Bioaugmentation with Distinct Dehalobacter Strains Achieves Chloroform Detoxification in Microcosms
Chloroform (CF) is a widespread groundwater contaminant not susceptible to aerobic degradation. Under anoxic conditions, CF can undergo abiotic and cometabolic transformation but detoxification is generally not achieved. The recent discovery of distinct Dehalobacter strains that respire CF to dichlo...
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description | Chloroform (CF) is a widespread groundwater contaminant not susceptible to aerobic degradation. Under anoxic conditions, CF can undergo abiotic and cometabolic transformation but detoxification is generally not achieved. The recent discovery of distinct Dehalobacter strains that respire CF to dichloromethane (DCM) and ferment DCM to nonchlorinated products promises that bioremediation of CF plumes is feasible. To track both strains, 16S rRNA gene-based qPCR assays specific for either Dehalobacter strain were designed and validated. A laboratory treatability study explored the value of bioaugmentation and biostimulation to achieve CF detoxification using anoxic microcosms established with aquifer material from a CF-contaminated site. Microcosms that received 6% (v/v) of the CF-to-DCM-dechlorinating culture Dhb-CF to achieve an initial Dehalobacter cell titer of 1.6 ± 0.9 × 104 mL–1 dechlorinated CF to stoichiometric amounts of DCM. Subsequent augmentation with 3% (v/v) of the DCM-degrading consortium RM to an initial Dehalobacter cell abundance of 1.2 ± 0.2 × 102 mL–1 achieved complete DCM degradation in microcosms amended with 10 mM bicarbonate. Growth of the CF-respiring and the DCM-degrading Dehalobacter populations and detoxification were also observed in microcosms that received both inocula simultaneously. These findings suggest that anaerobic bioremediation (e.g., bioaugmentation) is a possible remedy at CF- and DCM-contaminated sites without CT, which strongly inhibited CF organohalide respiration and DCM organohalide fermentation. |
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Erin ; Griffiths, Daniel R ; Tang, Shuiquan ; Edwards, Elizabeth A ; Löffler, Frank E</creator><creatorcontrib>Justicia-Leon, Shandra D ; Higgins, Steven ; Mack, E. Erin ; Griffiths, Daniel R ; Tang, Shuiquan ; Edwards, Elizabeth A ; Löffler, Frank E</creatorcontrib><description>Chloroform (CF) is a widespread groundwater contaminant not susceptible to aerobic degradation. Under anoxic conditions, CF can undergo abiotic and cometabolic transformation but detoxification is generally not achieved. The recent discovery of distinct Dehalobacter strains that respire CF to dichloromethane (DCM) and ferment DCM to nonchlorinated products promises that bioremediation of CF plumes is feasible. To track both strains, 16S rRNA gene-based qPCR assays specific for either Dehalobacter strain were designed and validated. A laboratory treatability study explored the value of bioaugmentation and biostimulation to achieve CF detoxification using anoxic microcosms established with aquifer material from a CF-contaminated site. Microcosms that received 6% (v/v) of the CF-to-DCM-dechlorinating culture Dhb-CF to achieve an initial Dehalobacter cell titer of 1.6 ± 0.9 × 104 mL–1 dechlorinated CF to stoichiometric amounts of DCM. Subsequent augmentation with 3% (v/v) of the DCM-degrading consortium RM to an initial Dehalobacter cell abundance of 1.2 ± 0.2 × 102 mL–1 achieved complete DCM degradation in microcosms amended with 10 mM bicarbonate. Growth of the CF-respiring and the DCM-degrading Dehalobacter populations and detoxification were also observed in microcosms that received both inocula simultaneously. These findings suggest that anaerobic bioremediation (e.g., bioaugmentation) is a possible remedy at CF- and DCM-contaminated sites without CT, which strongly inhibited CF organohalide respiration and DCM organohalide fermentation.</description><identifier>ISSN: 0013-936X</identifier><identifier>EISSN: 1520-5851</identifier><identifier>DOI: 10.1021/es403582f</identifier><identifier>PMID: 24392834</identifier><identifier>CODEN: ESTHAG</identifier><language>eng</language><publisher>Washington, DC: American Chemical Society</publisher><subject>Applied sciences ; Biodegradation of pollutants ; Biodegradation, Environmental ; Biological and medical sciences ; Bioremediation ; Biotechnology ; Chloroform - metabolism ; Decontamination. Miscellaneous ; Dehalobacter ; Earth sciences ; Earth, ocean, space ; Engineering and environment geology. Geothermics ; Environment and pollution ; Environmental conditions ; Exact sciences and technology ; Feasibility Studies ; Fermentation ; Fundamental and applied biological sciences. Psychology ; Groundwater ; Groundwaters ; Halogenation ; Industrial applications and implications. Economical aspects ; Methylene Chloride - metabolism ; Microbial Consortia ; Natural water pollution ; Peptococcaceae - metabolism ; Pollution ; Pollution, environment geology ; RNA, Ribosomal, 16S - chemistry ; Soil and sediments pollution ; Water flow ; Water Pollutants, Chemical - metabolism ; Water treatment and pollution</subject><ispartof>Environmental science & technology, 2014-02, Vol.48 (3), p.1851-1858</ispartof><rights>Copyright © 2014 American Chemical Society</rights><rights>2015 INIST-CNRS</rights><rights>Copyright American Chemical Society Feb 4, 2014</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-a406t-9b6acd743a62fa82a86cb54ed99bb89517c7173372b6b4bf85d4cabd658ba5d23</citedby><cites>FETCH-LOGICAL-a406t-9b6acd743a62fa82a86cb54ed99bb89517c7173372b6b4bf85d4cabd658ba5d23</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://pubs.acs.org/doi/pdf/10.1021/es403582f$$EPDF$$P50$$Gacs$$H</linktopdf><linktohtml>$$Uhttps://pubs.acs.org/doi/10.1021/es403582f$$EHTML$$P50$$Gacs$$H</linktohtml><link.rule.ids>314,776,780,2752,27053,27901,27902,56713,56763</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=28344730$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/24392834$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Justicia-Leon, Shandra D</creatorcontrib><creatorcontrib>Higgins, Steven</creatorcontrib><creatorcontrib>Mack, E. Erin</creatorcontrib><creatorcontrib>Griffiths, Daniel R</creatorcontrib><creatorcontrib>Tang, Shuiquan</creatorcontrib><creatorcontrib>Edwards, Elizabeth A</creatorcontrib><creatorcontrib>Löffler, Frank E</creatorcontrib><title>Bioaugmentation with Distinct Dehalobacter Strains Achieves Chloroform Detoxification in Microcosms</title><title>Environmental science & technology</title><addtitle>Environ. Sci. Technol</addtitle><description>Chloroform (CF) is a widespread groundwater contaminant not susceptible to aerobic degradation. Under anoxic conditions, CF can undergo abiotic and cometabolic transformation but detoxification is generally not achieved. The recent discovery of distinct Dehalobacter strains that respire CF to dichloromethane (DCM) and ferment DCM to nonchlorinated products promises that bioremediation of CF plumes is feasible. To track both strains, 16S rRNA gene-based qPCR assays specific for either Dehalobacter strain were designed and validated. A laboratory treatability study explored the value of bioaugmentation and biostimulation to achieve CF detoxification using anoxic microcosms established with aquifer material from a CF-contaminated site. Microcosms that received 6% (v/v) of the CF-to-DCM-dechlorinating culture Dhb-CF to achieve an initial Dehalobacter cell titer of 1.6 ± 0.9 × 104 mL–1 dechlorinated CF to stoichiometric amounts of DCM. Subsequent augmentation with 3% (v/v) of the DCM-degrading consortium RM to an initial Dehalobacter cell abundance of 1.2 ± 0.2 × 102 mL–1 achieved complete DCM degradation in microcosms amended with 10 mM bicarbonate. Growth of the CF-respiring and the DCM-degrading Dehalobacter populations and detoxification were also observed in microcosms that received both inocula simultaneously. These findings suggest that anaerobic bioremediation (e.g., bioaugmentation) is a possible remedy at CF- and DCM-contaminated sites without CT, which strongly inhibited CF organohalide respiration and DCM organohalide fermentation.</description><subject>Applied sciences</subject><subject>Biodegradation of pollutants</subject><subject>Biodegradation, Environmental</subject><subject>Biological and medical sciences</subject><subject>Bioremediation</subject><subject>Biotechnology</subject><subject>Chloroform - metabolism</subject><subject>Decontamination. Miscellaneous</subject><subject>Dehalobacter</subject><subject>Earth sciences</subject><subject>Earth, ocean, space</subject><subject>Engineering and environment geology. 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Economical aspects</subject><subject>Methylene Chloride - metabolism</subject><subject>Microbial Consortia</subject><subject>Natural water pollution</subject><subject>Peptococcaceae - metabolism</subject><subject>Pollution</subject><subject>Pollution, environment geology</subject><subject>RNA, Ribosomal, 16S - chemistry</subject><subject>Soil and sediments pollution</subject><subject>Water flow</subject><subject>Water Pollutants, Chemical - metabolism</subject><subject>Water treatment and pollution</subject><issn>0013-936X</issn><issn>1520-5851</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2014</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqF0ctu1DAUBmALUdFpYcELoEgIqSwCvsdelimXSkUsAIlddOw4jKskbn0cLm_fjGZoEV2w8ubzf87RT8hTRl8xytnrgJIKZXj_gKyY4rRWRrGHZEUpE7UV-tshOUK8pJRyQc0jcsilsNwIuSL-TUwwfx_DVKDENFU_Y9lUZxFLnHypzsIGhuTAl5CrzyVDnLA69ZsYfgSs1psh5dSnPC6wpF-xj36XEqfqY_Q5-YQjPiYHPQwYnuzfY_L13dsv6w_1xaf35-vTixok1aW2ToPvGilA8x4MB6O9UzJ01jpnrGKNb1gjRMOddtL1RnXSg-u0Mg5Ux8UxOdnlXuV0PQcs7RjRh2GAKaQZW6aoWr5bzv5PpbWMWy2ahT7_h16mOU_LIVulG8Ol2c5-uVPL0Yg59O1VjiPk3y2j7bak9rakxT7bJ85uDN2t_NPKAl7sAaCHoc8w-Yh3bjGyEfTOgce_tro38AZN66XD</recordid><startdate>20140204</startdate><enddate>20140204</enddate><creator>Justicia-Leon, Shandra D</creator><creator>Higgins, Steven</creator><creator>Mack, E. 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Erin</au><au>Griffiths, Daniel R</au><au>Tang, Shuiquan</au><au>Edwards, Elizabeth A</au><au>Löffler, Frank E</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Bioaugmentation with Distinct Dehalobacter Strains Achieves Chloroform Detoxification in Microcosms</atitle><jtitle>Environmental science & technology</jtitle><addtitle>Environ. Sci. Technol</addtitle><date>2014-02-04</date><risdate>2014</risdate><volume>48</volume><issue>3</issue><spage>1851</spage><epage>1858</epage><pages>1851-1858</pages><issn>0013-936X</issn><eissn>1520-5851</eissn><coden>ESTHAG</coden><abstract>Chloroform (CF) is a widespread groundwater contaminant not susceptible to aerobic degradation. Under anoxic conditions, CF can undergo abiotic and cometabolic transformation but detoxification is generally not achieved. The recent discovery of distinct Dehalobacter strains that respire CF to dichloromethane (DCM) and ferment DCM to nonchlorinated products promises that bioremediation of CF plumes is feasible. To track both strains, 16S rRNA gene-based qPCR assays specific for either Dehalobacter strain were designed and validated. A laboratory treatability study explored the value of bioaugmentation and biostimulation to achieve CF detoxification using anoxic microcosms established with aquifer material from a CF-contaminated site. Microcosms that received 6% (v/v) of the CF-to-DCM-dechlorinating culture Dhb-CF to achieve an initial Dehalobacter cell titer of 1.6 ± 0.9 × 104 mL–1 dechlorinated CF to stoichiometric amounts of DCM. Subsequent augmentation with 3% (v/v) of the DCM-degrading consortium RM to an initial Dehalobacter cell abundance of 1.2 ± 0.2 × 102 mL–1 achieved complete DCM degradation in microcosms amended with 10 mM bicarbonate. Growth of the CF-respiring and the DCM-degrading Dehalobacter populations and detoxification were also observed in microcosms that received both inocula simultaneously. These findings suggest that anaerobic bioremediation (e.g., bioaugmentation) is a possible remedy at CF- and DCM-contaminated sites without CT, which strongly inhibited CF organohalide respiration and DCM organohalide fermentation.</abstract><cop>Washington, DC</cop><pub>American Chemical Society</pub><pmid>24392834</pmid><doi>10.1021/es403582f</doi><tpages>8</tpages></addata></record> |
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subjects | Applied sciences Biodegradation of pollutants Biodegradation, Environmental Biological and medical sciences Bioremediation Biotechnology Chloroform - metabolism Decontamination. Miscellaneous Dehalobacter Earth sciences Earth, ocean, space Engineering and environment geology. Geothermics Environment and pollution Environmental conditions Exact sciences and technology Feasibility Studies Fermentation Fundamental and applied biological sciences. Psychology Groundwater Groundwaters Halogenation Industrial applications and implications. Economical aspects Methylene Chloride - metabolism Microbial Consortia Natural water pollution Peptococcaceae - metabolism Pollution Pollution, environment geology RNA, Ribosomal, 16S - chemistry Soil and sediments pollution Water flow Water Pollutants, Chemical - metabolism Water treatment and pollution |
title | Bioaugmentation with Distinct Dehalobacter Strains Achieves Chloroform Detoxification in Microcosms |
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