</creatorcontrib><creatorcontrib>Wang, Xiaofen</creatorcontrib><creatorcontrib>Cui, Zongjun</creatorcontrib><title>Dynamic Changes in the Composite Microbial System MC1 During and Following its Rapid Degradation of Lignocellulose</title><title>Applied biochemistry and biotechnology</title><addtitle>Appl Biochem Biotechnol</addtitle><addtitle>Appl Biochem Biotechnol</addtitle><description>To monitor the dynamics of the composite microbial system MC1 during its degradation of lignocellulose and to improve our understanding of the microbial communities involved in this biomass conversion, MC1 was characterized at eight time points over an 18-day, thermophilic, aerobic, static cultivation. We found the microbial communities to be dynamic, rhythmic consortia capable of changing in response to lignocellulose degradation. The growth curve over 18 days was M-shaped. Based on the quantitative changes in five major components of MC1 (Clostridium straminisolvens CSK-1, Clostridium sp. FG4, Pseudoxanthomonas sp. M1-3, Brevibacillus sp. M1-5, and Bordetella sp. M1-6), reduction in rice straw weight, cellulase (CMCase) activity, xylanase activity, and changes in medium pH, we found that the process comprised two identifiable phases. Rapid degradation occurred from day 0 to day 9, while the post-rapid degradation phase included days 10 to 18. Day 3 and day 12 were two key time points in the rapid degradation phase and post-rapid degradation phase, respectively. Two anaerobes, C. straminisolvens CSK-1 and Clostridium sp. FG4, dominated the MC1 system from day 0 to day 18.</description><subject>anaerobes</subject><subject>Bacterial Proteins - metabolism</subject><subject>Biochemistry</subject><subject>Biodegradation</subject><subject>Biodegradation, Environmental</subject><subject>Biological and medical sciences</subject><subject>Biotechnology</subject><subject>Bordetella</subject><subject>Brevibacillus</subject><subject>Carboxylic Acids - metabolism</subject><subject>Cellulase - metabolism</subject><subject>Chemistry</subject><subject>Chemistry and Materials Science</subject><subject>Clostridium</subject><subject>Community involvement</subject><subject>Culture Media - chemistry</subject><subject>Degradation</subject><subject>Endo-1,4-beta Xylanases - metabolism</subject><subject>endo-1,4-beta-glucanase</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Hydrogen-Ion Concentration</subject><subject>Lignin - metabolism</subject><subject>Lignocellulose</subject><subject>Microbial activity</subject><subject>microbial communities</subject><subject>Microbiology</subject><subject>Microbiota</subject><subject>Oryza - chemistry</subject><subject>Oryza sativa</subject><subject>Pseudoxanthomonas</subject><subject>Rice</subject><subject>Rice straw</subject><subject>RNA, Ribosomal, 16S - genetics</subject><subject>Waste materials</subject><subject>Waste Products - analysis</subject><subject>xylanases</subject><subject>Zea mays - chemistry</subject><issn>0273-2289</issn><issn>1559-0291</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2014</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>BENPR</sourceid><recordid>eNqNkU2L1TAYhYMozvXqD3CjARHcVN8kTdIuh15HhTsIjrMOaZp0MrRNTVrk_ntbev3AhbhJSHjOeU9yEHpO4C0BkO8SoUAgA8Iy4EJk8gHaEc7LDGhJHqIdUMkySovyAj1J6R6A0ILLx-iC5oRSCXKH4uE06N4bXN3pobUJ-wFPdxZXoR9D8pPF197EUHvd4ZtTmmyPryuCD3P0Q4v10OCr0HXh-3ryU8Jf9OgbfLBt1I2efBhwcPjo2yEY23VzF5J9ih453SX77Lzv0e3V-6_Vx-z4-cOn6vKYGU75tKyWGV3onPFCCt7QxtlaNrWxVuj1hhaNc8a4nFni8rIUTBSG1drlsilLzvbozeY7xvBttmlSvU9rCj3YMCdFOIEciBT0P1DgjBYgYEFf_YXehzkOy0MUkRJyKtYke0Q2avm7lKJ1aoy-1_GkCKi1O7V1p5bu1Nqdkovmxdl5rnvb_FL8LGsBXp8BnYzuXNSD8ek3V3BBc75GpBuXxrUlG_-I-I_pLzeR00HpNi7GtzcLlAMAp1II9gOPc7mT</recordid><startdate>20140101</startdate><enddate>20140101</enddate><creator>Hua, Binbin</creator><creator>Lü, Yucai</creator><creator>Wang, Jungang</creator><creator>Wen, Boting</creator><creator>Cao, Yanzhuan</creator><creator>Wang, Xiaofen</creator><creator>Cui, Zongjun</creator><general>Springer-Verlag</general><general>Springer US</general><general>Springer</general><general>Springer Nature B.V</general><scope>FBQ</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7ST</scope><scope>7T7</scope><scope>7TM</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>88I</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M2P</scope><scope>M7P</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>Q9U</scope><scope>RC3</scope><scope>SOI</scope><scope>7QO</scope><scope>7X8</scope></search><sort><creationdate>20140101</creationdate><title>Dynamic Changes in the Composite Microbial System MC1 During and Following its Rapid Degradation of Lignocellulose</title><author>Hua, Binbin ; Lü, Yucai ; Wang, Jungang ; Wen, Boting ; Cao, Yanzhuan ; Wang, Xiaofen ; Cui, Zongjun</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c525t-c5e3ca8a4358765d2dfeb7dbcee6a876528dffccf43e1f4996368c3baf47d9953</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2014</creationdate><topic>anaerobes</topic><topic>Bacterial Proteins - metabolism</topic><topic>Biochemistry</topic><topic>Biodegradation</topic><topic>Biodegradation, Environmental</topic><topic>Biological and medical sciences</topic><topic>Biotechnology</topic><topic>Bordetella</topic><topic>Brevibacillus</topic><topic>Carboxylic Acids - metabolism</topic><topic>Cellulase - metabolism</topic><topic>Chemistry</topic><topic>Chemistry and Materials Science</topic><topic>Clostridium</topic><topic>Community involvement</topic><topic>Culture Media - chemistry</topic><topic>Degradation</topic><topic>Endo-1,4-beta Xylanases - metabolism</topic><topic>endo-1,4-beta-glucanase</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Hydrogen-Ion Concentration</topic><topic>Lignin - metabolism</topic><topic>Lignocellulose</topic><topic>Microbial activity</topic><topic>microbial communities</topic><topic>Microbiology</topic><topic>Microbiota</topic><topic>Oryza - chemistry</topic><topic>Oryza sativa</topic><topic>Pseudoxanthomonas</topic><topic>Rice</topic><topic>Rice straw</topic><topic>RNA, Ribosomal, 16S - genetics</topic><topic>Waste materials</topic><topic>Waste Products - analysis</topic><topic>xylanases</topic><topic>Zea mays - chemistry</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Hua, Binbin</creatorcontrib><creatorcontrib>Lü, Yucai</creatorcontrib><creatorcontrib>Wang, Jungang</creatorcontrib><creatorcontrib>Wen, Boting</creatorcontrib><creatorcontrib>Cao, Yanzhuan</creatorcontrib><creatorcontrib>Wang, Xiaofen</creatorcontrib><creatorcontrib>Cui, Zongjun</creatorcontrib><collection>AGRIS</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Environment Abstracts</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Nucleic Acids Abstracts</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Science Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Science Database</collection><collection>Biological Science Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central Basic</collection><collection>Genetics Abstracts</collection><collection>Environment Abstracts</collection><collection>Biotechnology Research Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Applied biochemistry and biotechnology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Hua, Binbin</au><au>Lü, Yucai</au><au>Wang, Jungang</au><au>Wen, Boting</au><au>Cao, Yanzhuan</au><au>Wang, Xiaofen</au><au>Cui, Zongjun</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Dynamic Changes in the Composite Microbial System MC1 During and Following its Rapid Degradation of Lignocellulose</atitle><jtitle>Applied biochemistry and biotechnology</jtitle><stitle>Appl Biochem Biotechnol</stitle><addtitle>Appl Biochem Biotechnol</addtitle><date>2014-01-01</date><risdate>2014</risdate><volume>172</volume><issue>2</issue><spage>951</spage><epage>962</epage><pages>951-962</pages><issn>0273-2289</issn><eissn>1559-0291</eissn><coden>ABIBDL</coden><abstract>To monitor the dynamics of the composite microbial system MC1 during its degradation of lignocellulose and to improve our understanding of the microbial communities involved in this biomass conversion, MC1 was characterized at eight time points over an 18-day, thermophilic, aerobic, static cultivation. We found the microbial communities to be dynamic, rhythmic consortia capable of changing in response to lignocellulose degradation. The growth curve over 18 days was M-shaped. Based on the quantitative changes in five major components of MC1 (Clostridium straminisolvens CSK-1, Clostridium sp. FG4, Pseudoxanthomonas sp. M1-3, Brevibacillus sp. M1-5, and Bordetella sp. M1-6), reduction in rice straw weight, cellulase (CMCase) activity, xylanase activity, and changes in medium pH, we found that the process comprised two identifiable phases. Rapid degradation occurred from day 0 to day 9, while the post-rapid degradation phase included days 10 to 18. Day 3 and day 12 were two key time points in the rapid degradation phase and post-rapid degradation phase, respectively. Two anaerobes, C. straminisolvens CSK-1 and Clostridium sp. FG4, dominated the MC1 system from day 0 to day 18.</abstract><cop>Boston</cop><pub>Springer-Verlag</pub><pmid>24122707</pmid><doi>10.1007/s12010-013-0566-7</doi><tpages>12</tpages></addata></record> |
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| subjects | anaerobes Bacterial Proteins - metabolism Biochemistry Biodegradation Biodegradation, Environmental Biological and medical sciences Biotechnology Bordetella Brevibacillus Carboxylic Acids - metabolism Cellulase - metabolism Chemistry Chemistry and Materials Science Clostridium Community involvement Culture Media - chemistry Degradation Endo-1,4-beta Xylanases - metabolism endo-1,4-beta-glucanase Fundamental and applied biological sciences. Psychology Hydrogen-Ion Concentration Lignin - metabolism Lignocellulose Microbial activity microbial communities Microbiology Microbiota Oryza - chemistry Oryza sativa Pseudoxanthomonas Rice Rice straw RNA, Ribosomal, 16S - genetics Waste materials Waste Products - analysis xylanases Zea mays - chemistry |
| title | Dynamic Changes in the Composite Microbial System MC1 During and Following its Rapid Degradation of Lignocellulose |
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