Clinical correlations of mutations affecting six components of the SWI/SNF complex: Detailed description of 21 patients and a review of the literature

Mutations in the components of the SWItch/sucrose nonfermentable (SWI/SNF)‐like chromatin remodeling complex have recently been reported to cause Coffin–Siris syndrome (CSS), Nicolaides–Baraitser syndrome (NCBRS), and ARID1B‐related intellectual disability (ID) syndrome. We detail here the genotype‐...

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Veröffentlicht in:American journal of medical genetics. Part A 2013-06, Vol.161A (6), p.1221-1237
Hauptverfasser: Kosho, Tomoki, Okamoto, Nobuhiko, Ohashi, Hirofumi, Tsurusaki, Yoshinori, Imai, Yoko, Hibi-Ko, Yumiko, Kawame, Hiroshi, Homma, Tomomi, Tanabe, Saori, Kato, Mitsuhiro, Hiraki, Yoko, Yamagata, Takanori, Yano, Shoji, Sakazume, Satoru, Ishii, Takuma, Nagai, Toshiro, Ohta, Tohru, Niikawa, Norio, Mizuno, Seiji, Kaname, Tadashi, Naritomi, Kenji, Narumi, Yoko, Wakui, Keiko, Fukushima, Yoshimitsu, Miyatake, Satoko, Mizuguchi, Takeshi, Saitsu, Hirotomo, Miyake, Noriko, Matsumoto, Naomichi
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container_end_page 1237
container_issue 6
container_start_page 1221
container_title American journal of medical genetics. Part A
container_volume 161A
creator Kosho, Tomoki
Okamoto, Nobuhiko
Ohashi, Hirofumi
Tsurusaki, Yoshinori
Imai, Yoko
Hibi-Ko, Yumiko
Kawame, Hiroshi
Homma, Tomomi
Tanabe, Saori
Kato, Mitsuhiro
Hiraki, Yoko
Yamagata, Takanori
Yano, Shoji
Sakazume, Satoru
Ishii, Takuma
Nagai, Toshiro
Ohta, Tohru
Niikawa, Norio
Mizuno, Seiji
Kaname, Tadashi
Naritomi, Kenji
Narumi, Yoko
Wakui, Keiko
Fukushima, Yoshimitsu
Miyatake, Satoko
Mizuguchi, Takeshi
Saitsu, Hirotomo
Miyake, Noriko
Matsumoto, Naomichi
description Mutations in the components of the SWItch/sucrose nonfermentable (SWI/SNF)‐like chromatin remodeling complex have recently been reported to cause Coffin–Siris syndrome (CSS), Nicolaides–Baraitser syndrome (NCBRS), and ARID1B‐related intellectual disability (ID) syndrome. We detail here the genotype‐phenotype correlations for 85 previously published and one additional patient with mutations in the SWI/SNF complex: four with SMARCB1 mutations, seven with SMARCA4 mutations, 37 with SMARCA2 mutations, one with an SMARCE1 mutation, three with ARID1A mutations, and 33 with ARID1B mutations. The mutations were associated with syndromic ID and speech impairment (severe/profound in SMARCB1, SMARCE1, and ARID1A mutations; variable in SMARCA4, SMARCA2, and ARID1B mutations), which was frequently accompanied by agenesis or hypoplasia of the corpus callosum. SMARCB1 mutations caused “classical” CSS with typical facial “coarseness” and significant digital/nail hypoplasia. SMARCA4 mutations caused CSS without typical facial coarseness and with significant digital/nail hypoplasia. SMARCA2 mutations caused NCBRS, typically with short stature, sparse hair, a thin vermillion of the upper lip, an everted lower lip and prominent finger joints. A SMARCE1 mutation caused CSS without typical facial coarseness and with significant digital/nail hypoplasia. ARID1A mutations caused the most severe CSS with severe physical complications. ARID1B mutations caused CSS without typical facial coarseness and with mild digital/nail hypoplasia, or caused syndromic ID. Because of the common underlying mechanism and overlapping clinical features, we propose that these conditions be referred to collectively as “SWI/SNF‐related ID syndromes”. © 2013 Wiley Periodicals, Inc.
doi_str_mv 10.1002/ajmg.a.35933
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We detail here the genotype‐phenotype correlations for 85 previously published and one additional patient with mutations in the SWI/SNF complex: four with SMARCB1 mutations, seven with SMARCA4 mutations, 37 with SMARCA2 mutations, one with an SMARCE1 mutation, three with ARID1A mutations, and 33 with ARID1B mutations. The mutations were associated with syndromic ID and speech impairment (severe/profound in SMARCB1, SMARCE1, and ARID1A mutations; variable in SMARCA4, SMARCA2, and ARID1B mutations), which was frequently accompanied by agenesis or hypoplasia of the corpus callosum. SMARCB1 mutations caused “classical” CSS with typical facial “coarseness” and significant digital/nail hypoplasia. SMARCA4 mutations caused CSS without typical facial coarseness and with significant digital/nail hypoplasia. SMARCA2 mutations caused NCBRS, typically with short stature, sparse hair, a thin vermillion of the upper lip, an everted lower lip and prominent finger joints. A SMARCE1 mutation caused CSS without typical facial coarseness and with significant digital/nail hypoplasia. ARID1A mutations caused the most severe CSS with severe physical complications. ARID1B mutations caused CSS without typical facial coarseness and with mild digital/nail hypoplasia, or caused syndromic ID. 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Part A</title><addtitle>Am. J. Med. Genet</addtitle><description>Mutations in the components of the SWItch/sucrose nonfermentable (SWI/SNF)‐like chromatin remodeling complex have recently been reported to cause Coffin–Siris syndrome (CSS), Nicolaides–Baraitser syndrome (NCBRS), and ARID1B‐related intellectual disability (ID) syndrome. We detail here the genotype‐phenotype correlations for 85 previously published and one additional patient with mutations in the SWI/SNF complex: four with SMARCB1 mutations, seven with SMARCA4 mutations, 37 with SMARCA2 mutations, one with an SMARCE1 mutation, three with ARID1A mutations, and 33 with ARID1B mutations. The mutations were associated with syndromic ID and speech impairment (severe/profound in SMARCB1, SMARCE1, and ARID1A mutations; variable in SMARCA4, SMARCA2, and ARID1B mutations), which was frequently accompanied by agenesis or hypoplasia of the corpus callosum. SMARCB1 mutations caused “classical” CSS with typical facial “coarseness” and significant digital/nail hypoplasia. SMARCA4 mutations caused CSS without typical facial coarseness and with significant digital/nail hypoplasia. SMARCA2 mutations caused NCBRS, typically with short stature, sparse hair, a thin vermillion of the upper lip, an everted lower lip and prominent finger joints. A SMARCE1 mutation caused CSS without typical facial coarseness and with significant digital/nail hypoplasia. ARID1A mutations caused the most severe CSS with severe physical complications. ARID1B mutations caused CSS without typical facial coarseness and with mild digital/nail hypoplasia, or caused syndromic ID. Because of the common underlying mechanism and overlapping clinical features, we propose that these conditions be referred to collectively as “SWI/SNF‐related ID syndromes”. © 2013 Wiley Periodicals, Inc.</description><subject>Abnormalities, Multiple - genetics</subject><subject>ARID1A</subject><subject>ARID1B</subject><subject>Body height</subject><subject>Chromatin Assembly and Disassembly - genetics</subject><subject>Chromosomal Proteins, Non-Histone - genetics</subject><subject>Coffin-Siris syndrome</subject><subject>DNA Helicases - genetics</subject><subject>DNA-Binding Proteins - genetics</subject><subject>Face - abnormalities</subject><subject>Facies</subject><subject>Female</subject><subject>Foot Deformities, Congenital - genetics</subject><subject>Genetic Association Studies</subject><subject>Hand Deformities, Congenital - genetics</subject><subject>Humans</subject><subject>Hypotrichosis - genetics</subject><subject>intellectual disability (ID)</subject><subject>Intellectual Disability - genetics</subject><subject>Male</subject><subject>Micrognathism - genetics</subject><subject>Mutation</subject><subject>Neck - abnormalities</subject><subject>Nicolaides-Baraitser syndrome</subject><subject>Nuclear Proteins - genetics</subject><subject>SMARCA2</subject><subject>SMARCA4</subject><subject>SMARCB1</subject><subject>SMARCB1 Protein</subject><subject>SMARCE1</subject><subject>SWI/SNF complex</subject><subject>Syndrome</subject><subject>Transcription Factors - genetics</subject><issn>1552-4825</issn><issn>1552-4833</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2013</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkUtv1DAURiMEoqWwY40ssWFBpn7GCbtRoEPRtCwKqsTG8jg3xUNe2A6d_hF-L868FixgZVs-35Hu_ZLkJcEzgjE91-v2bqZnTBSMPUpOiRA05Tljj493Kk6SZ96vMWZYyOxpckJZxiSm4jT5XTa2s0Y3yPTOQaOD7TuP-hq1Y9g_dF2DCba7Q95uItcOfQdd2FLhO6Cb28vzm-uL7U8Dm3foPQRtG6hQBd44O0yaCaYEDdG5zequQho5-GXh_iBqbACnw-jgefKk1o2HF_vzLPl68eFL-TFdfl5clvNlagQrWCqlyXiWi9wYCdQIzXEhGKeyokAJy_JqJammRBIsCc81qTjEyRkjIPNVRM-SNzvv4PqfI_igWusNNI3uoB-9IrygGeGYZP9HmRBcFlJM6Ou_0HU_ui4OEoVZjgmOaKTe7ijjeu8d1GpwttXuQRGspmrVVK3SalttxF_tpeOqheoIH7qMAN8B93H3D_-Uqfmnq8X84E13MesDbI4x7X6oTDIp1O31QpWSk3J59U0J9gcsxb3E</recordid><startdate>201306</startdate><enddate>201306</enddate><creator>Kosho, Tomoki</creator><creator>Okamoto, Nobuhiko</creator><creator>Ohashi, Hirofumi</creator><creator>Tsurusaki, Yoshinori</creator><creator>Imai, Yoko</creator><creator>Hibi-Ko, Yumiko</creator><creator>Kawame, Hiroshi</creator><creator>Homma, Tomomi</creator><creator>Tanabe, Saori</creator><creator>Kato, Mitsuhiro</creator><creator>Hiraki, Yoko</creator><creator>Yamagata, Takanori</creator><creator>Yano, Shoji</creator><creator>Sakazume, Satoru</creator><creator>Ishii, Takuma</creator><creator>Nagai, Toshiro</creator><creator>Ohta, Tohru</creator><creator>Niikawa, Norio</creator><creator>Mizuno, Seiji</creator><creator>Kaname, Tadashi</creator><creator>Naritomi, Kenji</creator><creator>Narumi, Yoko</creator><creator>Wakui, Keiko</creator><creator>Fukushima, Yoshimitsu</creator><creator>Miyatake, Satoko</creator><creator>Mizuguchi, Takeshi</creator><creator>Saitsu, Hirotomo</creator><creator>Miyake, Noriko</creator><creator>Matsumoto, Naomichi</creator><general>Blackwell Publishing Ltd</general><general>Wiley Subscription Services, Inc</general><scope>BSCLL</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QP</scope><scope>7TK</scope><scope>8FD</scope><scope>FR3</scope><scope>K9.</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>201306</creationdate><title>Clinical correlations of mutations affecting six components of the SWI/SNF complex: Detailed description of 21 patients and a review of the literature</title><author>Kosho, Tomoki ; 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Part A</jtitle><addtitle>Am. J. Med. Genet</addtitle><date>2013-06</date><risdate>2013</risdate><volume>161A</volume><issue>6</issue><spage>1221</spage><epage>1237</epage><pages>1221-1237</pages><issn>1552-4825</issn><eissn>1552-4833</eissn><abstract>Mutations in the components of the SWItch/sucrose nonfermentable (SWI/SNF)‐like chromatin remodeling complex have recently been reported to cause Coffin–Siris syndrome (CSS), Nicolaides–Baraitser syndrome (NCBRS), and ARID1B‐related intellectual disability (ID) syndrome. We detail here the genotype‐phenotype correlations for 85 previously published and one additional patient with mutations in the SWI/SNF complex: four with SMARCB1 mutations, seven with SMARCA4 mutations, 37 with SMARCA2 mutations, one with an SMARCE1 mutation, three with ARID1A mutations, and 33 with ARID1B mutations. The mutations were associated with syndromic ID and speech impairment (severe/profound in SMARCB1, SMARCE1, and ARID1A mutations; variable in SMARCA4, SMARCA2, and ARID1B mutations), which was frequently accompanied by agenesis or hypoplasia of the corpus callosum. SMARCB1 mutations caused “classical” CSS with typical facial “coarseness” and significant digital/nail hypoplasia. SMARCA4 mutations caused CSS without typical facial coarseness and with significant digital/nail hypoplasia. SMARCA2 mutations caused NCBRS, typically with short stature, sparse hair, a thin vermillion of the upper lip, an everted lower lip and prominent finger joints. A SMARCE1 mutation caused CSS without typical facial coarseness and with significant digital/nail hypoplasia. ARID1A mutations caused the most severe CSS with severe physical complications. ARID1B mutations caused CSS without typical facial coarseness and with mild digital/nail hypoplasia, or caused syndromic ID. Because of the common underlying mechanism and overlapping clinical features, we propose that these conditions be referred to collectively as “SWI/SNF‐related ID syndromes”. © 2013 Wiley Periodicals, Inc.</abstract><cop>United States</cop><pub>Blackwell Publishing Ltd</pub><pmid>23637025</pmid><doi>10.1002/ajmg.a.35933</doi><tpages>17</tpages><oa>free_for_read</oa></addata></record>
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subjects Abnormalities, Multiple - genetics
ARID1A
ARID1B
Body height
Chromatin Assembly and Disassembly - genetics
Chromosomal Proteins, Non-Histone - genetics
Coffin-Siris syndrome
DNA Helicases - genetics
DNA-Binding Proteins - genetics
Face - abnormalities
Facies
Female
Foot Deformities, Congenital - genetics
Genetic Association Studies
Hand Deformities, Congenital - genetics
Humans
Hypotrichosis - genetics
intellectual disability (ID)
Intellectual Disability - genetics
Male
Micrognathism - genetics
Mutation
Neck - abnormalities
Nicolaides-Baraitser syndrome
Nuclear Proteins - genetics
SMARCA2
SMARCA4
SMARCB1
SMARCB1 Protein
SMARCE1
SWI/SNF complex
Syndrome
Transcription Factors - genetics
title Clinical correlations of mutations affecting six components of the SWI/SNF complex: Detailed description of 21 patients and a review of the literature
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