Co-occurring grass species differ in their associated microbial community composition in a temperate native grassland
Background and aims Specific associations exist between plant species and the soil microbial community and these associations vary between habitat types and different plant groups. However, there is evidence that the associations are highly specific. Hence, we aimed to determine the specificity of p...
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description | Background and aims Specific associations exist between plant species and the soil microbial community and these associations vary between habitat types and different plant groups. However, there is evidence that the associations are highly specific. Hence, we aimed to determine the specificity of plant-microbe relationships amongst co-occurring grass species in a temperate grassland. Methods and results We examined the broad microbial groups of bacteria and fungi as well as a specific fungal group, the arbuscular mycorrhizal community amongst two dominant C₃ and C₄ species and one subdominant C₃ species using terminal restriction fragment length polymorphism (T-RFLP) analysis. We found that the two dominant species were more similar to each other in their bacterial and arbuscular mycorrhizal community composition than either was to the sub-dominant species, but not in their fungal community composition. We also found no clear evidence that those differences were directly linked to soil chemical properties. Conclusions Our results demonstrate that cooccurring grass species have a distinct soil microbial community and T-RFLP analysis is able to detect plant species effect on the microbial community composition on an extremely local scale, providing an insight into the differences in the response of bacterial, fungal and arbuscular mycorrhizal communities to different, but similar and co-occurring, plant species. |
doi_str_mv | 10.1007/s11104-012-1529-4 |
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However, there is evidence that the associations are highly specific. Hence, we aimed to determine the specificity of plant-microbe relationships amongst co-occurring grass species in a temperate grassland. Methods and results We examined the broad microbial groups of bacteria and fungi as well as a specific fungal group, the arbuscular mycorrhizal community amongst two dominant C₃ and C₄ species and one subdominant C₃ species using terminal restriction fragment length polymorphism (T-RFLP) analysis. We found that the two dominant species were more similar to each other in their bacterial and arbuscular mycorrhizal community composition than either was to the sub-dominant species, but not in their fungal community composition. We also found no clear evidence that those differences were directly linked to soil chemical properties. Conclusions Our results demonstrate that cooccurring grass species have a distinct soil microbial community and T-RFLP analysis is able to detect plant species effect on the microbial community composition on an extremely local scale, providing an insight into the differences in the response of bacterial, fungal and arbuscular mycorrhizal communities to different, but similar and co-occurring, plant species.</description><identifier>ISSN: 0032-079X</identifier><identifier>EISSN: 1573-5036</identifier><identifier>DOI: 10.1007/s11104-012-1529-4</identifier><identifier>CODEN: PLSOA2</identifier><language>eng</language><publisher>Dordrecht: Springer</publisher><subject>Agronomy. Soil science and plant productions ; Analysis ; Animal, plant and microbial ecology ; Bacteria ; Biological and medical sciences ; Biomedical and Life Sciences ; Botany ; Chemical composition ; Chemical properties ; Community composition ; Crop production ; Dominant species ; Ecology ; Economic plant physiology ; Food quality ; Fundamental and applied biological sciences. Psychology ; Fungi ; General agronomy. Plant production ; Grasses ; Grassland soils ; Grasslands ; Life Sciences ; Magnesium ; Plant Physiology ; Plant Sciences ; Plant species ; Plants ; Regular Article ; Revegetation ; Soil composition ; Soil ecology ; Soil fungi ; Soil microbiology ; Soil microorganisms ; Soil properties ; Soil samples ; Soil science ; Soil Science & Conservation ; Soil-plant relationships. Soil fertility ; Soil-plant relationships. Soil fertility. Fertilization. Amendments ; Soils ; Species ; Symbiosis (nodules, symbiotic nitrogen fixation, mycorrhiza...)</subject><ispartof>Plant and soil, 2013-07, Vol.368 (1/2), p.419-431</ispartof><rights>2013 Springer</rights><rights>Springer Science+Business Media Dordrecht 2012</rights><rights>2014 INIST-CNRS</rights><rights>COPYRIGHT 2013 Springer</rights><rights>Springer Science+Business Media Dordrecht 2013</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c440t-fe89cf748669b4068e188e905c6d17212539ed49515edd2fbc7113c172f855013</citedby><cites>FETCH-LOGICAL-c440t-fe89cf748669b4068e188e905c6d17212539ed49515edd2fbc7113c172f855013</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.jstor.org/stable/pdf/42952574$$EPDF$$P50$$Gjstor$$H</linktopdf><linktohtml>$$Uhttps://www.jstor.org/stable/42952574$$EHTML$$P50$$Gjstor$$H</linktohtml><link.rule.ids>314,778,782,801,27907,27908,41471,42540,51302,58000,58233</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=27584110$$DView record in Pascal Francis$$Hfree_for_read</backlink></links><search><creatorcontrib>Osanai, Yui</creatorcontrib><creatorcontrib>Bougoure, Damian S.</creatorcontrib><creatorcontrib>Hayden, Helen L.</creatorcontrib><creatorcontrib>Hovenden, Mark J.</creatorcontrib><title>Co-occurring grass species differ in their associated microbial community composition in a temperate native grassland</title><title>Plant and soil</title><addtitle>Plant Soil</addtitle><description>Background and aims Specific associations exist between plant species and the soil microbial community and these associations vary between habitat types and different plant groups. However, there is evidence that the associations are highly specific. Hence, we aimed to determine the specificity of plant-microbe relationships amongst co-occurring grass species in a temperate grassland. Methods and results We examined the broad microbial groups of bacteria and fungi as well as a specific fungal group, the arbuscular mycorrhizal community amongst two dominant C₃ and C₄ species and one subdominant C₃ species using terminal restriction fragment length polymorphism (T-RFLP) analysis. We found that the two dominant species were more similar to each other in their bacterial and arbuscular mycorrhizal community composition than either was to the sub-dominant species, but not in their fungal community composition. We also found no clear evidence that those differences were directly linked to soil chemical properties. Conclusions Our results demonstrate that cooccurring grass species have a distinct soil microbial community and T-RFLP analysis is able to detect plant species effect on the microbial community composition on an extremely local scale, providing an insight into the differences in the response of bacterial, fungal and arbuscular mycorrhizal communities to different, but similar and co-occurring, plant species.</description><subject>Agronomy. Soil science and plant productions</subject><subject>Analysis</subject><subject>Animal, plant and microbial ecology</subject><subject>Bacteria</subject><subject>Biological and medical sciences</subject><subject>Biomedical and Life Sciences</subject><subject>Botany</subject><subject>Chemical composition</subject><subject>Chemical properties</subject><subject>Community composition</subject><subject>Crop production</subject><subject>Dominant species</subject><subject>Ecology</subject><subject>Economic plant physiology</subject><subject>Food quality</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Fungi</subject><subject>General agronomy. Plant production</subject><subject>Grasses</subject><subject>Grassland soils</subject><subject>Grasslands</subject><subject>Life Sciences</subject><subject>Magnesium</subject><subject>Plant Physiology</subject><subject>Plant Sciences</subject><subject>Plant species</subject><subject>Plants</subject><subject>Regular Article</subject><subject>Revegetation</subject><subject>Soil composition</subject><subject>Soil ecology</subject><subject>Soil fungi</subject><subject>Soil microbiology</subject><subject>Soil microorganisms</subject><subject>Soil properties</subject><subject>Soil samples</subject><subject>Soil science</subject><subject>Soil Science & Conservation</subject><subject>Soil-plant relationships. Soil fertility</subject><subject>Soil-plant relationships. Soil fertility. Fertilization. Amendments</subject><subject>Soils</subject><subject>Species</subject><subject>Symbiosis (nodules, symbiotic nitrogen fixation, mycorrhiza...)</subject><issn>0032-079X</issn><issn>1573-5036</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2013</creationdate><recordtype>article</recordtype><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNp9kU2L1TAYhYsoeB39AS6EgAhuOuZNk6ZZDpfxAwbcKLgLuembay5tUpNUmH9vSodBXEgW-XrO4fCepnkN9BoolR8yAFDeUmAtCKZa_qQ5gJBdK2jXP20OlHaspVL9eN68yPlCtzv0h2Y9xjZau6bkw5mck8mZ5AWtx0xG7xwm4gMpP9EnUv-i9abgSGZvUzx5MxEb53kNvtxvpyVmX3wMm8aQgvOCqfIkmOJ_424_mTC-bJ45M2V89bBfNd8_3n47fm7vvn76cry5ay3ntLQOB2Wd5EPfqxOn_YAwDKiosP0IkgETncKRKwECx5G5k5UAna1fbhCCQnfVvN99lxR_rZiLnn22ONUMGNesoVNKARfQV_TtP-glrinUdJXqh77Olw2Vut6ps5lQ--BiScbWNWIdSQzofH2_6aRilILcbGEX1HnlnNDpJfnZpHsNVG_N6b05XZvTW3OaV827hygmWzO5ZIL1-VHIpBh41VSO7VxetvYw_RX5P-ZvdtEll5geTTlTggnJuz_Pt7Hm</recordid><startdate>20130701</startdate><enddate>20130701</enddate><creator>Osanai, Yui</creator><creator>Bougoure, Damian S.</creator><creator>Hayden, Helen L.</creator><creator>Hovenden, Mark J.</creator><general>Springer</general><general>Springer Netherlands</general><general>Springer Nature B.V</general><scope>IQODW</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7SN</scope><scope>7ST</scope><scope>7T7</scope><scope>7X2</scope><scope>88A</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>LK8</scope><scope>M0K</scope><scope>M7P</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>RC3</scope><scope>SOI</scope><scope>M7N</scope></search><sort><creationdate>20130701</creationdate><title>Co-occurring grass species differ in their associated microbial community composition in a temperate native grassland</title><author>Osanai, Yui ; Bougoure, Damian S. ; Hayden, Helen L. ; Hovenden, Mark J.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c440t-fe89cf748669b4068e188e905c6d17212539ed49515edd2fbc7113c172f855013</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2013</creationdate><topic>Agronomy. Soil science and plant productions</topic><topic>Analysis</topic><topic>Animal, plant and microbial ecology</topic><topic>Bacteria</topic><topic>Biological and medical sciences</topic><topic>Biomedical and Life Sciences</topic><topic>Botany</topic><topic>Chemical composition</topic><topic>Chemical properties</topic><topic>Community composition</topic><topic>Crop production</topic><topic>Dominant species</topic><topic>Ecology</topic><topic>Economic plant physiology</topic><topic>Food quality</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Fungi</topic><topic>General agronomy. Plant production</topic><topic>Grasses</topic><topic>Grassland soils</topic><topic>Grasslands</topic><topic>Life Sciences</topic><topic>Magnesium</topic><topic>Plant Physiology</topic><topic>Plant Sciences</topic><topic>Plant species</topic><topic>Plants</topic><topic>Regular Article</topic><topic>Revegetation</topic><topic>Soil composition</topic><topic>Soil ecology</topic><topic>Soil fungi</topic><topic>Soil microbiology</topic><topic>Soil microorganisms</topic><topic>Soil properties</topic><topic>Soil samples</topic><topic>Soil science</topic><topic>Soil Science & Conservation</topic><topic>Soil-plant relationships. Soil fertility</topic><topic>Soil-plant relationships. Soil fertility. Fertilization. Amendments</topic><topic>Soils</topic><topic>Species</topic><topic>Symbiosis (nodules, symbiotic nitrogen fixation, mycorrhiza...)</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Osanai, Yui</creatorcontrib><creatorcontrib>Bougoure, Damian S.</creatorcontrib><creatorcontrib>Hayden, Helen L.</creatorcontrib><creatorcontrib>Hovenden, Mark J.</creatorcontrib><collection>Pascal-Francis</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Ecology Abstracts</collection><collection>Environment Abstracts</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Agricultural Science Collection</collection><collection>Biology Database (Alumni Edition)</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central UK/Ireland</collection><collection>Agricultural & Environmental Science Collection</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection (ProQuest)</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Biological Science Collection</collection><collection>Agricultural Science Database</collection><collection>Biological Science Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>Genetics Abstracts</collection><collection>Environment Abstracts</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><jtitle>Plant and soil</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Osanai, Yui</au><au>Bougoure, Damian S.</au><au>Hayden, Helen L.</au><au>Hovenden, Mark J.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Co-occurring grass species differ in their associated microbial community composition in a temperate native grassland</atitle><jtitle>Plant and soil</jtitle><stitle>Plant Soil</stitle><date>2013-07-01</date><risdate>2013</risdate><volume>368</volume><issue>1/2</issue><spage>419</spage><epage>431</epage><pages>419-431</pages><issn>0032-079X</issn><eissn>1573-5036</eissn><coden>PLSOA2</coden><abstract>Background and aims Specific associations exist between plant species and the soil microbial community and these associations vary between habitat types and different plant groups. However, there is evidence that the associations are highly specific. Hence, we aimed to determine the specificity of plant-microbe relationships amongst co-occurring grass species in a temperate grassland. Methods and results We examined the broad microbial groups of bacteria and fungi as well as a specific fungal group, the arbuscular mycorrhizal community amongst two dominant C₃ and C₄ species and one subdominant C₃ species using terminal restriction fragment length polymorphism (T-RFLP) analysis. We found that the two dominant species were more similar to each other in their bacterial and arbuscular mycorrhizal community composition than either was to the sub-dominant species, but not in their fungal community composition. We also found no clear evidence that those differences were directly linked to soil chemical properties. Conclusions Our results demonstrate that cooccurring grass species have a distinct soil microbial community and T-RFLP analysis is able to detect plant species effect on the microbial community composition on an extremely local scale, providing an insight into the differences in the response of bacterial, fungal and arbuscular mycorrhizal communities to different, but similar and co-occurring, plant species.</abstract><cop>Dordrecht</cop><pub>Springer</pub><doi>10.1007/s11104-012-1529-4</doi><tpages>13</tpages></addata></record> |
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subjects | Agronomy. Soil science and plant productions Analysis Animal, plant and microbial ecology Bacteria Biological and medical sciences Biomedical and Life Sciences Botany Chemical composition Chemical properties Community composition Crop production Dominant species Ecology Economic plant physiology Food quality Fundamental and applied biological sciences. Psychology Fungi General agronomy. Plant production Grasses Grassland soils Grasslands Life Sciences Magnesium Plant Physiology Plant Sciences Plant species Plants Regular Article Revegetation Soil composition Soil ecology Soil fungi Soil microbiology Soil microorganisms Soil properties Soil samples Soil science Soil Science & Conservation Soil-plant relationships. Soil fertility Soil-plant relationships. Soil fertility. Fertilization. Amendments Soils Species Symbiosis (nodules, symbiotic nitrogen fixation, mycorrhiza...) |
title | Co-occurring grass species differ in their associated microbial community composition in a temperate native grassland |
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