Technical note: updating the inverse of the genomic relationship matrix

A computing strategy to update the inverse of the genomic relationship matrix when new genotypes become available is described. It is shown that re-using results of previous computations can result in substantial reductions in computing time required. For instance, when the number of individuals inc...

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Veröffentlicht in:Journal of animal science 2013-06, Vol.91 (6), p.2583-2586
Hauptverfasser: Meyer, K, Tier, B, Graser, H-U
Format: Artikel
Sprache:eng
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Zusammenfassung:A computing strategy to update the inverse of the genomic relationship matrix when new genotypes become available is described. It is shown that re-using results of previous computations can result in substantial reductions in computing time required. For instance, when the number of individuals increased by about 1% for matrices larger than 15,000, the time required for updating was less than 7% of that used for direct inversion from scratch.
ISSN:1525-3163
DOI:10.2527/jas.2012-6056