Three-dimensional interactive and stereotactic atlas of head muscles and glands correlated with cranial nerves and surface and sectional neuroanatomy
► A 3D interactive atlas of the head muscles and glands was created from 3T. ► Methods and tools used to construct this stereotactic atlas are described. ► The atlas is correlated with cranial nerves and surface and sectional neuroanatomy. ► This atlas is useful in education, research, and clinical...
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| Veröffentlicht in: | Journal of neuroscience methods 2013-04, Vol.215 (1), p.12-18 |
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| creator | Nowinski, Wieslaw L. Chua, Beng Choon Johnson, Aleksandra Qian, Guoyu Poh, Lan Eng Yi, Su Hnin Wut Bivi, Aminah Nowinska, Natalia G. |
| description | ► A 3D interactive atlas of the head muscles and glands was created from 3T. ► Methods and tools used to construct this stereotactic atlas are described. ► The atlas is correlated with cranial nerves and surface and sectional neuroanatomy. ► This atlas is useful in education, research, and clinical applications.
Three-dimensional (3D) relationships between head muscles and cranial nerves innervating them are complicated. Existing sources present these relationships in illustrations, radiologic scans, or autopsy photographs, which are limited for learning and use. Developed electronic atlases are limited in content, quality, functionality, and/or presentation. We create a truly 3D interactive, stereotactic and high quality atlas, which provides spatial relationships among head muscles, glands and cranial nerves, and correlates them to surface and sectional neuroanatomy.
The head muscles and glands were created from a 3T scan by contouring them and generating 3D models. They were named and structured according to Terminologia anatomica. The muscles were divided into: extra-ocular, facial, masticatory and other muscles, and glands into mouth and other glands. The muscles, glands (and also head) were placed in a stereotactic coordinate system. This content was integrated with cranial nerves and neuroanatomy created earlier.
To explore this complex content, a scalable user interface was designed with 12 modules including central nervous system (cerebrum, cerebellum, brainstem, spinal cord), cranial nerves, muscles, glands, arterial system, venous system, tracts, deep gray nuclei, ventricles, white matter, visual system, head. Anatomy exploration operations include compositing/decompositing, individual/group selection, 3D view-index mapping, 3D labeling, highlighting, distance measuring, 3D brain cutting, and axial/coronal/sagittal triplanar display.
To our best knowledge, this is the first truly 3D, stereotactic, interactive, fairly complete atlas of head muscles, and the first attempt to create a 3D stereotactic atlas of glands. Its use ranges from education of students and patients to research to potential clinical applications. |
| doi_str_mv | 10.1016/j.jneumeth.2013.02.005 |
| format | Article |
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Three-dimensional (3D) relationships between head muscles and cranial nerves innervating them are complicated. Existing sources present these relationships in illustrations, radiologic scans, or autopsy photographs, which are limited for learning and use. Developed electronic atlases are limited in content, quality, functionality, and/or presentation. We create a truly 3D interactive, stereotactic and high quality atlas, which provides spatial relationships among head muscles, glands and cranial nerves, and correlates them to surface and sectional neuroanatomy.
The head muscles and glands were created from a 3T scan by contouring them and generating 3D models. They were named and structured according to Terminologia anatomica. The muscles were divided into: extra-ocular, facial, masticatory and other muscles, and glands into mouth and other glands. The muscles, glands (and also head) were placed in a stereotactic coordinate system. This content was integrated with cranial nerves and neuroanatomy created earlier.
To explore this complex content, a scalable user interface was designed with 12 modules including central nervous system (cerebrum, cerebellum, brainstem, spinal cord), cranial nerves, muscles, glands, arterial system, venous system, tracts, deep gray nuclei, ventricles, white matter, visual system, head. Anatomy exploration operations include compositing/decompositing, individual/group selection, 3D view-index mapping, 3D labeling, highlighting, distance measuring, 3D brain cutting, and axial/coronal/sagittal triplanar display.
To our best knowledge, this is the first truly 3D, stereotactic, interactive, fairly complete atlas of head muscles, and the first attempt to create a 3D stereotactic atlas of glands. Its use ranges from education of students and patients to research to potential clinical applications.</description><identifier>ISSN: 0165-0270</identifier><identifier>EISSN: 1872-678X</identifier><identifier>DOI: 10.1016/j.jneumeth.2013.02.005</identifier><identifier>PMID: 23416136</identifier><language>eng</language><publisher>Netherlands: Elsevier B.V</publisher><subject><![CDATA[Anatomy ; Atlases as Topic ; Brain atlas ; Cranial nerves ; Cranial Nerves - anatomy & histology ; Echo-Planar Imaging ; Facial Muscles - anatomy & histology ; Glands ; Head - anatomy & histology ; Head muscles ; Humans ; Imaging, Three-Dimensional ; Lacrimal Apparatus - anatomy & histology ; Masticatory Muscles - anatomy & histology ; Muscle, Skeletal - anatomy & histology ; Neuroanatomy ; Neuroanatomy - methods ; Salivary Glands - anatomy & histology ; Stereotaxic Techniques]]></subject><ispartof>Journal of neuroscience methods, 2013-04, Vol.215 (1), p.12-18</ispartof><rights>2013</rights><rights>Crown Copyright © 2013. Published by Elsevier B.V. All rights reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c401t-b1901ed86fe95add40379c88198239e6b1045e917743ef0313c2736590982f3c3</citedby><cites>FETCH-LOGICAL-c401t-b1901ed86fe95add40379c88198239e6b1045e917743ef0313c2736590982f3c3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S016502701300071X$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,776,780,3537,27901,27902,65306</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/23416136$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Nowinski, Wieslaw L.</creatorcontrib><creatorcontrib>Chua, Beng Choon</creatorcontrib><creatorcontrib>Johnson, Aleksandra</creatorcontrib><creatorcontrib>Qian, Guoyu</creatorcontrib><creatorcontrib>Poh, Lan Eng</creatorcontrib><creatorcontrib>Yi, Su Hnin Wut</creatorcontrib><creatorcontrib>Bivi, Aminah</creatorcontrib><creatorcontrib>Nowinska, Natalia G.</creatorcontrib><title>Three-dimensional interactive and stereotactic atlas of head muscles and glands correlated with cranial nerves and surface and sectional neuroanatomy</title><title>Journal of neuroscience methods</title><addtitle>J Neurosci Methods</addtitle><description>► A 3D interactive atlas of the head muscles and glands was created from 3T. ► Methods and tools used to construct this stereotactic atlas are described. ► The atlas is correlated with cranial nerves and surface and sectional neuroanatomy. ► This atlas is useful in education, research, and clinical applications.
Three-dimensional (3D) relationships between head muscles and cranial nerves innervating them are complicated. Existing sources present these relationships in illustrations, radiologic scans, or autopsy photographs, which are limited for learning and use. Developed electronic atlases are limited in content, quality, functionality, and/or presentation. We create a truly 3D interactive, stereotactic and high quality atlas, which provides spatial relationships among head muscles, glands and cranial nerves, and correlates them to surface and sectional neuroanatomy.
The head muscles and glands were created from a 3T scan by contouring them and generating 3D models. They were named and structured according to Terminologia anatomica. The muscles were divided into: extra-ocular, facial, masticatory and other muscles, and glands into mouth and other glands. The muscles, glands (and also head) were placed in a stereotactic coordinate system. This content was integrated with cranial nerves and neuroanatomy created earlier.
To explore this complex content, a scalable user interface was designed with 12 modules including central nervous system (cerebrum, cerebellum, brainstem, spinal cord), cranial nerves, muscles, glands, arterial system, venous system, tracts, deep gray nuclei, ventricles, white matter, visual system, head. Anatomy exploration operations include compositing/decompositing, individual/group selection, 3D view-index mapping, 3D labeling, highlighting, distance measuring, 3D brain cutting, and axial/coronal/sagittal triplanar display.
To our best knowledge, this is the first truly 3D, stereotactic, interactive, fairly complete atlas of head muscles, and the first attempt to create a 3D stereotactic atlas of glands. Its use ranges from education of students and patients to research to potential clinical applications.</description><subject>Anatomy</subject><subject>Atlases as Topic</subject><subject>Brain atlas</subject><subject>Cranial nerves</subject><subject>Cranial Nerves - anatomy & histology</subject><subject>Echo-Planar Imaging</subject><subject>Facial Muscles - anatomy & histology</subject><subject>Glands</subject><subject>Head - anatomy & histology</subject><subject>Head muscles</subject><subject>Humans</subject><subject>Imaging, Three-Dimensional</subject><subject>Lacrimal Apparatus - anatomy & histology</subject><subject>Masticatory Muscles - anatomy & histology</subject><subject>Muscle, Skeletal - anatomy & histology</subject><subject>Neuroanatomy</subject><subject>Neuroanatomy - methods</subject><subject>Salivary Glands - anatomy & histology</subject><subject>Stereotaxic Techniques</subject><issn>0165-0270</issn><issn>1872-678X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2013</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqNkcGOFCEURYnROO3oL0xYuqnyAVVQtdNMHDWZxM2YuCM0vLLpVMEIVJv5EP9XerrHrW4gkPPuzbuXkCsGLQMm3-3bfcB1wbJrOTDRAm8B-mdkwwbFG6mG78_JpoJ9A1zBBXmV8x4AuhHkS3LBRcckE3JDft_tEmLj_IIh-xjMTH0omIwt_oDUBEdzfWIsxx9LTZlNpnGiOzSOLmu2M-ZH7Mdcz0xtTAlnU9DRX77sqE0m-KoaMB3OZF7TZOxZHKvso21dJ0UTTInLw2vyYjJzxjfn-5J8u_l4d_25uf366cv1h9vGdsBKs2UjMHSDnHDsjXMdCDXaYWDjwMWIcsug63FkSnUCJxBMWK6E7EeowCSsuCRvT7r3Kf5cMRe9-GxxrqtgXLNmoud8rCLdf6BcqRq1FBWVJ9SmmHPCSd8nv5j0oBnoY3t6r5_a08f2NHBd26uDV2ePdbug-zv2VFcF3p8ArKEcPCadrcdg0flUg9Qu-n95_AH0sLEU</recordid><startdate>20130430</startdate><enddate>20130430</enddate><creator>Nowinski, Wieslaw L.</creator><creator>Chua, Beng Choon</creator><creator>Johnson, Aleksandra</creator><creator>Qian, Guoyu</creator><creator>Poh, Lan Eng</creator><creator>Yi, Su Hnin Wut</creator><creator>Bivi, Aminah</creator><creator>Nowinska, Natalia G.</creator><general>Elsevier B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7TK</scope></search><sort><creationdate>20130430</creationdate><title>Three-dimensional interactive and stereotactic atlas of head muscles and glands correlated with cranial nerves and surface and sectional neuroanatomy</title><author>Nowinski, Wieslaw L. ; Chua, Beng Choon ; Johnson, Aleksandra ; Qian, Guoyu ; Poh, Lan Eng ; Yi, Su Hnin Wut ; Bivi, Aminah ; Nowinska, Natalia G.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c401t-b1901ed86fe95add40379c88198239e6b1045e917743ef0313c2736590982f3c3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2013</creationdate><topic>Anatomy</topic><topic>Atlases as Topic</topic><topic>Brain atlas</topic><topic>Cranial nerves</topic><topic>Cranial Nerves - anatomy & histology</topic><topic>Echo-Planar Imaging</topic><topic>Facial Muscles - anatomy & histology</topic><topic>Glands</topic><topic>Head - anatomy & histology</topic><topic>Head muscles</topic><topic>Humans</topic><topic>Imaging, Three-Dimensional</topic><topic>Lacrimal Apparatus - anatomy & histology</topic><topic>Masticatory Muscles - anatomy & histology</topic><topic>Muscle, Skeletal - anatomy & histology</topic><topic>Neuroanatomy</topic><topic>Neuroanatomy - methods</topic><topic>Salivary Glands - anatomy & histology</topic><topic>Stereotaxic Techniques</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Nowinski, Wieslaw L.</creatorcontrib><creatorcontrib>Chua, Beng Choon</creatorcontrib><creatorcontrib>Johnson, Aleksandra</creatorcontrib><creatorcontrib>Qian, Guoyu</creatorcontrib><creatorcontrib>Poh, Lan Eng</creatorcontrib><creatorcontrib>Yi, Su Hnin Wut</creatorcontrib><creatorcontrib>Bivi, Aminah</creatorcontrib><creatorcontrib>Nowinska, Natalia G.</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Neurosciences Abstracts</collection><jtitle>Journal of neuroscience methods</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Nowinski, Wieslaw L.</au><au>Chua, Beng Choon</au><au>Johnson, Aleksandra</au><au>Qian, Guoyu</au><au>Poh, Lan Eng</au><au>Yi, Su Hnin Wut</au><au>Bivi, Aminah</au><au>Nowinska, Natalia G.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Three-dimensional interactive and stereotactic atlas of head muscles and glands correlated with cranial nerves and surface and sectional neuroanatomy</atitle><jtitle>Journal of neuroscience methods</jtitle><addtitle>J Neurosci Methods</addtitle><date>2013-04-30</date><risdate>2013</risdate><volume>215</volume><issue>1</issue><spage>12</spage><epage>18</epage><pages>12-18</pages><issn>0165-0270</issn><eissn>1872-678X</eissn><abstract>► A 3D interactive atlas of the head muscles and glands was created from 3T. ► Methods and tools used to construct this stereotactic atlas are described. ► The atlas is correlated with cranial nerves and surface and sectional neuroanatomy. ► This atlas is useful in education, research, and clinical applications.
Three-dimensional (3D) relationships between head muscles and cranial nerves innervating them are complicated. Existing sources present these relationships in illustrations, radiologic scans, or autopsy photographs, which are limited for learning and use. Developed electronic atlases are limited in content, quality, functionality, and/or presentation. We create a truly 3D interactive, stereotactic and high quality atlas, which provides spatial relationships among head muscles, glands and cranial nerves, and correlates them to surface and sectional neuroanatomy.
The head muscles and glands were created from a 3T scan by contouring them and generating 3D models. They were named and structured according to Terminologia anatomica. The muscles were divided into: extra-ocular, facial, masticatory and other muscles, and glands into mouth and other glands. The muscles, glands (and also head) were placed in a stereotactic coordinate system. This content was integrated with cranial nerves and neuroanatomy created earlier.
To explore this complex content, a scalable user interface was designed with 12 modules including central nervous system (cerebrum, cerebellum, brainstem, spinal cord), cranial nerves, muscles, glands, arterial system, venous system, tracts, deep gray nuclei, ventricles, white matter, visual system, head. Anatomy exploration operations include compositing/decompositing, individual/group selection, 3D view-index mapping, 3D labeling, highlighting, distance measuring, 3D brain cutting, and axial/coronal/sagittal triplanar display.
To our best knowledge, this is the first truly 3D, stereotactic, interactive, fairly complete atlas of head muscles, and the first attempt to create a 3D stereotactic atlas of glands. Its use ranges from education of students and patients to research to potential clinical applications.</abstract><cop>Netherlands</cop><pub>Elsevier B.V</pub><pmid>23416136</pmid><doi>10.1016/j.jneumeth.2013.02.005</doi><tpages>7</tpages></addata></record> |
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| subjects | Anatomy Atlases as Topic Brain atlas Cranial nerves Cranial Nerves - anatomy & histology Echo-Planar Imaging Facial Muscles - anatomy & histology Glands Head - anatomy & histology Head muscles Humans Imaging, Three-Dimensional Lacrimal Apparatus - anatomy & histology Masticatory Muscles - anatomy & histology Muscle, Skeletal - anatomy & histology Neuroanatomy Neuroanatomy - methods Salivary Glands - anatomy & histology Stereotaxic Techniques |
| title | Three-dimensional interactive and stereotactic atlas of head muscles and glands correlated with cranial nerves and surface and sectional neuroanatomy |
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