Breast density quantification using magnetic resonance imaging (MRI) with bias field correction: A postmortem study

Purpose: Quantification of breast density based on three-dimensional breast MRI may provide useful information for the early detection of breast cancer. However, the field inhomogeneity can severely challenge the computerized image segmentation process. In this work, the effect of the bias field in...

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Veröffentlicht in:Medical physics (Lancaster) 2013-12, Vol.40 (12), p.122305-n/a
Hauptverfasser: Ding, Huanjun, Johnson, Travis, Lin, Muqing, Le, Huy Q., Ducote, Justin L., Su, Min-Ying, Molloi, Sabee
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container_issue 12
container_start_page 122305
container_title Medical physics (Lancaster)
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creator Ding, Huanjun
Johnson, Travis
Lin, Muqing
Le, Huy Q.
Ducote, Justin L.
Su, Min-Ying
Molloi, Sabee
description Purpose: Quantification of breast density based on three-dimensional breast MRI may provide useful information for the early detection of breast cancer. However, the field inhomogeneity can severely challenge the computerized image segmentation process. In this work, the effect of the bias field in breast density quantification has been investigated with a postmortem study. Methods: T1-weighted images of 20 pairs of postmortem breasts were acquired on a 1.5 T breast MRI scanner. Two computer-assisted algorithms were used to quantify the volumetric breast density. First, standard fuzzy c-means (FCM) clustering was used on raw images with the bias field present. Then, the coherent local intensity clustering (CLIC) method estimated and corrected the bias field during the iterative tissue segmentation process. Finally, FCM clustering was performed on the bias-field-corrected images produced by CLIC method. The left–right correlation for breasts in the same pair was studied for both segmentation algorithms to evaluate the precision of the tissue classification. Finally, the breast densities measured with the three methods were compared to the gold standard tissue compositions obtained from chemical analysis. The linear correlation coefficient, Pearson'sr, was used to evaluate the two image segmentation algorithms and the effect of bias field. Results: The CLIC method successfully corrected the intensity inhomogeneity induced by the bias field. In left–right comparisons, the CLIC method significantly improved the slope and the correlation coefficient of the linear fitting for the glandular volume estimation. The left–right breast density correlation was also increased from 0.93 to 0.98. When compared with the percent fibroglandular volume (%FGV) from chemical analysis, results after bias field correction from both the CLIC the FCM algorithms showed improved linear correlation. As a result, the Pearson'sr increased from 0.86 to 0.92 with the bias field correction. Conclusions: The investigated CLIC method significantly increased the precision and accuracy of breast density quantification using breast MRI images by effectively correcting the bias field. It is expected that a fully automated computerized algorithm for breast density quantification may have great potential in clinical MRI applications.
doi_str_mv 10.1118/1.4831967
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However, the field inhomogeneity can severely challenge the computerized image segmentation process. In this work, the effect of the bias field in breast density quantification has been investigated with a postmortem study. Methods: T1-weighted images of 20 pairs of postmortem breasts were acquired on a 1.5 T breast MRI scanner. Two computer-assisted algorithms were used to quantify the volumetric breast density. First, standard fuzzy c-means (FCM) clustering was used on raw images with the bias field present. Then, the coherent local intensity clustering (CLIC) method estimated and corrected the bias field during the iterative tissue segmentation process. Finally, FCM clustering was performed on the bias-field-corrected images produced by CLIC method. The left–right correlation for breasts in the same pair was studied for both segmentation algorithms to evaluate the precision of the tissue classification. Finally, the breast densities measured with the three methods were compared to the gold standard tissue compositions obtained from chemical analysis. The linear correlation coefficient, Pearson'sr, was used to evaluate the two image segmentation algorithms and the effect of bias field. Results: The CLIC method successfully corrected the intensity inhomogeneity induced by the bias field. In left–right comparisons, the CLIC method significantly improved the slope and the correlation coefficient of the linear fitting for the glandular volume estimation. The left–right breast density correlation was also increased from 0.93 to 0.98. When compared with the percent fibroglandular volume (%FGV) from chemical analysis, results after bias field correction from both the CLIC the FCM algorithms showed improved linear correlation. As a result, the Pearson'sr increased from 0.86 to 0.92 with the bias field correction. Conclusions: The investigated CLIC method significantly increased the precision and accuracy of breast density quantification using breast MRI images by effectively correcting the bias field. It is expected that a fully automated computerized algorithm for breast density quantification may have great potential in clinical MRI applications.</description><identifier>ISSN: 0094-2405</identifier><identifier>EISSN: 2473-4209</identifier><identifier>EISSN: 0094-2405</identifier><identifier>DOI: 10.1118/1.4831967</identifier><identifier>PMID: 24320536</identifier><identifier>CODEN: MPHYA6</identifier><language>eng</language><publisher>United States: American Association of Physicists in Medicine</publisher><subject>ACCURACY ; ALGORITHMS ; ANIMAL TISSUES ; Autopsy ; Biological material, e.g. blood, urine; Haemocytometers ; biological tissues ; biomedical MRI ; Breast - pathology ; breast density ; breast imaging ; CHEMICAL ANALYSIS ; Cluster analysis ; CORRECTIONS ; CORRELATIONS ; density measurement ; Digital computing or data processing equipment or methods, specially adapted for specific applications ; Female ; fuzzy c‐means clustering ; FUZZY LOGIC ; Humans ; image classification ; Image data processing or generation, in general ; Image Processing, Computer-Assisted - methods ; image segmentation ; Investigating density or specific gravity of materials; Analysing materials by determining density or specific gravity ; Involving electronic [emr] or nuclear [nmr] magnetic resonance, e.g. magnetic resonance imaging ; ITERATIVE METHODS ; Lipids ; Magnetic resonance imaging ; Magnetic Resonance Imaging - methods ; Magnetic Resonance Physics ; MAMMARY GLANDS ; Mammography ; Mass and density ; medical image processing ; Medical image segmentation ; MRI ; NEOPLASMS ; NMR IMAGING ; Organ Size ; Proteins ; RADIOLOGY AND NUCLEAR MEDICINE ; Segmentation ; statistical analysis ; Tissues</subject><ispartof>Medical physics (Lancaster), 2013-12, Vol.40 (12), p.122305-n/a</ispartof><rights>American Association of Physicists in Medicine</rights><rights>2013 American Association of Physicists in Medicine</rights><rights>Copyright © 2013 American Association of Physicists in Medicine 2013 American Association of Physicists in Medicine</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c5117-8f4c07f46e0a834f0b9d12f04f86f06cdc3dba0223743bc128b7ebcc1f0e31783</citedby><cites>FETCH-LOGICAL-c5117-8f4c07f46e0a834f0b9d12f04f86f06cdc3dba0223743bc128b7ebcc1f0e31783</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1118%2F1.4831967$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1118%2F1.4831967$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>230,314,780,784,885,1417,27924,27925,45574,45575</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/24320536$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink><backlink>$$Uhttps://www.osti.gov/biblio/22251794$$D View this record in Osti.gov$$Hfree_for_read</backlink></links><search><creatorcontrib>Ding, Huanjun</creatorcontrib><creatorcontrib>Johnson, Travis</creatorcontrib><creatorcontrib>Lin, Muqing</creatorcontrib><creatorcontrib>Le, Huy Q.</creatorcontrib><creatorcontrib>Ducote, Justin L.</creatorcontrib><creatorcontrib>Su, Min-Ying</creatorcontrib><creatorcontrib>Molloi, Sabee</creatorcontrib><title>Breast density quantification using magnetic resonance imaging (MRI) with bias field correction: A postmortem study</title><title>Medical physics (Lancaster)</title><addtitle>Med Phys</addtitle><description>Purpose: Quantification of breast density based on three-dimensional breast MRI may provide useful information for the early detection of breast cancer. However, the field inhomogeneity can severely challenge the computerized image segmentation process. In this work, the effect of the bias field in breast density quantification has been investigated with a postmortem study. Methods: T1-weighted images of 20 pairs of postmortem breasts were acquired on a 1.5 T breast MRI scanner. Two computer-assisted algorithms were used to quantify the volumetric breast density. First, standard fuzzy c-means (FCM) clustering was used on raw images with the bias field present. Then, the coherent local intensity clustering (CLIC) method estimated and corrected the bias field during the iterative tissue segmentation process. Finally, FCM clustering was performed on the bias-field-corrected images produced by CLIC method. The left–right correlation for breasts in the same pair was studied for both segmentation algorithms to evaluate the precision of the tissue classification. Finally, the breast densities measured with the three methods were compared to the gold standard tissue compositions obtained from chemical analysis. The linear correlation coefficient, Pearson'sr, was used to evaluate the two image segmentation algorithms and the effect of bias field. Results: The CLIC method successfully corrected the intensity inhomogeneity induced by the bias field. In left–right comparisons, the CLIC method significantly improved the slope and the correlation coefficient of the linear fitting for the glandular volume estimation. The left–right breast density correlation was also increased from 0.93 to 0.98. When compared with the percent fibroglandular volume (%FGV) from chemical analysis, results after bias field correction from both the CLIC the FCM algorithms showed improved linear correlation. As a result, the Pearson'sr increased from 0.86 to 0.92 with the bias field correction. Conclusions: The investigated CLIC method significantly increased the precision and accuracy of breast density quantification using breast MRI images by effectively correcting the bias field. 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Analysing materials by determining density or specific gravity</subject><subject>Involving electronic [emr] or nuclear [nmr] magnetic resonance, e.g. magnetic resonance imaging</subject><subject>ITERATIVE METHODS</subject><subject>Lipids</subject><subject>Magnetic resonance imaging</subject><subject>Magnetic Resonance Imaging - methods</subject><subject>Magnetic Resonance Physics</subject><subject>MAMMARY GLANDS</subject><subject>Mammography</subject><subject>Mass and density</subject><subject>medical image processing</subject><subject>Medical image segmentation</subject><subject>MRI</subject><subject>NEOPLASMS</subject><subject>NMR IMAGING</subject><subject>Organ Size</subject><subject>Proteins</subject><subject>RADIOLOGY AND NUCLEAR MEDICINE</subject><subject>Segmentation</subject><subject>statistical analysis</subject><subject>Tissues</subject><issn>0094-2405</issn><issn>2473-4209</issn><issn>0094-2405</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2013</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp9kV1rFDEUhoModq1e-Ack4E0rTD35mI_1QqjFj0KLInodMpmT3chMsk0yLfvvnXXWpSJ6Fch58uQ9vIQ8Z3DGGGteszPZCLas6gdkwWUtCslh-ZAsAJay4BLKI_IkpR8AUIkSHpMjLgWHUlQLkt5F1CnTDn1yeUtvRu2zs87o7IKnY3J-RQe98pidoRFT8NobpG66241Orr9entI7l9e0dTpR67DvqAkxotkZ3tBzugkpDyFmHGjKY7d9Sh5Z3Sd8tj-PyfcP779dfCquPn-8vDi_KkzJWF00VhqorawQdCOkhXbZMW5B2qayUJnOiK7VwLmopWgN401bY2sMs4CC1Y04Jm9n72ZsB-wM-hx1rzZxCh-3Kmin_px4t1arcKtEU_EKYBK8nAXTAk4l4zKatQneT7spznnJ6qWcqJP9NzHcjJiyGlwy2PfaYxiTYrKqoWqgZBN6OqMmhpQi2kMYBmpXpWJqX-XEvrif_kD-7m4Cihm4cz1u_21S11_2wlczv1vkV72HN7ch3uM3nf0f_HfUn-d0xHc</recordid><startdate>201312</startdate><enddate>201312</enddate><creator>Ding, Huanjun</creator><creator>Johnson, Travis</creator><creator>Lin, Muqing</creator><creator>Le, Huy Q.</creator><creator>Ducote, Justin L.</creator><creator>Su, Min-Ying</creator><creator>Molloi, Sabee</creator><general>American Association of Physicists in Medicine</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>OTOTI</scope><scope>5PM</scope></search><sort><creationdate>201312</creationdate><title>Breast density quantification using magnetic resonance imaging (MRI) with bias field correction: A postmortem study</title><author>Ding, Huanjun ; Johnson, Travis ; Lin, Muqing ; Le, Huy Q. ; Ducote, Justin L. ; Su, Min-Ying ; Molloi, Sabee</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c5117-8f4c07f46e0a834f0b9d12f04f86f06cdc3dba0223743bc128b7ebcc1f0e31783</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2013</creationdate><topic>ACCURACY</topic><topic>ALGORITHMS</topic><topic>ANIMAL TISSUES</topic><topic>Autopsy</topic><topic>Biological material, e.g. blood, urine; Haemocytometers</topic><topic>biological tissues</topic><topic>biomedical MRI</topic><topic>Breast - pathology</topic><topic>breast density</topic><topic>breast imaging</topic><topic>CHEMICAL ANALYSIS</topic><topic>Cluster analysis</topic><topic>CORRECTIONS</topic><topic>CORRELATIONS</topic><topic>density measurement</topic><topic>Digital computing or data processing equipment or methods, specially adapted for specific applications</topic><topic>Female</topic><topic>fuzzy c‐means clustering</topic><topic>FUZZY LOGIC</topic><topic>Humans</topic><topic>image classification</topic><topic>Image data processing or generation, in general</topic><topic>Image Processing, Computer-Assisted - methods</topic><topic>image segmentation</topic><topic>Investigating density or specific gravity of materials; Analysing materials by determining density or specific gravity</topic><topic>Involving electronic [emr] or nuclear [nmr] magnetic resonance, e.g. magnetic resonance imaging</topic><topic>ITERATIVE METHODS</topic><topic>Lipids</topic><topic>Magnetic resonance imaging</topic><topic>Magnetic Resonance Imaging - methods</topic><topic>Magnetic Resonance Physics</topic><topic>MAMMARY GLANDS</topic><topic>Mammography</topic><topic>Mass and density</topic><topic>medical image processing</topic><topic>Medical image segmentation</topic><topic>MRI</topic><topic>NEOPLASMS</topic><topic>NMR IMAGING</topic><topic>Organ Size</topic><topic>Proteins</topic><topic>RADIOLOGY AND NUCLEAR MEDICINE</topic><topic>Segmentation</topic><topic>statistical analysis</topic><topic>Tissues</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Ding, Huanjun</creatorcontrib><creatorcontrib>Johnson, Travis</creatorcontrib><creatorcontrib>Lin, Muqing</creatorcontrib><creatorcontrib>Le, Huy Q.</creatorcontrib><creatorcontrib>Ducote, Justin L.</creatorcontrib><creatorcontrib>Su, Min-Ying</creatorcontrib><creatorcontrib>Molloi, Sabee</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>OSTI.GOV</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Medical physics (Lancaster)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Ding, Huanjun</au><au>Johnson, Travis</au><au>Lin, Muqing</au><au>Le, Huy Q.</au><au>Ducote, Justin L.</au><au>Su, Min-Ying</au><au>Molloi, Sabee</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Breast density quantification using magnetic resonance imaging (MRI) with bias field correction: A postmortem study</atitle><jtitle>Medical physics (Lancaster)</jtitle><addtitle>Med Phys</addtitle><date>2013-12</date><risdate>2013</risdate><volume>40</volume><issue>12</issue><spage>122305</spage><epage>n/a</epage><pages>122305-n/a</pages><issn>0094-2405</issn><eissn>2473-4209</eissn><eissn>0094-2405</eissn><coden>MPHYA6</coden><abstract>Purpose: Quantification of breast density based on three-dimensional breast MRI may provide useful information for the early detection of breast cancer. However, the field inhomogeneity can severely challenge the computerized image segmentation process. In this work, the effect of the bias field in breast density quantification has been investigated with a postmortem study. Methods: T1-weighted images of 20 pairs of postmortem breasts were acquired on a 1.5 T breast MRI scanner. Two computer-assisted algorithms were used to quantify the volumetric breast density. First, standard fuzzy c-means (FCM) clustering was used on raw images with the bias field present. Then, the coherent local intensity clustering (CLIC) method estimated and corrected the bias field during the iterative tissue segmentation process. Finally, FCM clustering was performed on the bias-field-corrected images produced by CLIC method. The left–right correlation for breasts in the same pair was studied for both segmentation algorithms to evaluate the precision of the tissue classification. Finally, the breast densities measured with the three methods were compared to the gold standard tissue compositions obtained from chemical analysis. The linear correlation coefficient, Pearson'sr, was used to evaluate the two image segmentation algorithms and the effect of bias field. Results: The CLIC method successfully corrected the intensity inhomogeneity induced by the bias field. In left–right comparisons, the CLIC method significantly improved the slope and the correlation coefficient of the linear fitting for the glandular volume estimation. The left–right breast density correlation was also increased from 0.93 to 0.98. When compared with the percent fibroglandular volume (%FGV) from chemical analysis, results after bias field correction from both the CLIC the FCM algorithms showed improved linear correlation. As a result, the Pearson'sr increased from 0.86 to 0.92 with the bias field correction. Conclusions: The investigated CLIC method significantly increased the precision and accuracy of breast density quantification using breast MRI images by effectively correcting the bias field. It is expected that a fully automated computerized algorithm for breast density quantification may have great potential in clinical MRI applications.</abstract><cop>United States</cop><pub>American Association of Physicists in Medicine</pub><pmid>24320536</pmid><doi>10.1118/1.4831967</doi><tpages>11</tpages><oa>free_for_read</oa></addata></record>
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subjects ACCURACY
ALGORITHMS
ANIMAL TISSUES
Autopsy
Biological material, e.g. blood, urine
Haemocytometers
biological tissues
biomedical MRI
Breast - pathology
breast density
breast imaging
CHEMICAL ANALYSIS
Cluster analysis
CORRECTIONS
CORRELATIONS
density measurement
Digital computing or data processing equipment or methods, specially adapted for specific applications
Female
fuzzy c‐means clustering
FUZZY LOGIC
Humans
image classification
Image data processing or generation, in general
Image Processing, Computer-Assisted - methods
image segmentation
Investigating density or specific gravity of materials
Analysing materials by determining density or specific gravity
Involving electronic [emr] or nuclear [nmr] magnetic resonance, e.g. magnetic resonance imaging
ITERATIVE METHODS
Lipids
Magnetic resonance imaging
Magnetic Resonance Imaging - methods
Magnetic Resonance Physics
MAMMARY GLANDS
Mammography
Mass and density
medical image processing
Medical image segmentation
MRI
NEOPLASMS
NMR IMAGING
Organ Size
Proteins
RADIOLOGY AND NUCLEAR MEDICINE
Segmentation
statistical analysis
Tissues
title Breast density quantification using magnetic resonance imaging (MRI) with bias field correction: A postmortem study
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