Comparative analysis of cloned cDNAs encoding Chinese yellow cattle and Gansu black swine integrin receptors for foot-and-mouth disease virus
To analyze foot-and-mouth disease virus tropism and host range with respect to the integrin receptor, we cloned cDNAs encoding the integrin αν, β1, β3, β6 and β8 subunits from Chinese yellow cattle and Gansu black swine and carried out comparative analysis of their molecular characteristics. The len...
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Veröffentlicht in: | Archives of virology 2013-10, Vol.158 (10), p.2069-2078 |
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creator | Du, Ping Shang, Youjun Yin, Shuanghui Zhang, Keshan Wang, Guangxiang Lv, Zhanlu Yang, Shunli Wu, Jinyan Jin, Ye Chen, Yan Liu, Yongjie Tian, Hong Liu, Xiangtao |
description | To analyze foot-and-mouth disease virus tropism and host range with respect to the integrin receptor, we cloned cDNAs encoding the integrin αν, β1, β3, β6 and β8 subunits from Chinese yellow cattle and Gansu black swine and carried out comparative analysis of their molecular characteristics. The lengths of the mature proteins and the functional domains of the four integrin β subunits were the same between bovine and swine; however, the number of putative N-linked glycosylation sites and cysteine residues and their arrangement varied. Homology analysis of the nucleotide and amino acid sequences showed that FMDV integrin receptors of Chinese yellow cattle and Gansu black swine are highly conserved. Phylogenetic analysis showed that all FMDV integrin receptor subunits of cattle and swine are clustered into the Artiodactyla group; however, Chinese yellow cattle are phylogenetically closer to sheep than to Gansu black swine. We postulate that the host tropism of FMDV may, in part, be related to the divergence of integrin subunits among different species. |
doi_str_mv | 10.1007/s00705-013-1704-9 |
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The lengths of the mature proteins and the functional domains of the four integrin β subunits were the same between bovine and swine; however, the number of putative N-linked glycosylation sites and cysteine residues and their arrangement varied. Homology analysis of the nucleotide and amino acid sequences showed that FMDV integrin receptors of Chinese yellow cattle and Gansu black swine are highly conserved. Phylogenetic analysis showed that all FMDV integrin receptor subunits of cattle and swine are clustered into the Artiodactyla group; however, Chinese yellow cattle are phylogenetically closer to sheep than to Gansu black swine. We postulate that the host tropism of FMDV may, in part, be related to the divergence of integrin subunits among different species.</description><identifier>ISSN: 0304-8608</identifier><identifier>EISSN: 1432-8798</identifier><identifier>DOI: 10.1007/s00705-013-1704-9</identifier><identifier>PMID: 23620003</identifier><language>eng</language><publisher>Vienna: Springer Vienna</publisher><subject>Amino Acid Sequence ; Animals ; Artiodactyla ; Biomedical and Life Sciences ; Biomedicine ; Cattle ; Cattle - genetics ; Cattle - metabolism ; Cloning ; Cloning, Molecular ; Comparative analysis ; Cysteine ; DNA, Complementary - genetics ; DNA, Complementary - metabolism ; Foot & mouth disease ; Foot-and-Mouth Disease Virus - physiology ; Heparan sulfate ; Hogs ; Infections ; Infectious Diseases ; Integrin alpha Chains - genetics ; Integrin alpha Chains - metabolism ; Integrins - genetics ; Integrins - metabolism ; Ligands ; Medical Microbiology ; Original Article ; Phylogeny ; Swine - genetics ; Swine - metabolism ; Virology ; Viruses</subject><ispartof>Archives of virology, 2013-10, Vol.158 (10), p.2069-2078</ispartof><rights>Springer-Verlag Wien 2013</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c357t-9623c0701ed1da1c5bcbe20bdbbabd4356dcaffb79fbba766f5fa23edb7806a03</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s00705-013-1704-9$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s00705-013-1704-9$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,776,780,27901,27902,41464,42533,51294</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/23620003$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Du, Ping</creatorcontrib><creatorcontrib>Shang, Youjun</creatorcontrib><creatorcontrib>Yin, Shuanghui</creatorcontrib><creatorcontrib>Zhang, Keshan</creatorcontrib><creatorcontrib>Wang, Guangxiang</creatorcontrib><creatorcontrib>Lv, Zhanlu</creatorcontrib><creatorcontrib>Yang, Shunli</creatorcontrib><creatorcontrib>Wu, Jinyan</creatorcontrib><creatorcontrib>Jin, Ye</creatorcontrib><creatorcontrib>Chen, Yan</creatorcontrib><creatorcontrib>Liu, Yongjie</creatorcontrib><creatorcontrib>Tian, Hong</creatorcontrib><creatorcontrib>Liu, Xiangtao</creatorcontrib><title>Comparative analysis of cloned cDNAs encoding Chinese yellow cattle and Gansu black swine integrin receptors for foot-and-mouth disease virus</title><title>Archives of virology</title><addtitle>Arch Virol</addtitle><addtitle>Arch Virol</addtitle><description>To analyze foot-and-mouth disease virus tropism and host range with respect to the integrin receptor, we cloned cDNAs encoding the integrin αν, β1, β3, β6 and β8 subunits from Chinese yellow cattle and Gansu black swine and carried out comparative analysis of their molecular characteristics. The lengths of the mature proteins and the functional domains of the four integrin β subunits were the same between bovine and swine; however, the number of putative N-linked glycosylation sites and cysteine residues and their arrangement varied. Homology analysis of the nucleotide and amino acid sequences showed that FMDV integrin receptors of Chinese yellow cattle and Gansu black swine are highly conserved. Phylogenetic analysis showed that all FMDV integrin receptor subunits of cattle and swine are clustered into the Artiodactyla group; however, Chinese yellow cattle are phylogenetically closer to sheep than to Gansu black swine. We postulate that the host tropism of FMDV may, in part, be related to the divergence of integrin subunits among different species.</description><subject>Amino Acid Sequence</subject><subject>Animals</subject><subject>Artiodactyla</subject><subject>Biomedical and Life Sciences</subject><subject>Biomedicine</subject><subject>Cattle</subject><subject>Cattle - genetics</subject><subject>Cattle - metabolism</subject><subject>Cloning</subject><subject>Cloning, Molecular</subject><subject>Comparative analysis</subject><subject>Cysteine</subject><subject>DNA, Complementary - genetics</subject><subject>DNA, Complementary - metabolism</subject><subject>Foot & mouth disease</subject><subject>Foot-and-Mouth Disease Virus - physiology</subject><subject>Heparan sulfate</subject><subject>Hogs</subject><subject>Infections</subject><subject>Infectious Diseases</subject><subject>Integrin alpha Chains - genetics</subject><subject>Integrin alpha Chains - metabolism</subject><subject>Integrins - genetics</subject><subject>Integrins - metabolism</subject><subject>Ligands</subject><subject>Medical Microbiology</subject><subject>Original Article</subject><subject>Phylogeny</subject><subject>Swine - genetics</subject><subject>Swine - metabolism</subject><subject>Virology</subject><subject>Viruses</subject><issn>0304-8608</issn><issn>1432-8798</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2013</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>BENPR</sourceid><recordid>eNqNkc1u1TAQhS0EopfCA7BBltiwCfgniZNldYGCVMEG1pZ_JrcuiX3xJK3uQ_DOOEpBCAmJhW3N-DvHGh9CnnP2mjOm3mDZWFMxLiuuWF31D8iO11JUneq7h2THZGl2LevOyBPEG8ZKQzaPyZmQrVirHfmxT9PRZDOHW6AmmvGEAWkaqBtTBE_d208XSCG65EM80P11iIBATzCO6Y46M8_jqvP00kRcqB2N-0bxrlA0xBkOOUSawcFxThnpkHJZaa6KoprSMl9THxBMcbwNecGn5NFgRoRn9-c5-fr-3Zf9h-rq8-XH_cVV5WSj5qpvhXRldA6ee8NdY50Fway31lhfy6b1zgyDVf1QOqpth2YwQoK3qmOtYfKcvNp8jzl9XwBnPQV0ZSYTIS2oeV1LqWrF1H-gUjWdaJu-oC__Qm_SksufbhSvRcu7QvGNcjkhZhj0MYfJ5JPmTK-x6i1WXWLVa6x6dX5x77zYCfxvxa8cCyA2AMtVPED-4-l_uv4EEcqvqA</recordid><startdate>20131001</startdate><enddate>20131001</enddate><creator>Du, Ping</creator><creator>Shang, Youjun</creator><creator>Yin, Shuanghui</creator><creator>Zhang, Keshan</creator><creator>Wang, Guangxiang</creator><creator>Lv, Zhanlu</creator><creator>Yang, Shunli</creator><creator>Wu, Jinyan</creator><creator>Jin, Ye</creator><creator>Chen, Yan</creator><creator>Liu, Yongjie</creator><creator>Tian, Hong</creator><creator>Liu, Xiangtao</creator><general>Springer Vienna</general><general>Springer Nature B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7TK</scope><scope>7TM</scope><scope>7U9</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>8AO</scope><scope>8C1</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M7P</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>20131001</creationdate><title>Comparative analysis of cloned cDNAs encoding Chinese yellow cattle and Gansu black swine integrin receptors for foot-and-mouth disease virus</title><author>Du, Ping ; Shang, Youjun ; Yin, Shuanghui ; Zhang, Keshan ; Wang, Guangxiang ; Lv, Zhanlu ; Yang, Shunli ; Wu, Jinyan ; Jin, Ye ; Chen, Yan ; Liu, Yongjie ; Tian, Hong ; Liu, Xiangtao</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c357t-9623c0701ed1da1c5bcbe20bdbbabd4356dcaffb79fbba766f5fa23edb7806a03</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2013</creationdate><topic>Amino Acid Sequence</topic><topic>Animals</topic><topic>Artiodactyla</topic><topic>Biomedical and Life Sciences</topic><topic>Biomedicine</topic><topic>Cattle</topic><topic>Cattle - genetics</topic><topic>Cattle - metabolism</topic><topic>Cloning</topic><topic>Cloning, Molecular</topic><topic>Comparative analysis</topic><topic>Cysteine</topic><topic>DNA, Complementary - genetics</topic><topic>DNA, Complementary - metabolism</topic><topic>Foot & mouth disease</topic><topic>Foot-and-Mouth Disease Virus - physiology</topic><topic>Heparan sulfate</topic><topic>Hogs</topic><topic>Infections</topic><topic>Infectious Diseases</topic><topic>Integrin alpha Chains - genetics</topic><topic>Integrin alpha Chains - metabolism</topic><topic>Integrins - genetics</topic><topic>Integrins - metabolism</topic><topic>Ligands</topic><topic>Medical Microbiology</topic><topic>Original Article</topic><topic>Phylogeny</topic><topic>Swine - genetics</topic><topic>Swine - metabolism</topic><topic>Virology</topic><topic>Viruses</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Du, Ping</creatorcontrib><creatorcontrib>Shang, Youjun</creatorcontrib><creatorcontrib>Yin, Shuanghui</creatorcontrib><creatorcontrib>Zhang, Keshan</creatorcontrib><creatorcontrib>Wang, Guangxiang</creatorcontrib><creatorcontrib>Lv, Zhanlu</creatorcontrib><creatorcontrib>Yang, Shunli</creatorcontrib><creatorcontrib>Wu, Jinyan</creatorcontrib><creatorcontrib>Jin, Ye</creatorcontrib><creatorcontrib>Chen, Yan</creatorcontrib><creatorcontrib>Liu, Yongjie</creatorcontrib><creatorcontrib>Tian, Hong</creatorcontrib><creatorcontrib>Liu, Xiangtao</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Neurosciences Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Public Health Database</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Biological Science Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Archives of virology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Du, Ping</au><au>Shang, Youjun</au><au>Yin, Shuanghui</au><au>Zhang, Keshan</au><au>Wang, Guangxiang</au><au>Lv, Zhanlu</au><au>Yang, Shunli</au><au>Wu, Jinyan</au><au>Jin, Ye</au><au>Chen, Yan</au><au>Liu, Yongjie</au><au>Tian, Hong</au><au>Liu, Xiangtao</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Comparative analysis of cloned cDNAs encoding Chinese yellow cattle and Gansu black swine integrin receptors for foot-and-mouth disease virus</atitle><jtitle>Archives of virology</jtitle><stitle>Arch Virol</stitle><addtitle>Arch Virol</addtitle><date>2013-10-01</date><risdate>2013</risdate><volume>158</volume><issue>10</issue><spage>2069</spage><epage>2078</epage><pages>2069-2078</pages><issn>0304-8608</issn><eissn>1432-8798</eissn><abstract>To analyze foot-and-mouth disease virus tropism and host range with respect to the integrin receptor, we cloned cDNAs encoding the integrin αν, β1, β3, β6 and β8 subunits from Chinese yellow cattle and Gansu black swine and carried out comparative analysis of their molecular characteristics. The lengths of the mature proteins and the functional domains of the four integrin β subunits were the same between bovine and swine; however, the number of putative N-linked glycosylation sites and cysteine residues and their arrangement varied. Homology analysis of the nucleotide and amino acid sequences showed that FMDV integrin receptors of Chinese yellow cattle and Gansu black swine are highly conserved. Phylogenetic analysis showed that all FMDV integrin receptor subunits of cattle and swine are clustered into the Artiodactyla group; however, Chinese yellow cattle are phylogenetically closer to sheep than to Gansu black swine. We postulate that the host tropism of FMDV may, in part, be related to the divergence of integrin subunits among different species.</abstract><cop>Vienna</cop><pub>Springer Vienna</pub><pmid>23620003</pmid><doi>10.1007/s00705-013-1704-9</doi><tpages>10</tpages></addata></record> |
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subjects | Amino Acid Sequence Animals Artiodactyla Biomedical and Life Sciences Biomedicine Cattle Cattle - genetics Cattle - metabolism Cloning Cloning, Molecular Comparative analysis Cysteine DNA, Complementary - genetics DNA, Complementary - metabolism Foot & mouth disease Foot-and-Mouth Disease Virus - physiology Heparan sulfate Hogs Infections Infectious Diseases Integrin alpha Chains - genetics Integrin alpha Chains - metabolism Integrins - genetics Integrins - metabolism Ligands Medical Microbiology Original Article Phylogeny Swine - genetics Swine - metabolism Virology Viruses |
title | Comparative analysis of cloned cDNAs encoding Chinese yellow cattle and Gansu black swine integrin receptors for foot-and-mouth disease virus |
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