Deciphering the kinetic mechanisms controlling selected plant ADP-glucose pyrophosphorylases
•AGPase, a rate-limiting enzyme in starch biosynthesis, is highly regulated.•With 3-PGA, each AGPase followed a Theorell-Chance Bi Bi mechanism.•3-PGA affects binding of substrates, kcat or both, depending on the isoform.•Without 3-PGA one isoform changes from a Theorell-Chance Bi Bi to a rapid equi...
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description | •AGPase, a rate-limiting enzyme in starch biosynthesis, is highly regulated.•With 3-PGA, each AGPase followed a Theorell-Chance Bi Bi mechanism.•3-PGA affects binding of substrates, kcat or both, depending on the isoform.•Without 3-PGA one isoform changes from a Theorell-Chance Bi Bi to a rapid equilibrium mechanism.•An unusual phenomena of product activation is also seen in the absence of 3-PGA.
ADP-Glc pyrophosphorylase (AGPase), a rate-limiting enzyme in starch biosynthesis, is controlled by thermostability and allosteric regulation. Previous studies suggested that redox affects turnover number and heat stability of AGPases. Here, we investigated how allostery and redox state affect kinetic mechanisms of the reduced, heat labile and the oxidized, heat stable potato tuber enzymes; the heat labile maize endosperm enzyme and a chimeric maize/potato heat stable enzyme that lacks the cysteine responsible for redox changes. With 3-PGA, all AGPases followed a Theorell-Chance Bi Bi mechanism with ATP binding first and ADP-Glc releasing last. 3-PGA increases the binding affinity for both substrates with little effect on velocity for the maize and MP isoforms. By contrast, 3-PGA increases the velocity and the affinity for G-1-P for the potato enzymes. Redox state does not affect kcat of the two potato isoforms. Without 3-PGA the oxidized potato enzyme exhibits a rapid equilibrium random Bi Bi mechanism with a dead end ternary complex. This fundamental change from rapid, ordered binding with little buildup of intermediates to a mechanism featuring relatively slow, random binding is unique to the oxidized potato tuber enzyme. Finally, ADP-Glc the physiologically relevant product of this enzyme has complex, isoform-specific effects on catalysis. |
doi_str_mv | 10.1016/j.abb.2013.04.003 |
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ADP-Glc pyrophosphorylase (AGPase), a rate-limiting enzyme in starch biosynthesis, is controlled by thermostability and allosteric regulation. Previous studies suggested that redox affects turnover number and heat stability of AGPases. Here, we investigated how allostery and redox state affect kinetic mechanisms of the reduced, heat labile and the oxidized, heat stable potato tuber enzymes; the heat labile maize endosperm enzyme and a chimeric maize/potato heat stable enzyme that lacks the cysteine responsible for redox changes. With 3-PGA, all AGPases followed a Theorell-Chance Bi Bi mechanism with ATP binding first and ADP-Glc releasing last. 3-PGA increases the binding affinity for both substrates with little effect on velocity for the maize and MP isoforms. By contrast, 3-PGA increases the velocity and the affinity for G-1-P for the potato enzymes. Redox state does not affect kcat of the two potato isoforms. Without 3-PGA the oxidized potato enzyme exhibits a rapid equilibrium random Bi Bi mechanism with a dead end ternary complex. This fundamental change from rapid, ordered binding with little buildup of intermediates to a mechanism featuring relatively slow, random binding is unique to the oxidized potato tuber enzyme. Finally, ADP-Glc the physiologically relevant product of this enzyme has complex, isoform-specific effects on catalysis.</description><identifier>ISSN: 0003-9861</identifier><identifier>EISSN: 1096-0384</identifier><identifier>DOI: 10.1016/j.abb.2013.04.003</identifier><identifier>PMID: 23603314</identifier><language>eng</language><publisher>United States: Elsevier Inc</publisher><subject>adenosine triphosphate ; ADP-glucose pyrophosphorylase ; Allosteric Regulation ; binding capacity ; biosynthesis ; catalytic activity ; chimerism ; corn ; cysteine ; endosperm ; Endosperm - enzymology ; Enzyme Activation ; Enzyme Activators - chemistry ; Enzyme kinetics ; Enzyme Stability ; enzymes ; Glucose-1-Phosphate Adenylyltransferase - chemistry ; Glucose-1-Phosphate Adenylyltransferase - genetics ; Glyceric Acids - chemistry ; heat ; heat stability ; Hot Temperature ; Kinetics ; Maize ; Mechanism ; Oxidation-Reduction ; Phosphates - chemistry ; Plant Proteins - chemistry ; Plant Proteins - genetics ; Plant Tubers - enzymology ; potatoes ; Protein Subunits - chemistry ; Recombinant Fusion Proteins - chemistry ; Recombinant Fusion Proteins - genetics ; Solanum tuberosum - enzymology ; starch ; Zea mays - enzymology</subject><ispartof>Archives of biochemistry and biophysics, 2013-07, Vol.535 (2), p.215-226</ispartof><rights>2013 Elsevier Inc.</rights><rights>Copyright © 2013 Elsevier Inc. All rights reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c377t-49b9d4cf3bb8ec52119c58e0c46c6aabf8a51f2b689b7f6bb9f40df3e247414f3</citedby><cites>FETCH-LOGICAL-c377t-49b9d4cf3bb8ec52119c58e0c46c6aabf8a51f2b689b7f6bb9f40df3e247414f3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1016/j.abb.2013.04.003$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,777,781,3537,27905,27906,45976</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/23603314$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Boehlein, Susan K.</creatorcontrib><creatorcontrib>Shaw, Janine R.</creatorcontrib><creatorcontrib>Hwang, Seon K.</creatorcontrib><creatorcontrib>Stewart, Jon D.</creatorcontrib><creatorcontrib>Curtis Hannah, L.</creatorcontrib><title>Deciphering the kinetic mechanisms controlling selected plant ADP-glucose pyrophosphorylases</title><title>Archives of biochemistry and biophysics</title><addtitle>Arch Biochem Biophys</addtitle><description>•AGPase, a rate-limiting enzyme in starch biosynthesis, is highly regulated.•With 3-PGA, each AGPase followed a Theorell-Chance Bi Bi mechanism.•3-PGA affects binding of substrates, kcat or both, depending on the isoform.•Without 3-PGA one isoform changes from a Theorell-Chance Bi Bi to a rapid equilibrium mechanism.•An unusual phenomena of product activation is also seen in the absence of 3-PGA.
ADP-Glc pyrophosphorylase (AGPase), a rate-limiting enzyme in starch biosynthesis, is controlled by thermostability and allosteric regulation. Previous studies suggested that redox affects turnover number and heat stability of AGPases. Here, we investigated how allostery and redox state affect kinetic mechanisms of the reduced, heat labile and the oxidized, heat stable potato tuber enzymes; the heat labile maize endosperm enzyme and a chimeric maize/potato heat stable enzyme that lacks the cysteine responsible for redox changes. With 3-PGA, all AGPases followed a Theorell-Chance Bi Bi mechanism with ATP binding first and ADP-Glc releasing last. 3-PGA increases the binding affinity for both substrates with little effect on velocity for the maize and MP isoforms. By contrast, 3-PGA increases the velocity and the affinity for G-1-P for the potato enzymes. Redox state does not affect kcat of the two potato isoforms. Without 3-PGA the oxidized potato enzyme exhibits a rapid equilibrium random Bi Bi mechanism with a dead end ternary complex. This fundamental change from rapid, ordered binding with little buildup of intermediates to a mechanism featuring relatively slow, random binding is unique to the oxidized potato tuber enzyme. Finally, ADP-Glc the physiologically relevant product of this enzyme has complex, isoform-specific effects on catalysis.</description><subject>adenosine triphosphate</subject><subject>ADP-glucose pyrophosphorylase</subject><subject>Allosteric Regulation</subject><subject>binding capacity</subject><subject>biosynthesis</subject><subject>catalytic activity</subject><subject>chimerism</subject><subject>corn</subject><subject>cysteine</subject><subject>endosperm</subject><subject>Endosperm - enzymology</subject><subject>Enzyme Activation</subject><subject>Enzyme Activators - chemistry</subject><subject>Enzyme kinetics</subject><subject>Enzyme Stability</subject><subject>enzymes</subject><subject>Glucose-1-Phosphate Adenylyltransferase - chemistry</subject><subject>Glucose-1-Phosphate Adenylyltransferase - genetics</subject><subject>Glyceric Acids - chemistry</subject><subject>heat</subject><subject>heat stability</subject><subject>Hot Temperature</subject><subject>Kinetics</subject><subject>Maize</subject><subject>Mechanism</subject><subject>Oxidation-Reduction</subject><subject>Phosphates - chemistry</subject><subject>Plant Proteins - chemistry</subject><subject>Plant Proteins - genetics</subject><subject>Plant Tubers - enzymology</subject><subject>potatoes</subject><subject>Protein Subunits - chemistry</subject><subject>Recombinant Fusion Proteins - chemistry</subject><subject>Recombinant Fusion Proteins - genetics</subject><subject>Solanum tuberosum - enzymology</subject><subject>starch</subject><subject>Zea mays - enzymology</subject><issn>0003-9861</issn><issn>1096-0384</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2013</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp9kE2P0zAQhi0EYkvhB3CBHLkkjGPHScRptcuXtBJIsDcky3bGrUsSB0-K1H-Pqy4cOYxGGj3vq9HD2EsOFQeu3h4qY21VAxcVyApAPGIbDr0qQXTyMdtAPpV9p_gVe0Z0AOBcqvopu6qFAiG43LAft-jCsscU5l2x7rH4GWZcgysmdHszB5qocHFeUxzHM0I4oltxKJbRzGtxffu13I1HFwmL5ZTiso-UJ51GQ0jP2RNvRsIXD3vL7j-8_37zqbz78vHzzfVd6UTbrqXsbT9I54W1Hbqm5rx3TYfgpHLKGOs703BfW9X1tvXK2t5LGLzAWraSSy-27M2ld0nx1xFp1VMgh2N-EeORNBeq7bqmzjq2jF9QlyJRQq-XFCaTTpqDPkvVB52l6rNUDVLnSM68eqg_2gmHf4m_FjPw-gJ4E7XZpUD6_ltuaABq3ih5Jt5dCMwafgdMmlzA2eEQUvaphxj-88AfLBCSUg</recordid><startdate>20130715</startdate><enddate>20130715</enddate><creator>Boehlein, Susan K.</creator><creator>Shaw, Janine R.</creator><creator>Hwang, Seon K.</creator><creator>Stewart, Jon D.</creator><creator>Curtis Hannah, L.</creator><general>Elsevier Inc</general><scope>FBQ</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>20130715</creationdate><title>Deciphering the kinetic mechanisms controlling selected plant ADP-glucose pyrophosphorylases</title><author>Boehlein, Susan K. ; Shaw, Janine R. ; Hwang, Seon K. ; Stewart, Jon D. ; Curtis Hannah, L.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c377t-49b9d4cf3bb8ec52119c58e0c46c6aabf8a51f2b689b7f6bb9f40df3e247414f3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2013</creationdate><topic>adenosine triphosphate</topic><topic>ADP-glucose pyrophosphorylase</topic><topic>Allosteric Regulation</topic><topic>binding capacity</topic><topic>biosynthesis</topic><topic>catalytic activity</topic><topic>chimerism</topic><topic>corn</topic><topic>cysteine</topic><topic>endosperm</topic><topic>Endosperm - enzymology</topic><topic>Enzyme Activation</topic><topic>Enzyme Activators - chemistry</topic><topic>Enzyme kinetics</topic><topic>Enzyme Stability</topic><topic>enzymes</topic><topic>Glucose-1-Phosphate Adenylyltransferase - chemistry</topic><topic>Glucose-1-Phosphate Adenylyltransferase - genetics</topic><topic>Glyceric Acids - chemistry</topic><topic>heat</topic><topic>heat stability</topic><topic>Hot Temperature</topic><topic>Kinetics</topic><topic>Maize</topic><topic>Mechanism</topic><topic>Oxidation-Reduction</topic><topic>Phosphates - chemistry</topic><topic>Plant Proteins - chemistry</topic><topic>Plant Proteins - genetics</topic><topic>Plant Tubers - enzymology</topic><topic>potatoes</topic><topic>Protein Subunits - chemistry</topic><topic>Recombinant Fusion Proteins - chemistry</topic><topic>Recombinant Fusion Proteins - genetics</topic><topic>Solanum tuberosum - enzymology</topic><topic>starch</topic><topic>Zea mays - enzymology</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Boehlein, Susan K.</creatorcontrib><creatorcontrib>Shaw, Janine R.</creatorcontrib><creatorcontrib>Hwang, Seon K.</creatorcontrib><creatorcontrib>Stewart, Jon D.</creatorcontrib><creatorcontrib>Curtis Hannah, L.</creatorcontrib><collection>AGRIS</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Archives of biochemistry and biophysics</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Boehlein, Susan K.</au><au>Shaw, Janine R.</au><au>Hwang, Seon K.</au><au>Stewart, Jon D.</au><au>Curtis Hannah, L.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Deciphering the kinetic mechanisms controlling selected plant ADP-glucose pyrophosphorylases</atitle><jtitle>Archives of biochemistry and biophysics</jtitle><addtitle>Arch Biochem Biophys</addtitle><date>2013-07-15</date><risdate>2013</risdate><volume>535</volume><issue>2</issue><spage>215</spage><epage>226</epage><pages>215-226</pages><issn>0003-9861</issn><eissn>1096-0384</eissn><abstract>•AGPase, a rate-limiting enzyme in starch biosynthesis, is highly regulated.•With 3-PGA, each AGPase followed a Theorell-Chance Bi Bi mechanism.•3-PGA affects binding of substrates, kcat or both, depending on the isoform.•Without 3-PGA one isoform changes from a Theorell-Chance Bi Bi to a rapid equilibrium mechanism.•An unusual phenomena of product activation is also seen in the absence of 3-PGA.
ADP-Glc pyrophosphorylase (AGPase), a rate-limiting enzyme in starch biosynthesis, is controlled by thermostability and allosteric regulation. Previous studies suggested that redox affects turnover number and heat stability of AGPases. Here, we investigated how allostery and redox state affect kinetic mechanisms of the reduced, heat labile and the oxidized, heat stable potato tuber enzymes; the heat labile maize endosperm enzyme and a chimeric maize/potato heat stable enzyme that lacks the cysteine responsible for redox changes. With 3-PGA, all AGPases followed a Theorell-Chance Bi Bi mechanism with ATP binding first and ADP-Glc releasing last. 3-PGA increases the binding affinity for both substrates with little effect on velocity for the maize and MP isoforms. By contrast, 3-PGA increases the velocity and the affinity for G-1-P for the potato enzymes. Redox state does not affect kcat of the two potato isoforms. Without 3-PGA the oxidized potato enzyme exhibits a rapid equilibrium random Bi Bi mechanism with a dead end ternary complex. This fundamental change from rapid, ordered binding with little buildup of intermediates to a mechanism featuring relatively slow, random binding is unique to the oxidized potato tuber enzyme. Finally, ADP-Glc the physiologically relevant product of this enzyme has complex, isoform-specific effects on catalysis.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>23603314</pmid><doi>10.1016/j.abb.2013.04.003</doi><tpages>12</tpages></addata></record> |
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subjects | adenosine triphosphate ADP-glucose pyrophosphorylase Allosteric Regulation binding capacity biosynthesis catalytic activity chimerism corn cysteine endosperm Endosperm - enzymology Enzyme Activation Enzyme Activators - chemistry Enzyme kinetics Enzyme Stability enzymes Glucose-1-Phosphate Adenylyltransferase - chemistry Glucose-1-Phosphate Adenylyltransferase - genetics Glyceric Acids - chemistry heat heat stability Hot Temperature Kinetics Maize Mechanism Oxidation-Reduction Phosphates - chemistry Plant Proteins - chemistry Plant Proteins - genetics Plant Tubers - enzymology potatoes Protein Subunits - chemistry Recombinant Fusion Proteins - chemistry Recombinant Fusion Proteins - genetics Solanum tuberosum - enzymology starch Zea mays - enzymology |
title | Deciphering the kinetic mechanisms controlling selected plant ADP-glucose pyrophosphorylases |
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