Alteromonas australica sp. nov., isolated from the Tasman Sea
A non-pigmented, motile, Gram-negative bacterium designated H 17 T was isolated from a seawater sample collected in Port Phillip Bay (the Tasman Sea, Pacific Ocean). The new organism displayed optimal growth between 4 and 37 °C, was found to be neutrophilic and slightly halophilic, tolerating salt w...
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container_title | Antonie van Leeuwenhoek |
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description | A non-pigmented, motile, Gram-negative bacterium designated H 17
T
was isolated from a seawater sample collected in Port Phillip Bay (the Tasman Sea, Pacific Ocean). The new organism displayed optimal growth between 4 and 37 °C, was found to be neutrophilic and slightly halophilic, tolerating salt water environments up to 10 % NaCl. Strain H 17
T
was found to be able to degrade starch and Tween 80 but unable to degrade gelatin or agar. Phosphatidylglycerol (27.7 %) and phosphatidylethanolamine (72.3 %) were found to be the only associated phospholipids. The major fatty acids identified are typical for the genus
Alteromonas
and include C
16:0
, C
16:1
ω7, C
17:1
ω8 and C
18:1
ω7. The G+C content of the DNA was found to be 43.4 mol%. A phylogenetic study, based on the 16S rRNA gene sequence analysis and Multilocus Phylogenetic Analysis, clearly indicated that strain H 17
T
belongs to the genus
Alteromonas
. The DNA−DNA relatedness between strain H 17
T
and the validly named
Alteromonas
species was between 30.7 and 46.4 mol%. Based on these results, a new species,
Alteromonas australica
, is proposed. The type strain is H 17
T
(= KMM 6016
T
= CIP 109921
T
). |
doi_str_mv | 10.1007/s10482-012-9869-x |
format | Article |
fullrecord | <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_1448219753</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>2914024071</sourcerecordid><originalsourceid>FETCH-LOGICAL-c405t-e32cb4f143c25cb9d97f5202fd4ff155a2a527af5ad3cd7292824b48af3dae443</originalsourceid><addsrcrecordid>eNqFkU1Lw0AQhhdRbK3-AC8S8OLB1P3MZg8eSvELCh6s52WS7GpKPupuIvXfuyVVRBBPw8s88w4zL0KnBE8JxvLKE8xTGmNCY5UmKt7soTERMqhEqX00xhizOMGSjtCR96sgVZLKQzSijCqSMjpG17OqM66t2wZ8BL3vHFRlDpFfT6OmfZ9eRqVvK-hMEdmARd2riZbga2iiJwPH6MBC5c3Jrk7Q8-3Ncn4fLx7vHuazRZxzLLrYMJpn3BLOciryTBVKWkExtQW3lggBFASVYAUULC8kVTSlPOMpWFaA4ZxN0MXgu3btW298p-vS56aqoDFt7zXh4Q9EScH-RxlJWMoSRQJ6_gtdtb1rwiFbSiiRcCUDRQYqd633zli9dmUN7kMTrLcx6CEGHWLQ2xj0Jsyc7Zz7rDbF98TX3wNAB8CHVvNi3I_Vf7p-AqDZkPA</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>1315956497</pqid></control><display><type>article</type><title>Alteromonas australica sp. nov., isolated from the Tasman Sea</title><source>MEDLINE</source><source>SpringerLink Journals - AutoHoldings</source><creator>Ivanova, Elena P. ; Ng, Hooi Jun ; Webb, Hayden K. ; Kurilenko, Valeriya V. ; Zhukova, Natalia V. ; Mikhailov, Valery V. ; Ponamoreva, Olga N. ; Crawford, Russell J.</creator><creatorcontrib>Ivanova, Elena P. ; Ng, Hooi Jun ; Webb, Hayden K. ; Kurilenko, Valeriya V. ; Zhukova, Natalia V. ; Mikhailov, Valery V. ; Ponamoreva, Olga N. ; Crawford, Russell J.</creatorcontrib><description>A non-pigmented, motile, Gram-negative bacterium designated H 17
T
was isolated from a seawater sample collected in Port Phillip Bay (the Tasman Sea, Pacific Ocean). The new organism displayed optimal growth between 4 and 37 °C, was found to be neutrophilic and slightly halophilic, tolerating salt water environments up to 10 % NaCl. Strain H 17
T
was found to be able to degrade starch and Tween 80 but unable to degrade gelatin or agar. Phosphatidylglycerol (27.7 %) and phosphatidylethanolamine (72.3 %) were found to be the only associated phospholipids. The major fatty acids identified are typical for the genus
Alteromonas
and include C
16:0
, C
16:1
ω7, C
17:1
ω8 and C
18:1
ω7. The G+C content of the DNA was found to be 43.4 mol%. A phylogenetic study, based on the 16S rRNA gene sequence analysis and Multilocus Phylogenetic Analysis, clearly indicated that strain H 17
T
belongs to the genus
Alteromonas
. The DNA−DNA relatedness between strain H 17
T
and the validly named
Alteromonas
species was between 30.7 and 46.4 mol%. Based on these results, a new species,
Alteromonas australica
, is proposed. The type strain is H 17
T
(= KMM 6016
T
= CIP 109921
T
).</description><identifier>ISSN: 0003-6072</identifier><identifier>EISSN: 1572-9699</identifier><identifier>DOI: 10.1007/s10482-012-9869-x</identifier><identifier>PMID: 23291832</identifier><language>eng</language><publisher>Dordrecht: Springer Netherlands</publisher><subject>Alteromonas ; Alteromonas - classification ; Alteromonas - genetics ; Alteromonas - isolation & purification ; Alteromonas - physiology ; Bacterial Typing Techniques ; Bacteriology ; Base Composition ; Biomedical and Life Sciences ; Chemical analysis ; Cluster Analysis ; Deoxyribonucleic acid ; DNA ; DNA, Bacterial - chemistry ; DNA, Bacterial - genetics ; DNA, Ribosomal - chemistry ; DNA, Ribosomal - genetics ; Fatty Acids - analysis ; Gram-negative bacteria ; Life Sciences ; Marine environment ; Medical Microbiology ; Microbiology ; Molecular Sequence Data ; Nucleic Acid Hybridization ; Oceans ; Original Paper ; Pacific Ocean ; Phospholipids - analysis ; Phylogenetics ; Phylogeny ; Plant Sciences ; RNA, Ribosomal, 16S - genetics ; Saline water ; Seawater ; Seawater - microbiology ; Sequence Analysis, DNA ; Sodium chloride ; Soil Science & Conservation ; Taxonomy ; Water analysis</subject><ispartof>Antonie van Leeuwenhoek, 2013-04, Vol.103 (4), p.877-884</ispartof><rights>Springer Science+Business Media Dordrecht 2013</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c405t-e32cb4f143c25cb9d97f5202fd4ff155a2a527af5ad3cd7292824b48af3dae443</citedby><cites>FETCH-LOGICAL-c405t-e32cb4f143c25cb9d97f5202fd4ff155a2a527af5ad3cd7292824b48af3dae443</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s10482-012-9869-x$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s10482-012-9869-x$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,780,784,27924,27925,41488,42557,51319</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/23291832$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Ivanova, Elena P.</creatorcontrib><creatorcontrib>Ng, Hooi Jun</creatorcontrib><creatorcontrib>Webb, Hayden K.</creatorcontrib><creatorcontrib>Kurilenko, Valeriya V.</creatorcontrib><creatorcontrib>Zhukova, Natalia V.</creatorcontrib><creatorcontrib>Mikhailov, Valery V.</creatorcontrib><creatorcontrib>Ponamoreva, Olga N.</creatorcontrib><creatorcontrib>Crawford, Russell J.</creatorcontrib><title>Alteromonas australica sp. nov., isolated from the Tasman Sea</title><title>Antonie van Leeuwenhoek</title><addtitle>Antonie van Leeuwenhoek</addtitle><addtitle>Antonie Van Leeuwenhoek</addtitle><description>A non-pigmented, motile, Gram-negative bacterium designated H 17
T
was isolated from a seawater sample collected in Port Phillip Bay (the Tasman Sea, Pacific Ocean). The new organism displayed optimal growth between 4 and 37 °C, was found to be neutrophilic and slightly halophilic, tolerating salt water environments up to 10 % NaCl. Strain H 17
T
was found to be able to degrade starch and Tween 80 but unable to degrade gelatin or agar. Phosphatidylglycerol (27.7 %) and phosphatidylethanolamine (72.3 %) were found to be the only associated phospholipids. The major fatty acids identified are typical for the genus
Alteromonas
and include C
16:0
, C
16:1
ω7, C
17:1
ω8 and C
18:1
ω7. The G+C content of the DNA was found to be 43.4 mol%. A phylogenetic study, based on the 16S rRNA gene sequence analysis and Multilocus Phylogenetic Analysis, clearly indicated that strain H 17
T
belongs to the genus
Alteromonas
. The DNA−DNA relatedness between strain H 17
T
and the validly named
Alteromonas
species was between 30.7 and 46.4 mol%. Based on these results, a new species,
Alteromonas australica
, is proposed. The type strain is H 17
T
(= KMM 6016
T
= CIP 109921
T
).</description><subject>Alteromonas</subject><subject>Alteromonas - classification</subject><subject>Alteromonas - genetics</subject><subject>Alteromonas - isolation & purification</subject><subject>Alteromonas - physiology</subject><subject>Bacterial Typing Techniques</subject><subject>Bacteriology</subject><subject>Base Composition</subject><subject>Biomedical and Life Sciences</subject><subject>Chemical analysis</subject><subject>Cluster Analysis</subject><subject>Deoxyribonucleic acid</subject><subject>DNA</subject><subject>DNA, Bacterial - chemistry</subject><subject>DNA, Bacterial - genetics</subject><subject>DNA, Ribosomal - chemistry</subject><subject>DNA, Ribosomal - genetics</subject><subject>Fatty Acids - analysis</subject><subject>Gram-negative bacteria</subject><subject>Life Sciences</subject><subject>Marine environment</subject><subject>Medical Microbiology</subject><subject>Microbiology</subject><subject>Molecular Sequence Data</subject><subject>Nucleic Acid Hybridization</subject><subject>Oceans</subject><subject>Original Paper</subject><subject>Pacific Ocean</subject><subject>Phospholipids - analysis</subject><subject>Phylogenetics</subject><subject>Phylogeny</subject><subject>Plant Sciences</subject><subject>RNA, Ribosomal, 16S - genetics</subject><subject>Saline water</subject><subject>Seawater</subject><subject>Seawater - microbiology</subject><subject>Sequence Analysis, DNA</subject><subject>Sodium chloride</subject><subject>Soil Science & Conservation</subject><subject>Taxonomy</subject><subject>Water analysis</subject><issn>0003-6072</issn><issn>1572-9699</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2013</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNqFkU1Lw0AQhhdRbK3-AC8S8OLB1P3MZg8eSvELCh6s52WS7GpKPupuIvXfuyVVRBBPw8s88w4zL0KnBE8JxvLKE8xTGmNCY5UmKt7soTERMqhEqX00xhizOMGSjtCR96sgVZLKQzSijCqSMjpG17OqM66t2wZ8BL3vHFRlDpFfT6OmfZ9eRqVvK-hMEdmARd2riZbga2iiJwPH6MBC5c3Jrk7Q8-3Ncn4fLx7vHuazRZxzLLrYMJpn3BLOciryTBVKWkExtQW3lggBFASVYAUULC8kVTSlPOMpWFaA4ZxN0MXgu3btW298p-vS56aqoDFt7zXh4Q9EScH-RxlJWMoSRQJ6_gtdtb1rwiFbSiiRcCUDRQYqd633zli9dmUN7kMTrLcx6CEGHWLQ2xj0Jsyc7Zz7rDbF98TX3wNAB8CHVvNi3I_Vf7p-AqDZkPA</recordid><startdate>20130401</startdate><enddate>20130401</enddate><creator>Ivanova, Elena P.</creator><creator>Ng, Hooi Jun</creator><creator>Webb, Hayden K.</creator><creator>Kurilenko, Valeriya V.</creator><creator>Zhukova, Natalia V.</creator><creator>Mikhailov, Valery V.</creator><creator>Ponamoreva, Olga N.</creator><creator>Crawford, Russell J.</creator><general>Springer Netherlands</general><general>Springer Nature B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QL</scope><scope>7T7</scope><scope>7U9</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>88I</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M2P</scope><scope>M7N</scope><scope>M7P</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>Q9U</scope><scope>7X8</scope><scope>7TN</scope><scope>F1W</scope><scope>H95</scope><scope>H99</scope><scope>L.F</scope><scope>L.G</scope></search><sort><creationdate>20130401</creationdate><title>Alteromonas australica sp. nov., isolated from the Tasman Sea</title><author>Ivanova, Elena P. ; Ng, Hooi Jun ; Webb, Hayden K. ; Kurilenko, Valeriya V. ; Zhukova, Natalia V. ; Mikhailov, Valery V. ; Ponamoreva, Olga N. ; Crawford, Russell J.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c405t-e32cb4f143c25cb9d97f5202fd4ff155a2a527af5ad3cd7292824b48af3dae443</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2013</creationdate><topic>Alteromonas</topic><topic>Alteromonas - classification</topic><topic>Alteromonas - genetics</topic><topic>Alteromonas - isolation & purification</topic><topic>Alteromonas - physiology</topic><topic>Bacterial Typing Techniques</topic><topic>Bacteriology</topic><topic>Base Composition</topic><topic>Biomedical and Life Sciences</topic><topic>Chemical analysis</topic><topic>Cluster Analysis</topic><topic>Deoxyribonucleic acid</topic><topic>DNA</topic><topic>DNA, Bacterial - chemistry</topic><topic>DNA, Bacterial - genetics</topic><topic>DNA, Ribosomal - chemistry</topic><topic>DNA, Ribosomal - genetics</topic><topic>Fatty Acids - analysis</topic><topic>Gram-negative bacteria</topic><topic>Life Sciences</topic><topic>Marine environment</topic><topic>Medical Microbiology</topic><topic>Microbiology</topic><topic>Molecular Sequence Data</topic><topic>Nucleic Acid Hybridization</topic><topic>Oceans</topic><topic>Original Paper</topic><topic>Pacific Ocean</topic><topic>Phospholipids - analysis</topic><topic>Phylogenetics</topic><topic>Phylogeny</topic><topic>Plant Sciences</topic><topic>RNA, Ribosomal, 16S - genetics</topic><topic>Saline water</topic><topic>Seawater</topic><topic>Seawater - microbiology</topic><topic>Sequence Analysis, DNA</topic><topic>Sodium chloride</topic><topic>Soil Science & Conservation</topic><topic>Taxonomy</topic><topic>Water analysis</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Ivanova, Elena P.</creatorcontrib><creatorcontrib>Ng, Hooi Jun</creatorcontrib><creatorcontrib>Webb, Hayden K.</creatorcontrib><creatorcontrib>Kurilenko, Valeriya V.</creatorcontrib><creatorcontrib>Zhukova, Natalia V.</creatorcontrib><creatorcontrib>Mikhailov, Valery V.</creatorcontrib><creatorcontrib>Ponamoreva, Olga N.</creatorcontrib><creatorcontrib>Crawford, Russell J.</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Virology and AIDS Abstracts</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Science Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Science Database</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biological Science Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central Basic</collection><collection>MEDLINE - Academic</collection><collection>Oceanic Abstracts</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources</collection><collection>ASFA: Marine Biotechnology Abstracts</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Marine Biotechnology Abstracts</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><jtitle>Antonie van Leeuwenhoek</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Ivanova, Elena P.</au><au>Ng, Hooi Jun</au><au>Webb, Hayden K.</au><au>Kurilenko, Valeriya V.</au><au>Zhukova, Natalia V.</au><au>Mikhailov, Valery V.</au><au>Ponamoreva, Olga N.</au><au>Crawford, Russell J.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Alteromonas australica sp. nov., isolated from the Tasman Sea</atitle><jtitle>Antonie van Leeuwenhoek</jtitle><stitle>Antonie van Leeuwenhoek</stitle><addtitle>Antonie Van Leeuwenhoek</addtitle><date>2013-04-01</date><risdate>2013</risdate><volume>103</volume><issue>4</issue><spage>877</spage><epage>884</epage><pages>877-884</pages><issn>0003-6072</issn><eissn>1572-9699</eissn><abstract>A non-pigmented, motile, Gram-negative bacterium designated H 17
T
was isolated from a seawater sample collected in Port Phillip Bay (the Tasman Sea, Pacific Ocean). The new organism displayed optimal growth between 4 and 37 °C, was found to be neutrophilic and slightly halophilic, tolerating salt water environments up to 10 % NaCl. Strain H 17
T
was found to be able to degrade starch and Tween 80 but unable to degrade gelatin or agar. Phosphatidylglycerol (27.7 %) and phosphatidylethanolamine (72.3 %) were found to be the only associated phospholipids. The major fatty acids identified are typical for the genus
Alteromonas
and include C
16:0
, C
16:1
ω7, C
17:1
ω8 and C
18:1
ω7. The G+C content of the DNA was found to be 43.4 mol%. A phylogenetic study, based on the 16S rRNA gene sequence analysis and Multilocus Phylogenetic Analysis, clearly indicated that strain H 17
T
belongs to the genus
Alteromonas
. The DNA−DNA relatedness between strain H 17
T
and the validly named
Alteromonas
species was between 30.7 and 46.4 mol%. Based on these results, a new species,
Alteromonas australica
, is proposed. The type strain is H 17
T
(= KMM 6016
T
= CIP 109921
T
).</abstract><cop>Dordrecht</cop><pub>Springer Netherlands</pub><pmid>23291832</pmid><doi>10.1007/s10482-012-9869-x</doi><tpages>8</tpages></addata></record> |
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source | MEDLINE; SpringerLink Journals - AutoHoldings |
subjects | Alteromonas Alteromonas - classification Alteromonas - genetics Alteromonas - isolation & purification Alteromonas - physiology Bacterial Typing Techniques Bacteriology Base Composition Biomedical and Life Sciences Chemical analysis Cluster Analysis Deoxyribonucleic acid DNA DNA, Bacterial - chemistry DNA, Bacterial - genetics DNA, Ribosomal - chemistry DNA, Ribosomal - genetics Fatty Acids - analysis Gram-negative bacteria Life Sciences Marine environment Medical Microbiology Microbiology Molecular Sequence Data Nucleic Acid Hybridization Oceans Original Paper Pacific Ocean Phospholipids - analysis Phylogenetics Phylogeny Plant Sciences RNA, Ribosomal, 16S - genetics Saline water Seawater Seawater - microbiology Sequence Analysis, DNA Sodium chloride Soil Science & Conservation Taxonomy Water analysis |
title | Alteromonas australica sp. nov., isolated from the Tasman Sea |
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