Role of tyrosine‐80 in the stability of kanamycin nucleotidyltransferase analyzed by site‐directed mutagenesis
A thermostable mutant of kanamycin nucleotidyltransferase (KNTase) with a single amino acid replacement of Asp at position 80 by Tyr has been isolated by a novel screening method in a previous study [Matsumura, M. & Aiba, S. (1985) J. Biol. Chem. 260, 15298–15303]. To elucidate the role of Tyr80...
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Veröffentlicht in: | European journal of biochemistry 1988-02, Vol.171 (3), p.715-720 |
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creator | MATSUMURA, Masazumi YAHANDA, Saburo YASUMURA, Shigeyoshi YUTANI, Katsuhide AIBA, Shuichi |
description | A thermostable mutant of kanamycin nucleotidyltransferase (KNTase) with a single amino acid replacement of Asp at position 80 by Tyr has been isolated by a novel screening method in a previous study [Matsumura, M. & Aiba, S. (1985) J. Biol. Chem. 260, 15298–15303]. To elucidate the role of Tyr80 in stabilizing the enzyme, the KNTase gene was modified by site‐directed mutagenesis so that the codon for Asp80 of the wild type was replaced by that for Ser, Thr, Ala, Val, Leu, Phe and Trp, respectively. The eight mutant KNTases including Tyr80 were all purified, as well as the wild‐type enzyme. The heat‐inactivation rate constants were determined at 58°C and the half‐life values were found to be correlated with the hydrophobicity of the amino acid residues replaced at the unique position. The Gibbs energy change of unfolding in water of KNTase assessed from urea denaturation (25 °C, pH 7.0) was also found to be correlated with hydrophobicity. The results suggest that different amino acids at position 80 of KNTase contribute to the stability of the protein by hydrophobic interactions. In the case of tyrosine at position 80 the unusually high stability of the enzyme compared to the Phe80 enzyme suggests that the hydroxyl group also contributes to the conformational stability. |
doi_str_mv | 10.1111/j.1432-1033.1988.tb13844.x |
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(1985) J. Biol. Chem. 260, 15298–15303]. To elucidate the role of Tyr80 in stabilizing the enzyme, the KNTase gene was modified by site‐directed mutagenesis so that the codon for Asp80 of the wild type was replaced by that for Ser, Thr, Ala, Val, Leu, Phe and Trp, respectively. The eight mutant KNTases including Tyr80 were all purified, as well as the wild‐type enzyme. The heat‐inactivation rate constants were determined at 58°C and the half‐life values were found to be correlated with the hydrophobicity of the amino acid residues replaced at the unique position. The Gibbs energy change of unfolding in water of KNTase assessed from urea denaturation (25 °C, pH 7.0) was also found to be correlated with hydrophobicity. The results suggest that different amino acids at position 80 of KNTase contribute to the stability of the protein by hydrophobic interactions. In the case of tyrosine at position 80 the unusually high stability of the enzyme compared to the Phe80 enzyme suggests that the hydroxyl group also contributes to the conformational stability.</description><identifier>ISSN: 0014-2956</identifier><identifier>EISSN: 1432-1033</identifier><identifier>DOI: 10.1111/j.1432-1033.1988.tb13844.x</identifier><identifier>PMID: 2831056</identifier><identifier>CODEN: EJBCAI</identifier><language>eng</language><publisher>Oxford, UK: Blackwell Publishing Ltd</publisher><subject>Analytical, structural and metabolic biochemistry ; Binding Sites ; Biological and medical sciences ; DNA - analysis ; Energy Transfer ; Enzymes and enzyme inhibitors ; Escherichia coli ; Fundamental and applied biological sciences. Psychology ; Hot Temperature ; Hydrogen-Ion Concentration ; Hydroxylation ; Mutation ; Nucleotidyltransferases - genetics ; Nucleotidyltransferases - physiology ; Protein Conformation ; Protein Denaturation ; Transferases ; Tyrosine - isolation & purification ; Tyrosine - physiology ; Urea</subject><ispartof>European journal of biochemistry, 1988-02, Vol.171 (3), p.715-720</ispartof><rights>1988 INIST-CNRS</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c5485-624587b529fc2e51fbfdf377531c3fd5637d9b559e1d045c113099ed8b50b29c3</citedby><cites>FETCH-LOGICAL-c5485-624587b529fc2e51fbfdf377531c3fd5637d9b559e1d045c113099ed8b50b29c3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,27901,27902</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=7675407$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/2831056$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>MATSUMURA, Masazumi</creatorcontrib><creatorcontrib>YAHANDA, Saburo</creatorcontrib><creatorcontrib>YASUMURA, Shigeyoshi</creatorcontrib><creatorcontrib>YUTANI, Katsuhide</creatorcontrib><creatorcontrib>AIBA, Shuichi</creatorcontrib><title>Role of tyrosine‐80 in the stability of kanamycin nucleotidyltransferase analyzed by site‐directed mutagenesis</title><title>European journal of biochemistry</title><addtitle>Eur J Biochem</addtitle><description>A thermostable mutant of kanamycin nucleotidyltransferase (KNTase) with a single amino acid replacement of Asp at position 80 by Tyr has been isolated by a novel screening method in a previous study [Matsumura, M. & Aiba, S. (1985) J. Biol. Chem. 260, 15298–15303]. To elucidate the role of Tyr80 in stabilizing the enzyme, the KNTase gene was modified by site‐directed mutagenesis so that the codon for Asp80 of the wild type was replaced by that for Ser, Thr, Ala, Val, Leu, Phe and Trp, respectively. The eight mutant KNTases including Tyr80 were all purified, as well as the wild‐type enzyme. The heat‐inactivation rate constants were determined at 58°C and the half‐life values were found to be correlated with the hydrophobicity of the amino acid residues replaced at the unique position. The Gibbs energy change of unfolding in water of KNTase assessed from urea denaturation (25 °C, pH 7.0) was also found to be correlated with hydrophobicity. The results suggest that different amino acids at position 80 of KNTase contribute to the stability of the protein by hydrophobic interactions. In the case of tyrosine at position 80 the unusually high stability of the enzyme compared to the Phe80 enzyme suggests that the hydroxyl group also contributes to the conformational stability.</description><subject>Analytical, structural and metabolic biochemistry</subject><subject>Binding Sites</subject><subject>Biological and medical sciences</subject><subject>DNA - analysis</subject><subject>Energy Transfer</subject><subject>Enzymes and enzyme inhibitors</subject><subject>Escherichia coli</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Hot Temperature</subject><subject>Hydrogen-Ion Concentration</subject><subject>Hydroxylation</subject><subject>Mutation</subject><subject>Nucleotidyltransferases - genetics</subject><subject>Nucleotidyltransferases - physiology</subject><subject>Protein Conformation</subject><subject>Protein Denaturation</subject><subject>Transferases</subject><subject>Tyrosine - isolation & purification</subject><subject>Tyrosine - physiology</subject><subject>Urea</subject><issn>0014-2956</issn><issn>1432-1033</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1988</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqVkMtu1TAQhi0EKofCIyBFCLFL8DWJ2aBStbRSpUpc1pbjjMEHJym2IxpWPALPyJPg6ERn39lYmv-bGetD6BXBFcn1dl8RzmhJMGMVkW1bpY6wlvPq_hHaHaPHaIcx4SWVon6KnsW4xxjXsm5O0AltGcGi3qHwafJQTLZIS5iiG-Hfn78tLtxYpO9QxKQ7511aVuKHHvWwmByNs_EwJdcvPgU9RgtBRyhy7pff0BfdUkSX1lW9C2BSbg1z0t9ghOjic_TEah_hxfaeoq-XF1_Or8qb24_X52c3pRG8FWVNuWibTlBpDQVBbGd7y5pGMGKY7UXNml52QkggPebCEMKwlNC3ncAdlYadojeHvXdh-jlDTGpw0YD3eoRpjopwKZigNIPvDqDJCmIAq-6CG3RYFMFqFa72arWqVqtqFa424eo-D7_crszdAP1xdDOc89dbrqPR3mZfxsUj1tSN4LjJ2PsD9st5WB7wAXV58eFzQwT7D5iVoQ4</recordid><startdate>198802</startdate><enddate>198802</enddate><creator>MATSUMURA, Masazumi</creator><creator>YAHANDA, Saburo</creator><creator>YASUMURA, Shigeyoshi</creator><creator>YUTANI, Katsuhide</creator><creator>AIBA, Shuichi</creator><general>Blackwell Publishing Ltd</general><general>Blackwell</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>C1K</scope></search><sort><creationdate>198802</creationdate><title>Role of tyrosine‐80 in the stability of kanamycin nucleotidyltransferase analyzed by site‐directed mutagenesis</title><author>MATSUMURA, Masazumi ; YAHANDA, Saburo ; YASUMURA, Shigeyoshi ; YUTANI, Katsuhide ; AIBA, Shuichi</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c5485-624587b529fc2e51fbfdf377531c3fd5637d9b559e1d045c113099ed8b50b29c3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1988</creationdate><topic>Analytical, structural and metabolic biochemistry</topic><topic>Binding Sites</topic><topic>Biological and medical sciences</topic><topic>DNA - analysis</topic><topic>Energy Transfer</topic><topic>Enzymes and enzyme inhibitors</topic><topic>Escherichia coli</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Hot Temperature</topic><topic>Hydrogen-Ion Concentration</topic><topic>Hydroxylation</topic><topic>Mutation</topic><topic>Nucleotidyltransferases - genetics</topic><topic>Nucleotidyltransferases - physiology</topic><topic>Protein Conformation</topic><topic>Protein Denaturation</topic><topic>Transferases</topic><topic>Tyrosine - isolation & purification</topic><topic>Tyrosine - physiology</topic><topic>Urea</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>MATSUMURA, Masazumi</creatorcontrib><creatorcontrib>YAHANDA, Saburo</creatorcontrib><creatorcontrib>YASUMURA, Shigeyoshi</creatorcontrib><creatorcontrib>YUTANI, Katsuhide</creatorcontrib><creatorcontrib>AIBA, Shuichi</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Environmental Sciences and Pollution Management</collection><jtitle>European journal of biochemistry</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>MATSUMURA, Masazumi</au><au>YAHANDA, Saburo</au><au>YASUMURA, Shigeyoshi</au><au>YUTANI, Katsuhide</au><au>AIBA, Shuichi</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Role of tyrosine‐80 in the stability of kanamycin nucleotidyltransferase analyzed by site‐directed mutagenesis</atitle><jtitle>European journal of biochemistry</jtitle><addtitle>Eur J Biochem</addtitle><date>1988-02</date><risdate>1988</risdate><volume>171</volume><issue>3</issue><spage>715</spage><epage>720</epage><pages>715-720</pages><issn>0014-2956</issn><eissn>1432-1033</eissn><coden>EJBCAI</coden><abstract>A thermostable mutant of kanamycin nucleotidyltransferase (KNTase) with a single amino acid replacement of Asp at position 80 by Tyr has been isolated by a novel screening method in a previous study [Matsumura, M. & Aiba, S. (1985) J. Biol. Chem. 260, 15298–15303]. To elucidate the role of Tyr80 in stabilizing the enzyme, the KNTase gene was modified by site‐directed mutagenesis so that the codon for Asp80 of the wild type was replaced by that for Ser, Thr, Ala, Val, Leu, Phe and Trp, respectively. The eight mutant KNTases including Tyr80 were all purified, as well as the wild‐type enzyme. The heat‐inactivation rate constants were determined at 58°C and the half‐life values were found to be correlated with the hydrophobicity of the amino acid residues replaced at the unique position. The Gibbs energy change of unfolding in water of KNTase assessed from urea denaturation (25 °C, pH 7.0) was also found to be correlated with hydrophobicity. The results suggest that different amino acids at position 80 of KNTase contribute to the stability of the protein by hydrophobic interactions. In the case of tyrosine at position 80 the unusually high stability of the enzyme compared to the Phe80 enzyme suggests that the hydroxyl group also contributes to the conformational stability.</abstract><cop>Oxford, UK</cop><pub>Blackwell Publishing Ltd</pub><pmid>2831056</pmid><doi>10.1111/j.1432-1033.1988.tb13844.x</doi><tpages>6</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Analytical, structural and metabolic biochemistry Binding Sites Biological and medical sciences DNA - analysis Energy Transfer Enzymes and enzyme inhibitors Escherichia coli Fundamental and applied biological sciences. Psychology Hot Temperature Hydrogen-Ion Concentration Hydroxylation Mutation Nucleotidyltransferases - genetics Nucleotidyltransferases - physiology Protein Conformation Protein Denaturation Transferases Tyrosine - isolation & purification Tyrosine - physiology Urea |
title | Role of tyrosine‐80 in the stability of kanamycin nucleotidyltransferase analyzed by site‐directed mutagenesis |
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