Aeromonas australiensis sp. nov., isolated from irrigation water
A Gram-negative, facultatively anaerobic bacillus, designated strain 266T, was isolated from an irrigation water system in the south-west of Western Australia. Analysis of the 16S rRNA gene sequence confirmed that strain 266T belonged to the genus Aeromonas, with the nearest species being Aeromonas...
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| Veröffentlicht in: | International journal of systematic and evolutionary microbiology 2013-06, Vol.63 (Pt 6), p.2270-2276 |
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| container_title | International journal of systematic and evolutionary microbiology |
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| creator | Aravena-Román, Max Beaz-Hidalgo, Roxana Inglis, Timothy J. J Riley, Thomas V Martínez-Murcia, Antonio J Chang, Barbara J Figueras, Maria Jose |
| description | A Gram-negative, facultatively anaerobic bacillus, designated strain 266T, was isolated from an irrigation water system in the south-west of Western Australia. Analysis of the 16S rRNA gene sequence confirmed that strain 266T belonged to the genus Aeromonas, with the nearest species being Aeromonas fluvialis (99.6 % similarity to the type strain, with 6 nucleotide differences) followed by Aeromonas veronii and Aeromonas allosaccharophila (both 99.5 %). Analysis of gyrB and rpoD sequences suggested that strain 266T formed a phylogenetic line independent of other species in the genus. This was confirmed using the concatenated sequences of six housekeeping genes (gyrB, rpoD, recA, dnaJ, gyrA and dnaX) that also indicated that A. veronii and A. allosaccharophila were the nearest relatives. DNA–DNA reassociation experiments and phenotypic analysis further supported the conclusion that strain 266T represents a novel species, for which the name Aeromonas australiensis sp. nov. is proposed, with type strain 266T ( = CECT 8023T = LMG 2670T). |
| doi_str_mv | 10.1099/ijs.0.040162-0 |
| format | Article |
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J ; Riley, Thomas V ; Martínez-Murcia, Antonio J ; Chang, Barbara J ; Figueras, Maria Jose</creator><creatorcontrib>Aravena-Román, Max ; Beaz-Hidalgo, Roxana ; Inglis, Timothy J. J ; Riley, Thomas V ; Martínez-Murcia, Antonio J ; Chang, Barbara J ; Figueras, Maria Jose</creatorcontrib><description>A Gram-negative, facultatively anaerobic bacillus, designated strain 266T, was isolated from an irrigation water system in the south-west of Western Australia. Analysis of the 16S rRNA gene sequence confirmed that strain 266T belonged to the genus Aeromonas, with the nearest species being Aeromonas fluvialis (99.6 % similarity to the type strain, with 6 nucleotide differences) followed by Aeromonas veronii and Aeromonas allosaccharophila (both 99.5 %). Analysis of gyrB and rpoD sequences suggested that strain 266T formed a phylogenetic line independent of other species in the genus. This was confirmed using the concatenated sequences of six housekeeping genes (gyrB, rpoD, recA, dnaJ, gyrA and dnaX) that also indicated that A. veronii and A. allosaccharophila were the nearest relatives. DNA–DNA reassociation experiments and phenotypic analysis further supported the conclusion that strain 266T represents a novel species, for which the name Aeromonas australiensis sp. nov. is proposed, with type strain 266T ( = CECT 8023T = LMG 2670T).</description><identifier>ISSN: 1466-5034</identifier><identifier>ISSN: 1466-5026</identifier><identifier>EISSN: 1466-5034</identifier><identifier>DOI: 10.1099/ijs.0.040162-0</identifier><identifier>PMID: 23159749</identifier><language>eng</language><publisher>England: International Union of Microbiological Societies</publisher><subject>Aeromonas - classification ; Aeromonas - genetics ; Aeromonas - isolation & purification ; Aeromonas allosaccharophila ; Aeromonas veronii ; Agricultural Irrigation ; Bacterial Typing Techniques ; DNA, Bacterial - genetics ; essential genes ; Fatty Acids - analysis ; Genes, Bacterial ; irrigation water ; microbiology ; Molecular Sequence Data ; Nucleic Acid Hybridization ; nucleotide sequences ; Phylogeny ; ribosomal RNA ; RNA, Ribosomal, 16S - genetics ; Sequence Analysis, DNA ; Water Microbiology ; Western Australia</subject><ispartof>International journal of systematic and evolutionary microbiology, 2013-06, Vol.63 (Pt 6), p.2270-2276</ispartof><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c425t-2be6b542ce28acb5e1ae2c8637d93ae6c4142e71ca99aae3c837d755a6bd4ef33</citedby><cites>FETCH-LOGICAL-c425t-2be6b542ce28acb5e1ae2c8637d93ae6c4142e71ca99aae3c837d755a6bd4ef33</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,3733,27901,27902</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/23159749$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Aravena-Román, Max</creatorcontrib><creatorcontrib>Beaz-Hidalgo, Roxana</creatorcontrib><creatorcontrib>Inglis, Timothy J. J</creatorcontrib><creatorcontrib>Riley, Thomas V</creatorcontrib><creatorcontrib>Martínez-Murcia, Antonio J</creatorcontrib><creatorcontrib>Chang, Barbara J</creatorcontrib><creatorcontrib>Figueras, Maria Jose</creatorcontrib><title>Aeromonas australiensis sp. nov., isolated from irrigation water</title><title>International journal of systematic and evolutionary microbiology</title><addtitle>Int J Syst Evol Microbiol</addtitle><description>A Gram-negative, facultatively anaerobic bacillus, designated strain 266T, was isolated from an irrigation water system in the south-west of Western Australia. Analysis of the 16S rRNA gene sequence confirmed that strain 266T belonged to the genus Aeromonas, with the nearest species being Aeromonas fluvialis (99.6 % similarity to the type strain, with 6 nucleotide differences) followed by Aeromonas veronii and Aeromonas allosaccharophila (both 99.5 %). Analysis of gyrB and rpoD sequences suggested that strain 266T formed a phylogenetic line independent of other species in the genus. This was confirmed using the concatenated sequences of six housekeeping genes (gyrB, rpoD, recA, dnaJ, gyrA and dnaX) that also indicated that A. veronii and A. allosaccharophila were the nearest relatives. DNA–DNA reassociation experiments and phenotypic analysis further supported the conclusion that strain 266T represents a novel species, for which the name Aeromonas australiensis sp. nov. is proposed, with type strain 266T ( = CECT 8023T = LMG 2670T).</description><subject>Aeromonas - classification</subject><subject>Aeromonas - genetics</subject><subject>Aeromonas - isolation & purification</subject><subject>Aeromonas allosaccharophila</subject><subject>Aeromonas veronii</subject><subject>Agricultural Irrigation</subject><subject>Bacterial Typing Techniques</subject><subject>DNA, Bacterial - genetics</subject><subject>essential genes</subject><subject>Fatty Acids - analysis</subject><subject>Genes, Bacterial</subject><subject>irrigation water</subject><subject>microbiology</subject><subject>Molecular Sequence Data</subject><subject>Nucleic Acid Hybridization</subject><subject>nucleotide sequences</subject><subject>Phylogeny</subject><subject>ribosomal RNA</subject><subject>RNA, Ribosomal, 16S - genetics</subject><subject>Sequence Analysis, DNA</subject><subject>Water Microbiology</subject><subject>Western Australia</subject><issn>1466-5034</issn><issn>1466-5026</issn><issn>1466-5034</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2013</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNpNkD1PwzAQhi0EoqWwMkJGBhL8nXqjqviSKjFAZ-viXipXaVzsFMS_J1ULYrrTe8-9w0PIJaMFo8bc-VUqaEElZZrn9IgMmdQ6V1TI43_7gJyltKK0Dyg9JQMumDKlNENyP8EY1qGFlME2dREaj23yKUubImvDZ3Gb-RQa6HCR1T2Z-Rj9Ejof2uyrT-M5OamhSXhxmCMyf3x4nz7ns9enl-lkljvJVZfzCnWlJHfIx-AqhQyQu7EW5cIIQO0kkxxL5sAYABRu3F9KpUBXC4m1ECNys-_dxPCxxdTZtU8OmwZaDNtkmdBalSXXO7TYoy6GlCLWdhP9GuK3ZdTurNnemqV2b83S_uHq0L2t1rj4w3819cD1HqghWFhGn-z8jVOmdkqFMWPxAwtIce8</recordid><startdate>20130601</startdate><enddate>20130601</enddate><creator>Aravena-Román, Max</creator><creator>Beaz-Hidalgo, Roxana</creator><creator>Inglis, Timothy J. J</creator><creator>Riley, Thomas V</creator><creator>Martínez-Murcia, Antonio J</creator><creator>Chang, Barbara J</creator><creator>Figueras, Maria Jose</creator><general>International Union of Microbiological Societies</general><scope>FBQ</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>20130601</creationdate><title>Aeromonas australiensis sp. nov., isolated from irrigation water</title><author>Aravena-Román, Max ; Beaz-Hidalgo, Roxana ; Inglis, Timothy J. J ; Riley, Thomas V ; Martínez-Murcia, Antonio J ; Chang, Barbara J ; Figueras, Maria Jose</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c425t-2be6b542ce28acb5e1ae2c8637d93ae6c4142e71ca99aae3c837d755a6bd4ef33</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2013</creationdate><topic>Aeromonas - classification</topic><topic>Aeromonas - genetics</topic><topic>Aeromonas - isolation & purification</topic><topic>Aeromonas allosaccharophila</topic><topic>Aeromonas veronii</topic><topic>Agricultural Irrigation</topic><topic>Bacterial Typing Techniques</topic><topic>DNA, Bacterial - genetics</topic><topic>essential genes</topic><topic>Fatty Acids - analysis</topic><topic>Genes, Bacterial</topic><topic>irrigation water</topic><topic>microbiology</topic><topic>Molecular Sequence Data</topic><topic>Nucleic Acid Hybridization</topic><topic>nucleotide sequences</topic><topic>Phylogeny</topic><topic>ribosomal RNA</topic><topic>RNA, Ribosomal, 16S - genetics</topic><topic>Sequence Analysis, DNA</topic><topic>Water Microbiology</topic><topic>Western Australia</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Aravena-Román, Max</creatorcontrib><creatorcontrib>Beaz-Hidalgo, Roxana</creatorcontrib><creatorcontrib>Inglis, Timothy J. J</creatorcontrib><creatorcontrib>Riley, Thomas V</creatorcontrib><creatorcontrib>Martínez-Murcia, Antonio J</creatorcontrib><creatorcontrib>Chang, Barbara J</creatorcontrib><creatorcontrib>Figueras, Maria Jose</creatorcontrib><collection>AGRIS</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>International journal of systematic and evolutionary microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Aravena-Román, Max</au><au>Beaz-Hidalgo, Roxana</au><au>Inglis, Timothy J. J</au><au>Riley, Thomas V</au><au>Martínez-Murcia, Antonio J</au><au>Chang, Barbara J</au><au>Figueras, Maria Jose</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Aeromonas australiensis sp. nov., isolated from irrigation water</atitle><jtitle>International journal of systematic and evolutionary microbiology</jtitle><addtitle>Int J Syst Evol Microbiol</addtitle><date>2013-06-01</date><risdate>2013</risdate><volume>63</volume><issue>Pt 6</issue><spage>2270</spage><epage>2276</epage><pages>2270-2276</pages><issn>1466-5034</issn><issn>1466-5026</issn><eissn>1466-5034</eissn><abstract>A Gram-negative, facultatively anaerobic bacillus, designated strain 266T, was isolated from an irrigation water system in the south-west of Western Australia. Analysis of the 16S rRNA gene sequence confirmed that strain 266T belonged to the genus Aeromonas, with the nearest species being Aeromonas fluvialis (99.6 % similarity to the type strain, with 6 nucleotide differences) followed by Aeromonas veronii and Aeromonas allosaccharophila (both 99.5 %). Analysis of gyrB and rpoD sequences suggested that strain 266T formed a phylogenetic line independent of other species in the genus. This was confirmed using the concatenated sequences of six housekeeping genes (gyrB, rpoD, recA, dnaJ, gyrA and dnaX) that also indicated that A. veronii and A. allosaccharophila were the nearest relatives. DNA–DNA reassociation experiments and phenotypic analysis further supported the conclusion that strain 266T represents a novel species, for which the name Aeromonas australiensis sp. nov. is proposed, with type strain 266T ( = CECT 8023T = LMG 2670T).</abstract><cop>England</cop><pub>International Union of Microbiological Societies</pub><pmid>23159749</pmid><doi>10.1099/ijs.0.040162-0</doi><tpages>7</tpages><oa>free_for_read</oa></addata></record> |
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| source | MEDLINE; Microbiology Society; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; Alma/SFX Local Collection |
| subjects | Aeromonas - classification Aeromonas - genetics Aeromonas - isolation & purification Aeromonas allosaccharophila Aeromonas veronii Agricultural Irrigation Bacterial Typing Techniques DNA, Bacterial - genetics essential genes Fatty Acids - analysis Genes, Bacterial irrigation water microbiology Molecular Sequence Data Nucleic Acid Hybridization nucleotide sequences Phylogeny ribosomal RNA RNA, Ribosomal, 16S - genetics Sequence Analysis, DNA Water Microbiology Western Australia |
| title | Aeromonas australiensis sp. nov., isolated from irrigation water |
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