A Hepatocellular Carcinoma 5-Gene Score Associated With Survival of Patients After Liver Resection

Background & Aims Due to the phenotypic and molecular diversity of hepatocellular carcinomas (HCC), it is a challenge to determine a patient’s prognosis. We aimed to identify new prognostic markers of patients with HCC treated by liver resection. Methods We collected 314 HCC samples from patient...

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Veröffentlicht in:Gastroenterology (New York, N.Y. 1943) N.Y. 1943), 2013-07, Vol.145 (1), p.176-187
Hauptverfasser: Nault, Jean–Charles, De Reyniès, Aurélien, Villanueva, Augusto, Calderaro, Julien, Rebouissou, Sandra, Couchy, Gabrielle, Decaens, Thomas, Franco, Dominique, Imbeaud, Sandrine, Rousseau, Francis, Azoulay, Daniel, Saric, Jean, Blanc, Jean–Frédéric, Balabaud, Charles, Bioulac–Sage, Paulette, Laurent, Alexis, Laurent–Puig, Pierre, Llovet, Josep M, Zucman–Rossi, Jessica
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container_issue 1
container_start_page 176
container_title Gastroenterology (New York, N.Y. 1943)
container_volume 145
creator Nault, Jean–Charles
De Reyniès, Aurélien
Villanueva, Augusto
Calderaro, Julien
Rebouissou, Sandra
Couchy, Gabrielle
Decaens, Thomas
Franco, Dominique
Imbeaud, Sandrine
Rousseau, Francis
Azoulay, Daniel
Saric, Jean
Blanc, Jean–Frédéric
Balabaud, Charles
Bioulac–Sage, Paulette
Laurent, Alexis
Laurent–Puig, Pierre
Llovet, Josep M
Zucman–Rossi, Jessica
description Background & Aims Due to the phenotypic and molecular diversity of hepatocellular carcinomas (HCC), it is a challenge to determine a patient’s prognosis. We aimed to identify new prognostic markers of patients with HCC treated by liver resection. Methods We collected 314 HCC samples from patients at Bordeaux (1998−2007) and Créteil (2003−2007) hospitals in France. We analyzed the gene expression patterns of the tumors and compared expression patterns with patient survival times. Using the coefficient and regression formula of the multivariate Cox model, we identified a “5-gene score” associated with survival times. This molecular score was then validated in 2 groups of patients from Europe and the United States (n = 213) and China (n = 221). Results The 5-gene score, based on combined expression level of HN1 , RAN , RAMP3 , KRT19 , and TAF9 , was associated with disease-specific survival times of 189 patients with resected HCC in Bordeaux (hazard ratio = 3.5; 95% confidence interval: 1.9−6.6; P < .0001). The association between the 5-gene score and disease-specific survival was validated in an independent cohort of 125 patients in Créteil (hazard ratio = 2.3; 95% confidence interval: 1.1−4.9; P < .0001). The 5-gene score more accurately predicted patient outcomes than gene expression signatures reported previously. In multivariate analyses, the 5-gene score was associated with disease-specific survival, independent of other clinical and pathology feature of HCC. Disease-specific survival was also predicted by combining data on microvascular invasion, the Barcelona Clinic Liver Cancer classification system, and the 5-gene score in a nomogram. The prognostic accuracy of the 5-gene score was further validated in European and US patients with hepatitis C, cirrhosis, and HCC (overall survival P  = .002) and in Asian patients with HCC with hepatitis B (overall survival, P  = .02). Combining the 5-gene score with the expression pattern of 186 genes in corresponding cirrhotic tissues increased its prognostic accuracy. Conclusions The molecular 5-gene score is associated with outcomes of patients with HCC treated by resection in different clinical settings worldwide. This new biomarker should be tested in clinical trials to stratify patients in therapeutic decisions.
doi_str_mv 10.1053/j.gastro.2013.03.051
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We aimed to identify new prognostic markers of patients with HCC treated by liver resection. Methods We collected 314 HCC samples from patients at Bordeaux (1998−2007) and Créteil (2003−2007) hospitals in France. We analyzed the gene expression patterns of the tumors and compared expression patterns with patient survival times. Using the coefficient and regression formula of the multivariate Cox model, we identified a “5-gene score” associated with survival times. This molecular score was then validated in 2 groups of patients from Europe and the United States (n = 213) and China (n = 221). Results The 5-gene score, based on combined expression level of HN1 , RAN , RAMP3 , KRT19 , and TAF9 , was associated with disease-specific survival times of 189 patients with resected HCC in Bordeaux (hazard ratio = 3.5; 95% confidence interval: 1.9−6.6; P &lt; .0001). The association between the 5-gene score and disease-specific survival was validated in an independent cohort of 125 patients in Créteil (hazard ratio = 2.3; 95% confidence interval: 1.1−4.9; P &lt; .0001). The 5-gene score more accurately predicted patient outcomes than gene expression signatures reported previously. In multivariate analyses, the 5-gene score was associated with disease-specific survival, independent of other clinical and pathology feature of HCC. Disease-specific survival was also predicted by combining data on microvascular invasion, the Barcelona Clinic Liver Cancer classification system, and the 5-gene score in a nomogram. The prognostic accuracy of the 5-gene score was further validated in European and US patients with hepatitis C, cirrhosis, and HCC (overall survival P  = .002) and in Asian patients with HCC with hepatitis B (overall survival, P  = .02). Combining the 5-gene score with the expression pattern of 186 genes in corresponding cirrhotic tissues increased its prognostic accuracy. Conclusions The molecular 5-gene score is associated with outcomes of patients with HCC treated by resection in different clinical settings worldwide. This new biomarker should be tested in clinical trials to stratify patients in therapeutic decisions.</description><identifier>ISSN: 0016-5085</identifier><identifier>EISSN: 1528-0012</identifier><identifier>DOI: 10.1053/j.gastro.2013.03.051</identifier><identifier>PMID: 23567350</identifier><language>eng</language><publisher>United States: Elsevier Inc</publisher><subject>Aged ; BCLC ; Carcinoma, Hepatocellular - genetics ; Carcinoma, Hepatocellular - mortality ; Carcinoma, Hepatocellular - surgery ; Female ; Gastroenterology and Hepatology ; Hepatectomy ; Humans ; Liver Cancer ; Liver Neoplasms - genetics ; Liver Neoplasms - mortality ; Liver Neoplasms - surgery ; Male ; Microarray Analysis ; Middle Aged ; Molecular Classification ; Nerve Tissue Proteins - genetics ; Prognosis ; Proportional Hazards Models ; ran GTP-Binding Protein - genetics ; Receptor Activity-Modifying Protein 3 - genetics ; TATA-Binding Protein Associated Factors - genetics ; Transcription Factor TFIID - genetics</subject><ispartof>Gastroenterology (New York, N.Y. 1943), 2013-07, Vol.145 (1), p.176-187</ispartof><rights>AGA Institute</rights><rights>2013 AGA Institute</rights><rights>Copyright © 2013 AGA Institute. Published by Elsevier Inc. 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We aimed to identify new prognostic markers of patients with HCC treated by liver resection. Methods We collected 314 HCC samples from patients at Bordeaux (1998−2007) and Créteil (2003−2007) hospitals in France. We analyzed the gene expression patterns of the tumors and compared expression patterns with patient survival times. Using the coefficient and regression formula of the multivariate Cox model, we identified a “5-gene score” associated with survival times. This molecular score was then validated in 2 groups of patients from Europe and the United States (n = 213) and China (n = 221). Results The 5-gene score, based on combined expression level of HN1 , RAN , RAMP3 , KRT19 , and TAF9 , was associated with disease-specific survival times of 189 patients with resected HCC in Bordeaux (hazard ratio = 3.5; 95% confidence interval: 1.9−6.6; P &lt; .0001). The association between the 5-gene score and disease-specific survival was validated in an independent cohort of 125 patients in Créteil (hazard ratio = 2.3; 95% confidence interval: 1.1−4.9; P &lt; .0001). The 5-gene score more accurately predicted patient outcomes than gene expression signatures reported previously. In multivariate analyses, the 5-gene score was associated with disease-specific survival, independent of other clinical and pathology feature of HCC. Disease-specific survival was also predicted by combining data on microvascular invasion, the Barcelona Clinic Liver Cancer classification system, and the 5-gene score in a nomogram. The prognostic accuracy of the 5-gene score was further validated in European and US patients with hepatitis C, cirrhosis, and HCC (overall survival P  = .002) and in Asian patients with HCC with hepatitis B (overall survival, P  = .02). Combining the 5-gene score with the expression pattern of 186 genes in corresponding cirrhotic tissues increased its prognostic accuracy. Conclusions The molecular 5-gene score is associated with outcomes of patients with HCC treated by resection in different clinical settings worldwide. 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De Reyniès, Aurélien ; Villanueva, Augusto ; Calderaro, Julien ; Rebouissou, Sandra ; Couchy, Gabrielle ; Decaens, Thomas ; Franco, Dominique ; Imbeaud, Sandrine ; Rousseau, Francis ; Azoulay, Daniel ; Saric, Jean ; Blanc, Jean–Frédéric ; Balabaud, Charles ; Bioulac–Sage, Paulette ; Laurent, Alexis ; Laurent–Puig, Pierre ; Llovet, Josep M ; Zucman–Rossi, Jessica</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c463t-7e910410c2d154f8277d8494ac8bddfa76f0551d692fecd729c11fae919709da3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2013</creationdate><topic>Aged</topic><topic>BCLC</topic><topic>Carcinoma, Hepatocellular - genetics</topic><topic>Carcinoma, Hepatocellular - mortality</topic><topic>Carcinoma, Hepatocellular - surgery</topic><topic>Female</topic><topic>Gastroenterology and Hepatology</topic><topic>Hepatectomy</topic><topic>Humans</topic><topic>Liver Cancer</topic><topic>Liver Neoplasms - genetics</topic><topic>Liver Neoplasms - mortality</topic><topic>Liver Neoplasms - surgery</topic><topic>Male</topic><topic>Microarray Analysis</topic><topic>Middle Aged</topic><topic>Molecular Classification</topic><topic>Nerve Tissue Proteins - genetics</topic><topic>Prognosis</topic><topic>Proportional Hazards Models</topic><topic>ran GTP-Binding Protein - genetics</topic><topic>Receptor Activity-Modifying Protein 3 - genetics</topic><topic>TATA-Binding Protein Associated Factors - genetics</topic><topic>Transcription Factor TFIID - genetics</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Nault, Jean–Charles</creatorcontrib><creatorcontrib>De Reyniès, Aurélien</creatorcontrib><creatorcontrib>Villanueva, Augusto</creatorcontrib><creatorcontrib>Calderaro, Julien</creatorcontrib><creatorcontrib>Rebouissou, Sandra</creatorcontrib><creatorcontrib>Couchy, Gabrielle</creatorcontrib><creatorcontrib>Decaens, Thomas</creatorcontrib><creatorcontrib>Franco, Dominique</creatorcontrib><creatorcontrib>Imbeaud, Sandrine</creatorcontrib><creatorcontrib>Rousseau, Francis</creatorcontrib><creatorcontrib>Azoulay, Daniel</creatorcontrib><creatorcontrib>Saric, Jean</creatorcontrib><creatorcontrib>Blanc, Jean–Frédéric</creatorcontrib><creatorcontrib>Balabaud, Charles</creatorcontrib><creatorcontrib>Bioulac–Sage, Paulette</creatorcontrib><creatorcontrib>Laurent, Alexis</creatorcontrib><creatorcontrib>Laurent–Puig, Pierre</creatorcontrib><creatorcontrib>Llovet, Josep M</creatorcontrib><creatorcontrib>Zucman–Rossi, Jessica</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Gastroenterology (New York, N.Y. 1943)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Nault, Jean–Charles</au><au>De Reyniès, Aurélien</au><au>Villanueva, Augusto</au><au>Calderaro, Julien</au><au>Rebouissou, Sandra</au><au>Couchy, Gabrielle</au><au>Decaens, Thomas</au><au>Franco, Dominique</au><au>Imbeaud, Sandrine</au><au>Rousseau, Francis</au><au>Azoulay, Daniel</au><au>Saric, Jean</au><au>Blanc, Jean–Frédéric</au><au>Balabaud, Charles</au><au>Bioulac–Sage, Paulette</au><au>Laurent, Alexis</au><au>Laurent–Puig, Pierre</au><au>Llovet, Josep M</au><au>Zucman–Rossi, Jessica</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>A Hepatocellular Carcinoma 5-Gene Score Associated With Survival of Patients After Liver Resection</atitle><jtitle>Gastroenterology (New York, N.Y. 1943)</jtitle><addtitle>Gastroenterology</addtitle><date>2013-07-01</date><risdate>2013</risdate><volume>145</volume><issue>1</issue><spage>176</spage><epage>187</epage><pages>176-187</pages><issn>0016-5085</issn><eissn>1528-0012</eissn><abstract>Background &amp; Aims Due to the phenotypic and molecular diversity of hepatocellular carcinomas (HCC), it is a challenge to determine a patient’s prognosis. We aimed to identify new prognostic markers of patients with HCC treated by liver resection. Methods We collected 314 HCC samples from patients at Bordeaux (1998−2007) and Créteil (2003−2007) hospitals in France. We analyzed the gene expression patterns of the tumors and compared expression patterns with patient survival times. Using the coefficient and regression formula of the multivariate Cox model, we identified a “5-gene score” associated with survival times. This molecular score was then validated in 2 groups of patients from Europe and the United States (n = 213) and China (n = 221). Results The 5-gene score, based on combined expression level of HN1 , RAN , RAMP3 , KRT19 , and TAF9 , was associated with disease-specific survival times of 189 patients with resected HCC in Bordeaux (hazard ratio = 3.5; 95% confidence interval: 1.9−6.6; P &lt; .0001). The association between the 5-gene score and disease-specific survival was validated in an independent cohort of 125 patients in Créteil (hazard ratio = 2.3; 95% confidence interval: 1.1−4.9; P &lt; .0001). The 5-gene score more accurately predicted patient outcomes than gene expression signatures reported previously. In multivariate analyses, the 5-gene score was associated with disease-specific survival, independent of other clinical and pathology feature of HCC. Disease-specific survival was also predicted by combining data on microvascular invasion, the Barcelona Clinic Liver Cancer classification system, and the 5-gene score in a nomogram. The prognostic accuracy of the 5-gene score was further validated in European and US patients with hepatitis C, cirrhosis, and HCC (overall survival P  = .002) and in Asian patients with HCC with hepatitis B (overall survival, P  = .02). Combining the 5-gene score with the expression pattern of 186 genes in corresponding cirrhotic tissues increased its prognostic accuracy. Conclusions The molecular 5-gene score is associated with outcomes of patients with HCC treated by resection in different clinical settings worldwide. This new biomarker should be tested in clinical trials to stratify patients in therapeutic decisions.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>23567350</pmid><doi>10.1053/j.gastro.2013.03.051</doi><tpages>12</tpages><oa>free_for_read</oa></addata></record>
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subjects Aged
BCLC
Carcinoma, Hepatocellular - genetics
Carcinoma, Hepatocellular - mortality
Carcinoma, Hepatocellular - surgery
Female
Gastroenterology and Hepatology
Hepatectomy
Humans
Liver Cancer
Liver Neoplasms - genetics
Liver Neoplasms - mortality
Liver Neoplasms - surgery
Male
Microarray Analysis
Middle Aged
Molecular Classification
Nerve Tissue Proteins - genetics
Prognosis
Proportional Hazards Models
ran GTP-Binding Protein - genetics
Receptor Activity-Modifying Protein 3 - genetics
TATA-Binding Protein Associated Factors - genetics
Transcription Factor TFIID - genetics
title A Hepatocellular Carcinoma 5-Gene Score Associated With Survival of Patients After Liver Resection
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