Genetic consequences of historical anthropogenic and ecological events on giant pandas
The giant panda ( Ailuropoda melanoleuca ) was taken to the brink of extinction in the 1980s through a combination of deforestation, large-scale loss of bamboo in the core of its range, poaching, and zoo collection, causing over 1000 deaths from the 1950s. It was thought that the drastic population...
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| Veröffentlicht in: | Ecology (Durham) 2013-10, Vol.94 (10), p.2346-2357 |
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| creator | Zhu, Lifeng Hu, Yibo Qi, Dunwu Wu, Hua Zhan, Xiangjiang Zhang, Shanning Zhang, Baowei Zhang, Lei Zhang, Zhejun Bruford, Michael W Wang, Jinliang Yang, Xuyu Gu, Xiaodong Wei, Fuwen |
| description | The giant panda (
Ailuropoda melanoleuca
) was taken to the brink of extinction in the 1980s through a combination of deforestation, large-scale loss of bamboo in the core of its range, poaching, and zoo collection, causing over 1000 deaths from the 1950s. It was thought that the drastic population decline was likely to impose a severe impact on population viability. Here, based on temporal genotyping of individuals, we show that this rapid decline did not significantly reduce the overall effective population size and genetic variation of this species, or of the two focal populations (Minshan and Qionglai) that declined the most. These results are contrary to previously assumptions, probably because the population decline has not produced the expected negative impact due to the short time scale involved (at most 10 generations), or because previous surveys underestimated the population size at the time of decline. However, if present-day habitat fragmentation and limited migration of giant pandas remains, we predict a loss of genetic diversity across the giant pandas' range in the near future. Thus, our findings highlight the substantial resilience of this species when facing demographic and environmental stochasticity, but key conservation strategies, such as enhancing habitat connectivity and habitat restoration should be immediately implemented to retain the extant genetic variation and maintain long-term evolutionary potential of this endangered species. |
| doi_str_mv | 10.1890/12-1451.1 |
| format | Article |
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Ailuropoda melanoleuca
) was taken to the brink of extinction in the 1980s through a combination of deforestation, large-scale loss of bamboo in the core of its range, poaching, and zoo collection, causing over 1000 deaths from the 1950s. It was thought that the drastic population decline was likely to impose a severe impact on population viability. Here, based on temporal genotyping of individuals, we show that this rapid decline did not significantly reduce the overall effective population size and genetic variation of this species, or of the two focal populations (Minshan and Qionglai) that declined the most. These results are contrary to previously assumptions, probably because the population decline has not produced the expected negative impact due to the short time scale involved (at most 10 generations), or because previous surveys underestimated the population size at the time of decline. However, if present-day habitat fragmentation and limited migration of giant pandas remains, we predict a loss of genetic diversity across the giant pandas' range in the near future. Thus, our findings highlight the substantial resilience of this species when facing demographic and environmental stochasticity, but key conservation strategies, such as enhancing habitat connectivity and habitat restoration should be immediately implemented to retain the extant genetic variation and maintain long-term evolutionary potential of this endangered species.</description><identifier>ISSN: 0012-9658</identifier><identifier>EISSN: 1939-9170</identifier><identifier>DOI: 10.1890/12-1451.1</identifier><identifier>PMID: 24358719</identifier><identifier>CODEN: ECGYAQ</identifier><language>eng</language><publisher>Washington, DC: Ecological Society of America</publisher><subject>Ailuropoda melanoleuca ; Animal and plant ecology ; Animal populations ; Animal, plant and microbial ecology ; Animals ; anthropogenic effects ; Applied ecology ; bamboo flowering ; Bamboos ; Biological and medical sciences ; deforestation ; Demography ; Depopulation ; DNA, Mitochondrial - genetics ; Ecological genetics ; Ecosystem ; effective population size ; endangered species ; Evolutionary genetics ; Exploitation and management of natural biological resources (hunting, fishing and exploited populations survey, etc.) ; extinction ; Fundamental and applied biological sciences. Psychology ; General aspects ; Genetic diversity ; Genetic Variation ; Genetics ; Genotype & phenotype ; genotyping ; giant panda ; habitat conservation ; habitat fragmentation ; habitat loss ; habitats ; Haplotypes ; Human Activities ; Humans ; intraspecific variation ; Mammalia ; Microsatellite Repeats ; Pandas ; poaching ; population decline ; population dynamics ; Population estimates ; Population genetics ; Population size ; surveys ; Time Factors ; Ursidae - genetics ; Ursidae - physiology ; Vertebrates: general zoology, morphology, phylogeny, systematics, cytogenetics, geographical distribution ; viability ; Wildlife conservation ; zoos</subject><ispartof>Ecology (Durham), 2013-10, Vol.94 (10), p.2346-2357</ispartof><rights>Copyright © 2013 Ecological Society of America</rights><rights>2013 by the Ecological Society of America</rights><rights>2014 INIST-CNRS</rights><rights>Copyright Ecological Society of America Oct 2013</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-a5276-1ecbc40818289b6669ad25bc133d5a9d57e78a90eeb30a247d3970fcc53b06d23</citedby><cites>FETCH-LOGICAL-a5276-1ecbc40818289b6669ad25bc133d5a9d57e78a90eeb30a247d3970fcc53b06d23</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.jstor.org/stable/pdf/23597382$$EPDF$$P50$$Gjstor$$H</linktopdf><linktohtml>$$Uhttps://www.jstor.org/stable/23597382$$EHTML$$P50$$Gjstor$$H</linktohtml><link.rule.ids>314,776,780,799,1411,27903,27904,45553,45554,57995,58228</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=27860655$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/24358719$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Zhu, Lifeng</creatorcontrib><creatorcontrib>Hu, Yibo</creatorcontrib><creatorcontrib>Qi, Dunwu</creatorcontrib><creatorcontrib>Wu, Hua</creatorcontrib><creatorcontrib>Zhan, Xiangjiang</creatorcontrib><creatorcontrib>Zhang, Shanning</creatorcontrib><creatorcontrib>Zhang, Baowei</creatorcontrib><creatorcontrib>Zhang, Lei</creatorcontrib><creatorcontrib>Zhang, Zhejun</creatorcontrib><creatorcontrib>Bruford, Michael W</creatorcontrib><creatorcontrib>Wang, Jinliang</creatorcontrib><creatorcontrib>Yang, Xuyu</creatorcontrib><creatorcontrib>Gu, Xiaodong</creatorcontrib><creatorcontrib>Wei, Fuwen</creatorcontrib><title>Genetic consequences of historical anthropogenic and ecological events on giant pandas</title><title>Ecology (Durham)</title><addtitle>Ecology</addtitle><description>The giant panda (
Ailuropoda melanoleuca
) was taken to the brink of extinction in the 1980s through a combination of deforestation, large-scale loss of bamboo in the core of its range, poaching, and zoo collection, causing over 1000 deaths from the 1950s. It was thought that the drastic population decline was likely to impose a severe impact on population viability. Here, based on temporal genotyping of individuals, we show that this rapid decline did not significantly reduce the overall effective population size and genetic variation of this species, or of the two focal populations (Minshan and Qionglai) that declined the most. These results are contrary to previously assumptions, probably because the population decline has not produced the expected negative impact due to the short time scale involved (at most 10 generations), or because previous surveys underestimated the population size at the time of decline. However, if present-day habitat fragmentation and limited migration of giant pandas remains, we predict a loss of genetic diversity across the giant pandas' range in the near future. Thus, our findings highlight the substantial resilience of this species when facing demographic and environmental stochasticity, but key conservation strategies, such as enhancing habitat connectivity and habitat restoration should be immediately implemented to retain the extant genetic variation and maintain long-term evolutionary potential of this endangered species.</description><subject>Ailuropoda melanoleuca</subject><subject>Animal and plant ecology</subject><subject>Animal populations</subject><subject>Animal, plant and microbial ecology</subject><subject>Animals</subject><subject>anthropogenic effects</subject><subject>Applied ecology</subject><subject>bamboo flowering</subject><subject>Bamboos</subject><subject>Biological and medical sciences</subject><subject>deforestation</subject><subject>Demography</subject><subject>Depopulation</subject><subject>DNA, Mitochondrial - genetics</subject><subject>Ecological genetics</subject><subject>Ecosystem</subject><subject>effective population size</subject><subject>endangered species</subject><subject>Evolutionary genetics</subject><subject>Exploitation and management of natural biological resources (hunting, fishing and exploited populations survey, etc.)</subject><subject>extinction</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>General aspects</subject><subject>Genetic diversity</subject><subject>Genetic Variation</subject><subject>Genetics</subject><subject>Genotype & phenotype</subject><subject>genotyping</subject><subject>giant panda</subject><subject>habitat conservation</subject><subject>habitat fragmentation</subject><subject>habitat loss</subject><subject>habitats</subject><subject>Haplotypes</subject><subject>Human Activities</subject><subject>Humans</subject><subject>intraspecific variation</subject><subject>Mammalia</subject><subject>Microsatellite Repeats</subject><subject>Pandas</subject><subject>poaching</subject><subject>population decline</subject><subject>population dynamics</subject><subject>Population estimates</subject><subject>Population genetics</subject><subject>Population size</subject><subject>surveys</subject><subject>Time Factors</subject><subject>Ursidae - genetics</subject><subject>Ursidae - physiology</subject><subject>Vertebrates: general zoology, morphology, phylogeny, systematics, cytogenetics, geographical distribution</subject><subject>viability</subject><subject>Wildlife conservation</subject><subject>zoos</subject><issn>0012-9658</issn><issn>1939-9170</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2013</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp1kktv1DAUhS0EokNhwQ8AIlVIsEjx-7FEo1KQKrGAIrGyHMeZZpSxg52Bzr_nDhk6EireeHG-e-69x0boOcHnRBv8jtCacEHOyQO0IIaZ2hCFH6IFxqAYKfQJelLKGsMhXD9GJ5QzoRUxC_TtMsQw9b7yKZbwYxuiD6VKXXXTlynl3ruhcnG6yWlMqxABdLGtgk9DWv0Rw88QJ6iI1aoHsBpBd-UpetS5oYRnh_sUXX-4-Lr8WF99vvy0fH9VO0GVrEnwjedYE021aaSUxrVUNJ4w1gpnWqGC0s7gEBqGHeWqZUbhznvBGixbyk7Rm9l3zAmGL5Pd9MWHYXAxpG2xhBusmJKcAXr2D7pO2xxhOqCgNaMKa6DezpTPqZQcOjvmfuPyzhJs92FbQu0-bEuAfXlw3Dab0N6Rf9MF4PUBcAWy6rKLvi9HTmmJpRDAyZn71Q9h9_-O9mL5nWLCDCeYMi6h8MVcuN4_1tGYCaOY3sfzatY7l6xbZWh-_QUcJHwEoxnHx1TctBtTtKG4eze9h7qbamw7O91O7DcT1L4q</recordid><startdate>201310</startdate><enddate>201310</enddate><creator>Zhu, Lifeng</creator><creator>Hu, Yibo</creator><creator>Qi, Dunwu</creator><creator>Wu, Hua</creator><creator>Zhan, Xiangjiang</creator><creator>Zhang, Shanning</creator><creator>Zhang, Baowei</creator><creator>Zhang, Lei</creator><creator>Zhang, Zhejun</creator><creator>Bruford, Michael W</creator><creator>Wang, Jinliang</creator><creator>Yang, Xuyu</creator><creator>Gu, Xiaodong</creator><creator>Wei, Fuwen</creator><general>Ecological Society of America</general><general>ECOLOGICAL SOCIETY OF AMERICA</general><scope>FBQ</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QG</scope><scope>7SN</scope><scope>7SS</scope><scope>7ST</scope><scope>7T7</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>K9.</scope><scope>P64</scope><scope>RC3</scope><scope>SOI</scope><scope>7X8</scope></search><sort><creationdate>201310</creationdate><title>Genetic consequences of historical anthropogenic and ecological events on giant pandas</title><author>Zhu, Lifeng ; Hu, Yibo ; Qi, Dunwu ; Wu, Hua ; Zhan, Xiangjiang ; Zhang, Shanning ; Zhang, Baowei ; Zhang, Lei ; Zhang, Zhejun ; Bruford, Michael W ; Wang, Jinliang ; Yang, Xuyu ; Gu, Xiaodong ; Wei, Fuwen</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-a5276-1ecbc40818289b6669ad25bc133d5a9d57e78a90eeb30a247d3970fcc53b06d23</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2013</creationdate><topic>Ailuropoda melanoleuca</topic><topic>Animal and plant ecology</topic><topic>Animal populations</topic><topic>Animal, plant and microbial ecology</topic><topic>Animals</topic><topic>anthropogenic effects</topic><topic>Applied ecology</topic><topic>bamboo flowering</topic><topic>Bamboos</topic><topic>Biological and medical sciences</topic><topic>deforestation</topic><topic>Demography</topic><topic>Depopulation</topic><topic>DNA, Mitochondrial - genetics</topic><topic>Ecological genetics</topic><topic>Ecosystem</topic><topic>effective population size</topic><topic>endangered species</topic><topic>Evolutionary genetics</topic><topic>Exploitation and management of natural biological resources (hunting, fishing and exploited populations survey, etc.)</topic><topic>extinction</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>General aspects</topic><topic>Genetic diversity</topic><topic>Genetic Variation</topic><topic>Genetics</topic><topic>Genotype & phenotype</topic><topic>genotyping</topic><topic>giant panda</topic><topic>habitat conservation</topic><topic>habitat fragmentation</topic><topic>habitat loss</topic><topic>habitats</topic><topic>Haplotypes</topic><topic>Human Activities</topic><topic>Humans</topic><topic>intraspecific variation</topic><topic>Mammalia</topic><topic>Microsatellite Repeats</topic><topic>Pandas</topic><topic>poaching</topic><topic>population decline</topic><topic>population dynamics</topic><topic>Population estimates</topic><topic>Population genetics</topic><topic>Population size</topic><topic>surveys</topic><topic>Time Factors</topic><topic>Ursidae - genetics</topic><topic>Ursidae - physiology</topic><topic>Vertebrates: general zoology, morphology, phylogeny, systematics, cytogenetics, geographical distribution</topic><topic>viability</topic><topic>Wildlife conservation</topic><topic>zoos</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Zhu, Lifeng</creatorcontrib><creatorcontrib>Hu, Yibo</creatorcontrib><creatorcontrib>Qi, Dunwu</creatorcontrib><creatorcontrib>Wu, Hua</creatorcontrib><creatorcontrib>Zhan, Xiangjiang</creatorcontrib><creatorcontrib>Zhang, Shanning</creatorcontrib><creatorcontrib>Zhang, Baowei</creatorcontrib><creatorcontrib>Zhang, Lei</creatorcontrib><creatorcontrib>Zhang, Zhejun</creatorcontrib><creatorcontrib>Bruford, Michael W</creatorcontrib><creatorcontrib>Wang, Jinliang</creatorcontrib><creatorcontrib>Yang, Xuyu</creatorcontrib><creatorcontrib>Gu, Xiaodong</creatorcontrib><creatorcontrib>Wei, Fuwen</creatorcontrib><collection>AGRIS</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Animal Behavior Abstracts</collection><collection>Ecology Abstracts</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Environment Abstracts</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>Environment Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Ecology (Durham)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Zhu, Lifeng</au><au>Hu, Yibo</au><au>Qi, Dunwu</au><au>Wu, Hua</au><au>Zhan, Xiangjiang</au><au>Zhang, Shanning</au><au>Zhang, Baowei</au><au>Zhang, Lei</au><au>Zhang, Zhejun</au><au>Bruford, Michael W</au><au>Wang, Jinliang</au><au>Yang, Xuyu</au><au>Gu, Xiaodong</au><au>Wei, Fuwen</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Genetic consequences of historical anthropogenic and ecological events on giant pandas</atitle><jtitle>Ecology (Durham)</jtitle><addtitle>Ecology</addtitle><date>2013-10</date><risdate>2013</risdate><volume>94</volume><issue>10</issue><spage>2346</spage><epage>2357</epage><pages>2346-2357</pages><issn>0012-9658</issn><eissn>1939-9170</eissn><coden>ECGYAQ</coden><abstract>The giant panda (
Ailuropoda melanoleuca
) was taken to the brink of extinction in the 1980s through a combination of deforestation, large-scale loss of bamboo in the core of its range, poaching, and zoo collection, causing over 1000 deaths from the 1950s. It was thought that the drastic population decline was likely to impose a severe impact on population viability. Here, based on temporal genotyping of individuals, we show that this rapid decline did not significantly reduce the overall effective population size and genetic variation of this species, or of the two focal populations (Minshan and Qionglai) that declined the most. These results are contrary to previously assumptions, probably because the population decline has not produced the expected negative impact due to the short time scale involved (at most 10 generations), or because previous surveys underestimated the population size at the time of decline. However, if present-day habitat fragmentation and limited migration of giant pandas remains, we predict a loss of genetic diversity across the giant pandas' range in the near future. Thus, our findings highlight the substantial resilience of this species when facing demographic and environmental stochasticity, but key conservation strategies, such as enhancing habitat connectivity and habitat restoration should be immediately implemented to retain the extant genetic variation and maintain long-term evolutionary potential of this endangered species.</abstract><cop>Washington, DC</cop><pub>Ecological Society of America</pub><pmid>24358719</pmid><doi>10.1890/12-1451.1</doi><tpages>12</tpages><oa>free_for_read</oa></addata></record> |
| fulltext | fulltext |
| identifier | ISSN: 0012-9658 |
| ispartof | Ecology (Durham), 2013-10, Vol.94 (10), p.2346-2357 |
| issn | 0012-9658 1939-9170 |
| language | eng |
| recordid | cdi_proquest_miscellaneous_1490737643 |
| source | Jstor Complete Legacy; Wiley Online Library - AutoHoldings Journals; MEDLINE |
| subjects | Ailuropoda melanoleuca Animal and plant ecology Animal populations Animal, plant and microbial ecology Animals anthropogenic effects Applied ecology bamboo flowering Bamboos Biological and medical sciences deforestation Demography Depopulation DNA, Mitochondrial - genetics Ecological genetics Ecosystem effective population size endangered species Evolutionary genetics Exploitation and management of natural biological resources (hunting, fishing and exploited populations survey, etc.) extinction Fundamental and applied biological sciences. Psychology General aspects Genetic diversity Genetic Variation Genetics Genotype & phenotype genotyping giant panda habitat conservation habitat fragmentation habitat loss habitats Haplotypes Human Activities Humans intraspecific variation Mammalia Microsatellite Repeats Pandas poaching population decline population dynamics Population estimates Population genetics Population size surveys Time Factors Ursidae - genetics Ursidae - physiology Vertebrates: general zoology, morphology, phylogeny, systematics, cytogenetics, geographical distribution viability Wildlife conservation zoos |
| title | Genetic consequences of historical anthropogenic and ecological events on giant pandas |
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