Genetic variation within the cosmopolitan aquatic fungus Lignincola laevis (Microascales, Ascomycota)

Recent estimates suggest that there are as many as 10,000 marine fungal species, although the current number stands at just over 500. Previous studies were predominantly surveys of marine fungal diversity on various substrata in Europe, north American and Asia, while little research exists on the po...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Organisms diversity & evolution 2013-09, Vol.13 (3), p.301-309
Hauptverfasser: Pang, Ka-Lai, Vrijmoed, Lilian L. P, Gareth Jones, E. B
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page 309
container_issue 3
container_start_page 301
container_title Organisms diversity & evolution
container_volume 13
creator Pang, Ka-Lai
Vrijmoed, Lilian L. P
Gareth Jones, E. B
description Recent estimates suggest that there are as many as 10,000 marine fungal species, although the current number stands at just over 500. Previous studies were predominantly surveys of marine fungal diversity on various substrata in Europe, north American and Asia, while little research exists on the possible processes leading to their current distribution. Therefore, this study was initiated to assess the genetic structure and geographical distribution of the cosmopolitan aquatic fungus Lignincola laevis. The internal transcribed spacers and partial 28S region of the rRNA gene clusters, and the partial MCM7 protein gene were sequenced and analysed using maximum parsimony and Bayesian likelihood methods. Three distinct lineages were present in the sampled L. laevis isolates with a mean pairwise distance between the groups >10 %. However, no geographical assemblages could be identified in the phylogeny. The high genetic divergence suggests that Lignincola laevis is a species complex that consists of a group of closely related species with subtle morphological differences. The lack of geographical structure in the sampled isolates of L. laevis may suggest a high dispersal capacity for L. laevis.
doi_str_mv 10.1007/s13127-013-0132-8
format Article
fullrecord <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_1448215839</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>3058156081</sourcerecordid><originalsourceid>FETCH-LOGICAL-c439t-102512dc7d13cbe3101be1579a19261e289d74a3e1d1faef0b1ca3e83e55525f3</originalsourceid><addsrcrecordid>eNp9kEFr3DAQhU1pIGnSH5BTBb2kUKcaybbkYwhtWtiQQ5uzmNWONwpeaaOxE_Lvq8U9lB56GGYGvje8eVV1DvISpDRfGDQoU0vQh1K1fVOdQAe2BmnM2zI3uq872avj6h3zo5RKAZiTim4o0hS8eMYccAopipcwPYQopgcSPvEu7dMYJowCn2Y8kMMctzOLVdjGEH0aUYxIz4HFxW3wOSF7HIk_iyv2affq04SfzqqjAUem93_6aXX_7euv6-_16u7mx_XVqvbF3lS8qhbUxpsNaL8mDRLWBK3pEXrVASnbb0yDmmADA9Ig1-DLZjW1bavaQZ9WF8vdfU5PM_HkdoE9jSNGSjM7aBqroLW6L-jHf9DHNOdY3BVKWQOd1l2hYKHKY8yZBrfPYYf51YF0h-DdErwroR9KOVs0atFwYeOW8l-X_yP6sIgGTA63ObC7_6kkNLIAFmyvfwPtpY8T</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>1428716336</pqid></control><display><type>article</type><title>Genetic variation within the cosmopolitan aquatic fungus Lignincola laevis (Microascales, Ascomycota)</title><source>SpringerNature Journals</source><creator>Pang, Ka-Lai ; Vrijmoed, Lilian L. P ; Gareth Jones, E. B</creator><creatorcontrib>Pang, Ka-Lai ; Vrijmoed, Lilian L. P ; Gareth Jones, E. B</creatorcontrib><description>Recent estimates suggest that there are as many as 10,000 marine fungal species, although the current number stands at just over 500. Previous studies were predominantly surveys of marine fungal diversity on various substrata in Europe, north American and Asia, while little research exists on the possible processes leading to their current distribution. Therefore, this study was initiated to assess the genetic structure and geographical distribution of the cosmopolitan aquatic fungus Lignincola laevis. The internal transcribed spacers and partial 28S region of the rRNA gene clusters, and the partial MCM7 protein gene were sequenced and analysed using maximum parsimony and Bayesian likelihood methods. Three distinct lineages were present in the sampled L. laevis isolates with a mean pairwise distance between the groups &gt;10 %. However, no geographical assemblages could be identified in the phylogeny. The high genetic divergence suggests that Lignincola laevis is a species complex that consists of a group of closely related species with subtle morphological differences. The lack of geographical structure in the sampled isolates of L. laevis may suggest a high dispersal capacity for L. laevis.</description><identifier>ISSN: 1439-6092</identifier><identifier>EISSN: 1618-1077</identifier><identifier>DOI: 10.1007/s13127-013-0132-8</identifier><language>eng</language><publisher>Berlin/Heidelberg: Springer-Verlag</publisher><subject>Animal Systematics/Taxonomy/Biogeography ; Aquatic fungi ; Ascomycota ; Bats ; Bayesian analysis ; Biodiversity ; Biomedical and Life Sciences ; Current distribution ; Developmental Biology ; Dispersal ; Evolutionary Biology ; Fungi ; Gene clusters ; Genetic diversity ; Genetic structure ; Genetic variation ; Geographical distribution ; internal transcribed spacers ; Life Sciences ; Lignincola laevis ; Mcm7 protein ; Microascales ; multigene family ; Original Article ; Phylogeny ; Phylogeography ; Plant Systematics/Taxonomy/Biogeography ; Probability theory ; ribosomal RNA ; rRNA 28S ; Substrata</subject><ispartof>Organisms diversity &amp; evolution, 2013-09, Vol.13 (3), p.301-309</ispartof><rights>Gesellschaft für Biologische Systematik 2013</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c439t-102512dc7d13cbe3101be1579a19261e289d74a3e1d1faef0b1ca3e83e55525f3</citedby><cites>FETCH-LOGICAL-c439t-102512dc7d13cbe3101be1579a19261e289d74a3e1d1faef0b1ca3e83e55525f3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s13127-013-0132-8$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s13127-013-0132-8$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>315,781,785,27929,27930,41493,42562,51324</link.rule.ids></links><search><creatorcontrib>Pang, Ka-Lai</creatorcontrib><creatorcontrib>Vrijmoed, Lilian L. P</creatorcontrib><creatorcontrib>Gareth Jones, E. B</creatorcontrib><title>Genetic variation within the cosmopolitan aquatic fungus Lignincola laevis (Microascales, Ascomycota)</title><title>Organisms diversity &amp; evolution</title><addtitle>Org Divers Evol</addtitle><description>Recent estimates suggest that there are as many as 10,000 marine fungal species, although the current number stands at just over 500. Previous studies were predominantly surveys of marine fungal diversity on various substrata in Europe, north American and Asia, while little research exists on the possible processes leading to their current distribution. Therefore, this study was initiated to assess the genetic structure and geographical distribution of the cosmopolitan aquatic fungus Lignincola laevis. The internal transcribed spacers and partial 28S region of the rRNA gene clusters, and the partial MCM7 protein gene were sequenced and analysed using maximum parsimony and Bayesian likelihood methods. Three distinct lineages were present in the sampled L. laevis isolates with a mean pairwise distance between the groups &gt;10 %. However, no geographical assemblages could be identified in the phylogeny. The high genetic divergence suggests that Lignincola laevis is a species complex that consists of a group of closely related species with subtle morphological differences. The lack of geographical structure in the sampled isolates of L. laevis may suggest a high dispersal capacity for L. laevis.</description><subject>Animal Systematics/Taxonomy/Biogeography</subject><subject>Aquatic fungi</subject><subject>Ascomycota</subject><subject>Bats</subject><subject>Bayesian analysis</subject><subject>Biodiversity</subject><subject>Biomedical and Life Sciences</subject><subject>Current distribution</subject><subject>Developmental Biology</subject><subject>Dispersal</subject><subject>Evolutionary Biology</subject><subject>Fungi</subject><subject>Gene clusters</subject><subject>Genetic diversity</subject><subject>Genetic structure</subject><subject>Genetic variation</subject><subject>Geographical distribution</subject><subject>internal transcribed spacers</subject><subject>Life Sciences</subject><subject>Lignincola laevis</subject><subject>Mcm7 protein</subject><subject>Microascales</subject><subject>multigene family</subject><subject>Original Article</subject><subject>Phylogeny</subject><subject>Phylogeography</subject><subject>Plant Systematics/Taxonomy/Biogeography</subject><subject>Probability theory</subject><subject>ribosomal RNA</subject><subject>rRNA 28S</subject><subject>Substrata</subject><issn>1439-6092</issn><issn>1618-1077</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2013</creationdate><recordtype>article</recordtype><recordid>eNp9kEFr3DAQhU1pIGnSH5BTBb2kUKcaybbkYwhtWtiQQ5uzmNWONwpeaaOxE_Lvq8U9lB56GGYGvje8eVV1DvISpDRfGDQoU0vQh1K1fVOdQAe2BmnM2zI3uq872avj6h3zo5RKAZiTim4o0hS8eMYccAopipcwPYQopgcSPvEu7dMYJowCn2Y8kMMctzOLVdjGEH0aUYxIz4HFxW3wOSF7HIk_iyv2affq04SfzqqjAUem93_6aXX_7euv6-_16u7mx_XVqvbF3lS8qhbUxpsNaL8mDRLWBK3pEXrVASnbb0yDmmADA9Ig1-DLZjW1bavaQZ9WF8vdfU5PM_HkdoE9jSNGSjM7aBqroLW6L-jHf9DHNOdY3BVKWQOd1l2hYKHKY8yZBrfPYYf51YF0h-DdErwroR9KOVs0atFwYeOW8l-X_yP6sIgGTA63ObC7_6kkNLIAFmyvfwPtpY8T</recordid><startdate>20130901</startdate><enddate>20130901</enddate><creator>Pang, Ka-Lai</creator><creator>Vrijmoed, Lilian L. P</creator><creator>Gareth Jones, E. B</creator><general>Springer-Verlag</general><general>Springer Berlin Heidelberg</general><general>Springer Nature B.V</general><scope>FBQ</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7SN</scope><scope>7SS</scope><scope>7TN</scope><scope>8FD</scope><scope>C1K</scope><scope>F1W</scope><scope>FR3</scope><scope>H95</scope><scope>L.G</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope></search><sort><creationdate>20130901</creationdate><title>Genetic variation within the cosmopolitan aquatic fungus Lignincola laevis (Microascales, Ascomycota)</title><author>Pang, Ka-Lai ; Vrijmoed, Lilian L. P ; Gareth Jones, E. B</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c439t-102512dc7d13cbe3101be1579a19261e289d74a3e1d1faef0b1ca3e83e55525f3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2013</creationdate><topic>Animal Systematics/Taxonomy/Biogeography</topic><topic>Aquatic fungi</topic><topic>Ascomycota</topic><topic>Bats</topic><topic>Bayesian analysis</topic><topic>Biodiversity</topic><topic>Biomedical and Life Sciences</topic><topic>Current distribution</topic><topic>Developmental Biology</topic><topic>Dispersal</topic><topic>Evolutionary Biology</topic><topic>Fungi</topic><topic>Gene clusters</topic><topic>Genetic diversity</topic><topic>Genetic structure</topic><topic>Genetic variation</topic><topic>Geographical distribution</topic><topic>internal transcribed spacers</topic><topic>Life Sciences</topic><topic>Lignincola laevis</topic><topic>Mcm7 protein</topic><topic>Microascales</topic><topic>multigene family</topic><topic>Original Article</topic><topic>Phylogeny</topic><topic>Phylogeography</topic><topic>Plant Systematics/Taxonomy/Biogeography</topic><topic>Probability theory</topic><topic>ribosomal RNA</topic><topic>rRNA 28S</topic><topic>Substrata</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Pang, Ka-Lai</creatorcontrib><creatorcontrib>Vrijmoed, Lilian L. P</creatorcontrib><creatorcontrib>Gareth Jones, E. B</creatorcontrib><collection>AGRIS</collection><collection>CrossRef</collection><collection>Ecology Abstracts</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Oceanic Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Engineering Research Database</collection><collection>Aquatic Science &amp; Fisheries Abstracts (ASFA) 1: Biological Sciences &amp; Living Resources</collection><collection>Aquatic Science &amp; Fisheries Abstracts (ASFA) Professional</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><jtitle>Organisms diversity &amp; evolution</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Pang, Ka-Lai</au><au>Vrijmoed, Lilian L. P</au><au>Gareth Jones, E. B</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Genetic variation within the cosmopolitan aquatic fungus Lignincola laevis (Microascales, Ascomycota)</atitle><jtitle>Organisms diversity &amp; evolution</jtitle><stitle>Org Divers Evol</stitle><date>2013-09-01</date><risdate>2013</risdate><volume>13</volume><issue>3</issue><spage>301</spage><epage>309</epage><pages>301-309</pages><issn>1439-6092</issn><eissn>1618-1077</eissn><abstract>Recent estimates suggest that there are as many as 10,000 marine fungal species, although the current number stands at just over 500. Previous studies were predominantly surveys of marine fungal diversity on various substrata in Europe, north American and Asia, while little research exists on the possible processes leading to their current distribution. Therefore, this study was initiated to assess the genetic structure and geographical distribution of the cosmopolitan aquatic fungus Lignincola laevis. The internal transcribed spacers and partial 28S region of the rRNA gene clusters, and the partial MCM7 protein gene were sequenced and analysed using maximum parsimony and Bayesian likelihood methods. Three distinct lineages were present in the sampled L. laevis isolates with a mean pairwise distance between the groups &gt;10 %. However, no geographical assemblages could be identified in the phylogeny. The high genetic divergence suggests that Lignincola laevis is a species complex that consists of a group of closely related species with subtle morphological differences. The lack of geographical structure in the sampled isolates of L. laevis may suggest a high dispersal capacity for L. laevis.</abstract><cop>Berlin/Heidelberg</cop><pub>Springer-Verlag</pub><doi>10.1007/s13127-013-0132-8</doi><tpages>9</tpages></addata></record>
fulltext fulltext
identifier ISSN: 1439-6092
ispartof Organisms diversity & evolution, 2013-09, Vol.13 (3), p.301-309
issn 1439-6092
1618-1077
language eng
recordid cdi_proquest_miscellaneous_1448215839
source SpringerNature Journals
subjects Animal Systematics/Taxonomy/Biogeography
Aquatic fungi
Ascomycota
Bats
Bayesian analysis
Biodiversity
Biomedical and Life Sciences
Current distribution
Developmental Biology
Dispersal
Evolutionary Biology
Fungi
Gene clusters
Genetic diversity
Genetic structure
Genetic variation
Geographical distribution
internal transcribed spacers
Life Sciences
Lignincola laevis
Mcm7 protein
Microascales
multigene family
Original Article
Phylogeny
Phylogeography
Plant Systematics/Taxonomy/Biogeography
Probability theory
ribosomal RNA
rRNA 28S
Substrata
title Genetic variation within the cosmopolitan aquatic fungus Lignincola laevis (Microascales, Ascomycota)
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2024-12-14T18%3A47%3A06IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Genetic%20variation%20within%20the%20cosmopolitan%20aquatic%20fungus%20Lignincola%20laevis%20(Microascales,%20Ascomycota)&rft.jtitle=Organisms%20diversity%20&%20evolution&rft.au=Pang,%20Ka-Lai&rft.date=2013-09-01&rft.volume=13&rft.issue=3&rft.spage=301&rft.epage=309&rft.pages=301-309&rft.issn=1439-6092&rft.eissn=1618-1077&rft_id=info:doi/10.1007/s13127-013-0132-8&rft_dat=%3Cproquest_cross%3E3058156081%3C/proquest_cross%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=1428716336&rft_id=info:pmid/&rfr_iscdi=true