Amendment of degraded desert soil with wastewater debris containing immobilized Chlorella sorokiniana and Azospirillum brasilense significantly modifies soil bacterial community structure, diversity, and richness
The main goal of this study was to expand our knowledge of what happens to the soil bacterial community in an eroded desert soil when improvement of soil fertility is derived from the application of debris of tertiary wastewater treatment containing immobilized microalgae Chlorella sorokiniana and t...
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| Veröffentlicht in: | Biology and fertility of soils 2013-11, Vol.49 (8), p.1053-1063 |
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| creator | Lopez, Blanca R. Bashan, Yoav Trejo, Adan de-Bashan, Luz E. |
| description | The main goal of this study was to expand our knowledge of what happens to the soil bacterial community in an eroded desert soil when improvement of soil fertility is derived from the application of debris of tertiary wastewater treatment containing immobilized microalgae
Chlorella sorokiniana
and the plant growth-promoting bacterium (PGPB)
Azospirillum brasilense
. We hypothesized that an “improved” non-agricultural desert soil will exhibit substantial changes in the structure of the bacterial community in a relatively short time after amendment. To assess the effect of the amendments, microalgae and PGPB alone or combined, on the structure of the rhizosphere bacterial community, changes in species richness and bacterial diversity over time were based on sequence differences in the 16S rRNA gene, performed with PCR–denaturing gradient gel electrophoresis (DGGE) and then analyzed by similarity test and non-metric multidimensional scaling analysis. Root surface colonization and persistence in the rhizosphere of
A
.
brasilense
was monitored by fluorescent in situ hybridization and sequencing of DGGE bands. Application of waste debris significantly changed the rhizosphere bacterial population structure, whether comparisons were made over time, between inoculated and non-inoculated soil, and among different inoculated microorganisms. Species richness and diversity increased when the waste debris contained the microalgae–bacteria association and also over time. Even as its secondary role as an inoculant after wastewater treatment,
A
.
brasilense
colonized the root surface profusely and persisted within the rhizosphere bacterial community. This study demonstrated that small organic amendment to desert soil significantly changed soil bacterial community compared to the original soil and also 2 months after amendments were added. |
| doi_str_mv | 10.1007/s00374-013-0799-1 |
| format | Article |
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Chlorella sorokiniana
and the plant growth-promoting bacterium (PGPB)
Azospirillum brasilense
. We hypothesized that an “improved” non-agricultural desert soil will exhibit substantial changes in the structure of the bacterial community in a relatively short time after amendment. To assess the effect of the amendments, microalgae and PGPB alone or combined, on the structure of the rhizosphere bacterial community, changes in species richness and bacterial diversity over time were based on sequence differences in the 16S rRNA gene, performed with PCR–denaturing gradient gel electrophoresis (DGGE) and then analyzed by similarity test and non-metric multidimensional scaling analysis. Root surface colonization and persistence in the rhizosphere of
A
.
brasilense
was monitored by fluorescent in situ hybridization and sequencing of DGGE bands. Application of waste debris significantly changed the rhizosphere bacterial population structure, whether comparisons were made over time, between inoculated and non-inoculated soil, and among different inoculated microorganisms. Species richness and diversity increased when the waste debris contained the microalgae–bacteria association and also over time. Even as its secondary role as an inoculant after wastewater treatment,
A
.
brasilense
colonized the root surface profusely and persisted within the rhizosphere bacterial community. This study demonstrated that small organic amendment to desert soil significantly changed soil bacterial community compared to the original soil and also 2 months after amendments were added.</description><identifier>ISSN: 0178-2762</identifier><identifier>EISSN: 1432-0789</identifier><identifier>DOI: 10.1007/s00374-013-0799-1</identifier><identifier>CODEN: BFSOEE</identifier><language>eng</language><publisher>Berlin/Heidelberg: Springer Berlin Heidelberg</publisher><subject>Agriculture ; Agronomy. Soil science and plant productions ; Azospirillum brasilense ; Bacteria ; Biochemistry and biology ; Biological and medical sciences ; Biomedical and Life Sciences ; Chemical, physicochemical, biochemical and biological properties ; Chlorella sorokiniana ; Community ecology ; Community structure ; Desert soils ; Deserts ; Detritus ; Fundamental and applied biological sciences. Psychology ; General agronomy. Plant production ; Life Sciences ; Microalgae ; Microbiology ; Microorganisms ; Original Paper ; Other nutrients. Amendments. Solid and liquid wastes. Sludges and slurries ; Physics, chemistry, biochemistry and biology of agricultural and forest soils ; Plant growth ; Population structure ; Rhizosphere ; Soil conditioners ; Soil fertility ; Soil microorganisms ; Soil science ; Soil Science & Conservation ; Soil-plant relationships. Soil fertility. Fertilization. Amendments ; Soils ; Species diversity ; Species richness ; Tertiary wastewater treatment</subject><ispartof>Biology and fertility of soils, 2013-11, Vol.49 (8), p.1053-1063</ispartof><rights>Springer-Verlag Berlin Heidelberg 2013</rights><rights>2014 INIST-CNRS</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c379t-a2eb4cb7d23e81f6c8fd002377bf26b96b8bc1ee5ed784c4a4a6c9edf0180e053</citedby><cites>FETCH-LOGICAL-c379t-a2eb4cb7d23e81f6c8fd002377bf26b96b8bc1ee5ed784c4a4a6c9edf0180e053</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s00374-013-0799-1$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s00374-013-0799-1$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,777,781,27906,27907,41470,42539,51301</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=27906563$$DView record in Pascal Francis$$Hfree_for_read</backlink></links><search><creatorcontrib>Lopez, Blanca R.</creatorcontrib><creatorcontrib>Bashan, Yoav</creatorcontrib><creatorcontrib>Trejo, Adan</creatorcontrib><creatorcontrib>de-Bashan, Luz E.</creatorcontrib><title>Amendment of degraded desert soil with wastewater debris containing immobilized Chlorella sorokiniana and Azospirillum brasilense significantly modifies soil bacterial community structure, diversity, and richness</title><title>Biology and fertility of soils</title><addtitle>Biol Fertil Soils</addtitle><description>The main goal of this study was to expand our knowledge of what happens to the soil bacterial community in an eroded desert soil when improvement of soil fertility is derived from the application of debris of tertiary wastewater treatment containing immobilized microalgae
Chlorella sorokiniana
and the plant growth-promoting bacterium (PGPB)
Azospirillum brasilense
. We hypothesized that an “improved” non-agricultural desert soil will exhibit substantial changes in the structure of the bacterial community in a relatively short time after amendment. To assess the effect of the amendments, microalgae and PGPB alone or combined, on the structure of the rhizosphere bacterial community, changes in species richness and bacterial diversity over time were based on sequence differences in the 16S rRNA gene, performed with PCR–denaturing gradient gel electrophoresis (DGGE) and then analyzed by similarity test and non-metric multidimensional scaling analysis. Root surface colonization and persistence in the rhizosphere of
A
.
brasilense
was monitored by fluorescent in situ hybridization and sequencing of DGGE bands. Application of waste debris significantly changed the rhizosphere bacterial population structure, whether comparisons were made over time, between inoculated and non-inoculated soil, and among different inoculated microorganisms. Species richness and diversity increased when the waste debris contained the microalgae–bacteria association and also over time. Even as its secondary role as an inoculant after wastewater treatment,
A
.
brasilense
colonized the root surface profusely and persisted within the rhizosphere bacterial community. This study demonstrated that small organic amendment to desert soil significantly changed soil bacterial community compared to the original soil and also 2 months after amendments were added.</description><subject>Agriculture</subject><subject>Agronomy. Soil science and plant productions</subject><subject>Azospirillum brasilense</subject><subject>Bacteria</subject><subject>Biochemistry and biology</subject><subject>Biological and medical sciences</subject><subject>Biomedical and Life Sciences</subject><subject>Chemical, physicochemical, biochemical and biological properties</subject><subject>Chlorella sorokiniana</subject><subject>Community ecology</subject><subject>Community structure</subject><subject>Desert soils</subject><subject>Deserts</subject><subject>Detritus</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>General agronomy. Plant production</subject><subject>Life Sciences</subject><subject>Microalgae</subject><subject>Microbiology</subject><subject>Microorganisms</subject><subject>Original Paper</subject><subject>Other nutrients. Amendments. Solid and liquid wastes. Sludges and slurries</subject><subject>Physics, chemistry, biochemistry and biology of agricultural and forest soils</subject><subject>Plant growth</subject><subject>Population structure</subject><subject>Rhizosphere</subject><subject>Soil conditioners</subject><subject>Soil fertility</subject><subject>Soil microorganisms</subject><subject>Soil science</subject><subject>Soil Science & Conservation</subject><subject>Soil-plant relationships. Soil fertility. Fertilization. Amendments</subject><subject>Soils</subject><subject>Species diversity</subject><subject>Species richness</subject><subject>Tertiary wastewater treatment</subject><issn>0178-2762</issn><issn>1432-0789</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2013</creationdate><recordtype>article</recordtype><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNp1kd2KFDEQhRtRcFx9AO8CInixrUn_JX05DOsPLHij1006qZ6pNZ2MqbTD7HP6QGbsRUTwIiSVfKdOhVMULwV_KziX74jzWjYlF3XJZd-X4lGxEU1d5Ur1j4sNF1KVleyqp8UzojvORatEvyl-bmfwNq_EwsQs7KO2YPOBICZGAR07YTqwk6YEJ50g5rcxIjETfNLo0e8ZznMY0eF9Vu4OLkRwTmdxDN8yoL1m2lu2vQ90xIjOLTMboyZ04AkY4d7jhEb75M5sDjYXQKv3qE22RO2y3TwvHtOZUYqLSUuEa2bxB0TKl9e_HSKagwei58WTSTuCFw_7VfH1_c2X3cfy9vOHT7vtbWlq2adSVzA2ZpS2qkGJqTNqspxXtZTjVHVj341qNAKgBStVYxrd6M70YCcuFAfe1lfFm7XvMYbvC1AaZiRz-byHsNAgmla1dd92MqOv_kHvwhJ9ni5TjeSqUpJnSqyUiYEowjQcI846ngfBh0vOw5rzkHMeLjkPImteP3TWZLSbovYG6Y-wkj3v2q7OXLVylJ_8HuJfE_y3-S_sp7-x</recordid><startdate>20131101</startdate><enddate>20131101</enddate><creator>Lopez, Blanca R.</creator><creator>Bashan, Yoav</creator><creator>Trejo, Adan</creator><creator>de-Bashan, Luz E.</creator><general>Springer Berlin Heidelberg</general><general>Springer</general><general>Springer Nature B.V</general><scope>IQODW</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7SN</scope><scope>7T7</scope><scope>7UA</scope><scope>7X2</scope><scope>7XB</scope><scope>88I</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>F1W</scope><scope>FR3</scope><scope>GNUQQ</scope><scope>H95</scope><scope>HCIFZ</scope><scope>L.G</scope><scope>LK8</scope><scope>M0K</scope><scope>M2P</scope><scope>M7P</scope><scope>P64</scope><scope>PATMY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PYCSY</scope><scope>Q9U</scope><scope>7QH</scope><scope>7QL</scope><scope>H97</scope></search><sort><creationdate>20131101</creationdate><title>Amendment of degraded desert soil with wastewater debris containing immobilized Chlorella sorokiniana and Azospirillum brasilense significantly modifies soil bacterial community structure, diversity, and richness</title><author>Lopez, Blanca R. ; Bashan, Yoav ; Trejo, Adan ; de-Bashan, Luz E.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c379t-a2eb4cb7d23e81f6c8fd002377bf26b96b8bc1ee5ed784c4a4a6c9edf0180e053</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2013</creationdate><topic>Agriculture</topic><topic>Agronomy. Soil science and plant productions</topic><topic>Azospirillum brasilense</topic><topic>Bacteria</topic><topic>Biochemistry and biology</topic><topic>Biological and medical sciences</topic><topic>Biomedical and Life Sciences</topic><topic>Chemical, physicochemical, biochemical and biological properties</topic><topic>Chlorella sorokiniana</topic><topic>Community ecology</topic><topic>Community structure</topic><topic>Desert soils</topic><topic>Deserts</topic><topic>Detritus</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>General agronomy. Plant production</topic><topic>Life Sciences</topic><topic>Microalgae</topic><topic>Microbiology</topic><topic>Microorganisms</topic><topic>Original Paper</topic><topic>Other nutrients. Amendments. Solid and liquid wastes. Sludges and slurries</topic><topic>Physics, chemistry, biochemistry and biology of agricultural and forest soils</topic><topic>Plant growth</topic><topic>Population structure</topic><topic>Rhizosphere</topic><topic>Soil conditioners</topic><topic>Soil fertility</topic><topic>Soil microorganisms</topic><topic>Soil science</topic><topic>Soil Science & Conservation</topic><topic>Soil-plant relationships. Soil fertility. Fertilization. Amendments</topic><topic>Soils</topic><topic>Species diversity</topic><topic>Species richness</topic><topic>Tertiary wastewater treatment</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Lopez, Blanca R.</creatorcontrib><creatorcontrib>Bashan, Yoav</creatorcontrib><creatorcontrib>Trejo, Adan</creatorcontrib><creatorcontrib>de-Bashan, Luz E.</creatorcontrib><collection>Pascal-Francis</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Ecology Abstracts</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Water Resources Abstracts</collection><collection>Agricultural Science Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Science Database (Alumni Edition)</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central UK/Ireland</collection><collection>Agricultural & Environmental Science Collection</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Engineering Research Database</collection><collection>ProQuest Central Student</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources</collection><collection>SciTech Premium Collection</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><collection>ProQuest Biological Science Collection</collection><collection>Agricultural Science Database</collection><collection>Science Database</collection><collection>Biological Science Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Environmental Science Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>Environmental Science Collection</collection><collection>ProQuest Central Basic</collection><collection>Aqualine</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 3: Aquatic Pollution & Environmental Quality</collection><jtitle>Biology and fertility of soils</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Lopez, Blanca R.</au><au>Bashan, Yoav</au><au>Trejo, Adan</au><au>de-Bashan, Luz E.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Amendment of degraded desert soil with wastewater debris containing immobilized Chlorella sorokiniana and Azospirillum brasilense significantly modifies soil bacterial community structure, diversity, and richness</atitle><jtitle>Biology and fertility of soils</jtitle><stitle>Biol Fertil Soils</stitle><date>2013-11-01</date><risdate>2013</risdate><volume>49</volume><issue>8</issue><spage>1053</spage><epage>1063</epage><pages>1053-1063</pages><issn>0178-2762</issn><eissn>1432-0789</eissn><coden>BFSOEE</coden><abstract>The main goal of this study was to expand our knowledge of what happens to the soil bacterial community in an eroded desert soil when improvement of soil fertility is derived from the application of debris of tertiary wastewater treatment containing immobilized microalgae
Chlorella sorokiniana
and the plant growth-promoting bacterium (PGPB)
Azospirillum brasilense
. We hypothesized that an “improved” non-agricultural desert soil will exhibit substantial changes in the structure of the bacterial community in a relatively short time after amendment. To assess the effect of the amendments, microalgae and PGPB alone or combined, on the structure of the rhizosphere bacterial community, changes in species richness and bacterial diversity over time were based on sequence differences in the 16S rRNA gene, performed with PCR–denaturing gradient gel electrophoresis (DGGE) and then analyzed by similarity test and non-metric multidimensional scaling analysis. Root surface colonization and persistence in the rhizosphere of
A
.
brasilense
was monitored by fluorescent in situ hybridization and sequencing of DGGE bands. Application of waste debris significantly changed the rhizosphere bacterial population structure, whether comparisons were made over time, between inoculated and non-inoculated soil, and among different inoculated microorganisms. Species richness and diversity increased when the waste debris contained the microalgae–bacteria association and also over time. Even as its secondary role as an inoculant after wastewater treatment,
A
.
brasilense
colonized the root surface profusely and persisted within the rhizosphere bacterial community. This study demonstrated that small organic amendment to desert soil significantly changed soil bacterial community compared to the original soil and also 2 months after amendments were added.</abstract><cop>Berlin/Heidelberg</cop><pub>Springer Berlin Heidelberg</pub><doi>10.1007/s00374-013-0799-1</doi><tpages>11</tpages></addata></record> |
| fulltext | fulltext |
| identifier | ISSN: 0178-2762 |
| ispartof | Biology and fertility of soils, 2013-11, Vol.49 (8), p.1053-1063 |
| issn | 0178-2762 1432-0789 |
| language | eng |
| recordid | cdi_proquest_miscellaneous_1458539567 |
| source | SpringerLink Journals - AutoHoldings |
| subjects | Agriculture Agronomy. Soil science and plant productions Azospirillum brasilense Bacteria Biochemistry and biology Biological and medical sciences Biomedical and Life Sciences Chemical, physicochemical, biochemical and biological properties Chlorella sorokiniana Community ecology Community structure Desert soils Deserts Detritus Fundamental and applied biological sciences. Psychology General agronomy. Plant production Life Sciences Microalgae Microbiology Microorganisms Original Paper Other nutrients. Amendments. Solid and liquid wastes. Sludges and slurries Physics, chemistry, biochemistry and biology of agricultural and forest soils Plant growth Population structure Rhizosphere Soil conditioners Soil fertility Soil microorganisms Soil science Soil Science & Conservation Soil-plant relationships. Soil fertility. Fertilization. Amendments Soils Species diversity Species richness Tertiary wastewater treatment |
| title | Amendment of degraded desert soil with wastewater debris containing immobilized Chlorella sorokiniana and Azospirillum brasilense significantly modifies soil bacterial community structure, diversity, and richness |
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