Characterization of shikimate dehydrogenase homologues of Corynebacterium glutamicum
The function of three Corynebacterium glutamicum shikimate dehydrogenase homologues, designated as qsuD (cgR_0495), cgR_1216, and aroE (cgR_1677), was investigated. A disruptant of aroE required shikimate for growth, whereas a qsuD-deficient strain did not grow in medium supplemented with either qui...
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creator | Kubota, Takeshi Tanaka, Yuya Hiraga, Kazumi Inui, Masayuki Yukawa, Hideaki |
description | The function of three
Corynebacterium glutamicum
shikimate dehydrogenase homologues, designated as qsuD (cgR_0495), cgR_1216, and aroE (cgR_1677), was investigated. A disruptant of aroE required shikimate for growth, whereas a qsuD-deficient strain did not grow in medium supplemented with either quinate or shikimate as sole carbon sources. There was no discernible difference in growth rate between wild-type and a cgR_1216-deficient strain. Enzymatic assays showed that AroE both reduced 3-dehydroshikimate, using NADPH as cofactor, and oxidized shikimate, the reverse reaction, using NADP
+
as cofactor. The reduction reaction was ten times faster than the oxidation. QsuD reduced 3-dehydroquinate using NADH and oxidized quinate using NAD
+
as cofactor. Different from the other two homologues, the product of cgR_1216 displayed considerably lower enzyme activity for both the reduction and the oxidation. The catalytic reaction of QsuD and AroE was highly susceptible to pH. Furthermore, reduction of 3-dehydroshikimate by AroE was inhibited by high concentrations of shikimate, but neither quinate nor aromatic amino acids had any effect on the reaction. Expression of qsuD mRNA was strongly enhanced in the presence of shikimate, whereas that of cgR_1216 and aroE decreased. We conclude that while AroE is the main catalyst for shikimate production in the shikimate pathway, QsuD is essential for quinate/shikimate utilization. |
doi_str_mv | 10.1007/s00253-012-4659-y |
format | Article |
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Corynebacterium glutamicum
shikimate dehydrogenase homologues, designated as qsuD (cgR_0495), cgR_1216, and aroE (cgR_1677), was investigated. A disruptant of aroE required shikimate for growth, whereas a qsuD-deficient strain did not grow in medium supplemented with either quinate or shikimate as sole carbon sources. There was no discernible difference in growth rate between wild-type and a cgR_1216-deficient strain. Enzymatic assays showed that AroE both reduced 3-dehydroshikimate, using NADPH as cofactor, and oxidized shikimate, the reverse reaction, using NADP
+
as cofactor. The reduction reaction was ten times faster than the oxidation. QsuD reduced 3-dehydroquinate using NADH and oxidized quinate using NAD
+
as cofactor. Different from the other two homologues, the product of cgR_1216 displayed considerably lower enzyme activity for both the reduction and the oxidation. The catalytic reaction of QsuD and AroE was highly susceptible to pH. Furthermore, reduction of 3-dehydroshikimate by AroE was inhibited by high concentrations of shikimate, but neither quinate nor aromatic amino acids had any effect on the reaction. Expression of qsuD mRNA was strongly enhanced in the presence of shikimate, whereas that of cgR_1216 and aroE decreased. We conclude that while AroE is the main catalyst for shikimate production in the shikimate pathway, QsuD is essential for quinate/shikimate utilization.</description><identifier>ISSN: 0175-7598</identifier><identifier>EISSN: 1432-0614</identifier><identifier>DOI: 10.1007/s00253-012-4659-y</identifier><identifier>PMID: 23306642</identifier><language>eng</language><publisher>Berlin/Heidelberg: Springer Berlin Heidelberg</publisher><subject>Alcohol Oxidoreductases - chemistry ; Alcohol Oxidoreductases - genetics ; Alcohol Oxidoreductases - metabolism ; Amino acids ; Analysis ; Bacteria ; Bacterial Proteins - chemistry ; Bacterial Proteins - genetics ; Bacterial Proteins - metabolism ; Biomedical and Life Sciences ; Biosynthesis ; Biotechnologically Relevant Enzymes and Proteins ; Biotechnology ; Carbon sources ; Chemical properties ; Corynebacterium glutamicum ; Corynebacterium glutamicum - chemistry ; Corynebacterium glutamicum - enzymology ; Corynebacterium glutamicum - genetics ; Corynebacterium glutamicum - growth & development ; Dehydrogenase ; Dehydrogenases ; E coli ; Enzymatic activity ; Enzyme Stability ; Enzymes ; Genes ; Kinases ; Kinetics ; Life Sciences ; Microbial Genetics and Genomics ; Microbiology ; Oxidation ; Quinic Acid - metabolism ; Shikimic Acid - metabolism ; Studies ; Substrate Specificity</subject><ispartof>Applied microbiology and biotechnology, 2013-09, Vol.97 (18), p.8139-8149</ispartof><rights>Springer-Verlag Berlin Heidelberg 2013</rights><rights>COPYRIGHT 2013 Springer</rights><rights>Springer-Verlag 2013</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c609t-7eb340871962dcf1734f7cecf27a399237d0eafafaf338854b1cf4d6b49031b33</citedby><cites>FETCH-LOGICAL-c609t-7eb340871962dcf1734f7cecf27a399237d0eafafaf338854b1cf4d6b49031b33</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s00253-012-4659-y$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s00253-012-4659-y$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,776,780,27903,27904,41467,42536,51297</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/23306642$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Kubota, Takeshi</creatorcontrib><creatorcontrib>Tanaka, Yuya</creatorcontrib><creatorcontrib>Hiraga, Kazumi</creatorcontrib><creatorcontrib>Inui, Masayuki</creatorcontrib><creatorcontrib>Yukawa, Hideaki</creatorcontrib><title>Characterization of shikimate dehydrogenase homologues of Corynebacterium glutamicum</title><title>Applied microbiology and biotechnology</title><addtitle>Appl Microbiol Biotechnol</addtitle><addtitle>Appl Microbiol Biotechnol</addtitle><description>The function of three
Corynebacterium glutamicum
shikimate dehydrogenase homologues, designated as qsuD (cgR_0495), cgR_1216, and aroE (cgR_1677), was investigated. A disruptant of aroE required shikimate for growth, whereas a qsuD-deficient strain did not grow in medium supplemented with either quinate or shikimate as sole carbon sources. There was no discernible difference in growth rate between wild-type and a cgR_1216-deficient strain. Enzymatic assays showed that AroE both reduced 3-dehydroshikimate, using NADPH as cofactor, and oxidized shikimate, the reverse reaction, using NADP
+
as cofactor. The reduction reaction was ten times faster than the oxidation. QsuD reduced 3-dehydroquinate using NADH and oxidized quinate using NAD
+
as cofactor. Different from the other two homologues, the product of cgR_1216 displayed considerably lower enzyme activity for both the reduction and the oxidation. The catalytic reaction of QsuD and AroE was highly susceptible to pH. Furthermore, reduction of 3-dehydroshikimate by AroE was inhibited by high concentrations of shikimate, but neither quinate nor aromatic amino acids had any effect on the reaction. Expression of qsuD mRNA was strongly enhanced in the presence of shikimate, whereas that of cgR_1216 and aroE decreased. We conclude that while AroE is the main catalyst for shikimate production in the shikimate pathway, QsuD is essential for quinate/shikimate utilization.</description><subject>Alcohol Oxidoreductases - chemistry</subject><subject>Alcohol Oxidoreductases - genetics</subject><subject>Alcohol Oxidoreductases - metabolism</subject><subject>Amino acids</subject><subject>Analysis</subject><subject>Bacteria</subject><subject>Bacterial Proteins - chemistry</subject><subject>Bacterial Proteins - genetics</subject><subject>Bacterial Proteins - metabolism</subject><subject>Biomedical and Life Sciences</subject><subject>Biosynthesis</subject><subject>Biotechnologically Relevant Enzymes and Proteins</subject><subject>Biotechnology</subject><subject>Carbon sources</subject><subject>Chemical properties</subject><subject>Corynebacterium glutamicum</subject><subject>Corynebacterium glutamicum - chemistry</subject><subject>Corynebacterium glutamicum - enzymology</subject><subject>Corynebacterium glutamicum - genetics</subject><subject>Corynebacterium glutamicum - growth & development</subject><subject>Dehydrogenase</subject><subject>Dehydrogenases</subject><subject>E coli</subject><subject>Enzymatic activity</subject><subject>Enzyme Stability</subject><subject>Enzymes</subject><subject>Genes</subject><subject>Kinases</subject><subject>Kinetics</subject><subject>Life Sciences</subject><subject>Microbial Genetics and Genomics</subject><subject>Microbiology</subject><subject>Oxidation</subject><subject>Quinic Acid - metabolism</subject><subject>Shikimic Acid - metabolism</subject><subject>Studies</subject><subject>Substrate Specificity</subject><issn>0175-7598</issn><issn>1432-0614</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2013</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNqNkk2L1TAUhoMoznX0B7iRghtn0THfaZbDRceBAUHHdUjbk96ObTMmKVh_vSkdP64oyFkEkud9yTnnReg5wecEY_U6YkwFKzGhJZdCl8sDtCOc0RJLwh-iHSZKlEro6gQ9ifEWZ7CS8jE6oYxhKTndoZv9wQbbJAj9N5t6PxXeFfHQf-5Hm6Bo4bC0wXcw2QjFwY9-8N0McaX2PiwT1Jt4HotumJMd-2Yen6JHzg4Rnt2fp-jT2zc3-3fl9fvLq_3FddlIrFOpoGYcV4poSdvGEcW4Uw00jirLtKZMtRisW4uxqhK8Jo3jray5xozUjJ2iV5vvXfBf8q-SGfvYwDDYCfwcTZ6FplQzSv8DpZqSSkiV0Zd_oLd-DlNuZDVkVSYF_UV1dgDTT86nPMfV1FwwzrDgmohMnf-FytVCnpSfwPX5_khwdiTITIKvqbNzjObq44djlmxsE3yMAZy5C3ltYTEEmzUgZguIyXs3a0DMkjUv7pub6xHan4oficgA3YCYn6YOwm_d_9P1OzTgxAg</recordid><startdate>20130901</startdate><enddate>20130901</enddate><creator>Kubota, Takeshi</creator><creator>Tanaka, Yuya</creator><creator>Hiraga, Kazumi</creator><creator>Inui, Masayuki</creator><creator>Yukawa, Hideaki</creator><general>Springer Berlin Heidelberg</general><general>Springer</general><general>Springer Nature B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>ISR</scope><scope>3V.</scope><scope>7QL</scope><scope>7T7</scope><scope>7WY</scope><scope>7WZ</scope><scope>7X7</scope><scope>7XB</scope><scope>87Z</scope><scope>88A</scope><scope>88E</scope><scope>88I</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>8FL</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BEZIV</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FRNLG</scope><scope>FYUFA</scope><scope>F~G</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>K60</scope><scope>K6~</scope><scope>K9.</scope><scope>L.-</scope><scope>LK8</scope><scope>M0C</scope><scope>M0S</scope><scope>M1P</scope><scope>M2P</scope><scope>M7N</scope><scope>M7P</scope><scope>P64</scope><scope>PQBIZ</scope><scope>PQBZA</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>Q9U</scope><scope>7X8</scope><scope>7QO</scope></search><sort><creationdate>20130901</creationdate><title>Characterization of shikimate dehydrogenase homologues of Corynebacterium glutamicum</title><author>Kubota, Takeshi ; Tanaka, Yuya ; Hiraga, Kazumi ; Inui, Masayuki ; Yukawa, Hideaki</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c609t-7eb340871962dcf1734f7cecf27a399237d0eafafaf338854b1cf4d6b49031b33</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2013</creationdate><topic>Alcohol Oxidoreductases - chemistry</topic><topic>Alcohol Oxidoreductases - genetics</topic><topic>Alcohol Oxidoreductases - metabolism</topic><topic>Amino acids</topic><topic>Analysis</topic><topic>Bacteria</topic><topic>Bacterial Proteins - chemistry</topic><topic>Bacterial Proteins - genetics</topic><topic>Bacterial Proteins - metabolism</topic><topic>Biomedical and Life Sciences</topic><topic>Biosynthesis</topic><topic>Biotechnologically Relevant Enzymes and Proteins</topic><topic>Biotechnology</topic><topic>Carbon sources</topic><topic>Chemical properties</topic><topic>Corynebacterium glutamicum</topic><topic>Corynebacterium glutamicum - chemistry</topic><topic>Corynebacterium glutamicum - enzymology</topic><topic>Corynebacterium glutamicum - genetics</topic><topic>Corynebacterium glutamicum - growth & development</topic><topic>Dehydrogenase</topic><topic>Dehydrogenases</topic><topic>E coli</topic><topic>Enzymatic activity</topic><topic>Enzyme Stability</topic><topic>Enzymes</topic><topic>Genes</topic><topic>Kinases</topic><topic>Kinetics</topic><topic>Life Sciences</topic><topic>Microbial Genetics and Genomics</topic><topic>Microbiology</topic><topic>Oxidation</topic><topic>Quinic Acid - 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Academic</collection><collection>Biotechnology Research Abstracts</collection><jtitle>Applied microbiology and biotechnology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Kubota, Takeshi</au><au>Tanaka, Yuya</au><au>Hiraga, Kazumi</au><au>Inui, Masayuki</au><au>Yukawa, Hideaki</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Characterization of shikimate dehydrogenase homologues of Corynebacterium glutamicum</atitle><jtitle>Applied microbiology and biotechnology</jtitle><stitle>Appl Microbiol Biotechnol</stitle><addtitle>Appl Microbiol Biotechnol</addtitle><date>2013-09-01</date><risdate>2013</risdate><volume>97</volume><issue>18</issue><spage>8139</spage><epage>8149</epage><pages>8139-8149</pages><issn>0175-7598</issn><eissn>1432-0614</eissn><abstract>The function of three
Corynebacterium glutamicum
shikimate dehydrogenase homologues, designated as qsuD (cgR_0495), cgR_1216, and aroE (cgR_1677), was investigated. A disruptant of aroE required shikimate for growth, whereas a qsuD-deficient strain did not grow in medium supplemented with either quinate or shikimate as sole carbon sources. There was no discernible difference in growth rate between wild-type and a cgR_1216-deficient strain. Enzymatic assays showed that AroE both reduced 3-dehydroshikimate, using NADPH as cofactor, and oxidized shikimate, the reverse reaction, using NADP
+
as cofactor. The reduction reaction was ten times faster than the oxidation. QsuD reduced 3-dehydroquinate using NADH and oxidized quinate using NAD
+
as cofactor. Different from the other two homologues, the product of cgR_1216 displayed considerably lower enzyme activity for both the reduction and the oxidation. The catalytic reaction of QsuD and AroE was highly susceptible to pH. Furthermore, reduction of 3-dehydroshikimate by AroE was inhibited by high concentrations of shikimate, but neither quinate nor aromatic amino acids had any effect on the reaction. Expression of qsuD mRNA was strongly enhanced in the presence of shikimate, whereas that of cgR_1216 and aroE decreased. We conclude that while AroE is the main catalyst for shikimate production in the shikimate pathway, QsuD is essential for quinate/shikimate utilization.</abstract><cop>Berlin/Heidelberg</cop><pub>Springer Berlin Heidelberg</pub><pmid>23306642</pmid><doi>10.1007/s00253-012-4659-y</doi><tpages>11</tpages></addata></record> |
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subjects | Alcohol Oxidoreductases - chemistry Alcohol Oxidoreductases - genetics Alcohol Oxidoreductases - metabolism Amino acids Analysis Bacteria Bacterial Proteins - chemistry Bacterial Proteins - genetics Bacterial Proteins - metabolism Biomedical and Life Sciences Biosynthesis Biotechnologically Relevant Enzymes and Proteins Biotechnology Carbon sources Chemical properties Corynebacterium glutamicum Corynebacterium glutamicum - chemistry Corynebacterium glutamicum - enzymology Corynebacterium glutamicum - genetics Corynebacterium glutamicum - growth & development Dehydrogenase Dehydrogenases E coli Enzymatic activity Enzyme Stability Enzymes Genes Kinases Kinetics Life Sciences Microbial Genetics and Genomics Microbiology Oxidation Quinic Acid - metabolism Shikimic Acid - metabolism Studies Substrate Specificity |
title | Characterization of shikimate dehydrogenase homologues of Corynebacterium glutamicum |
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