Identification of Cytokinin-Responsive Genes Using Microarray Meta-Analysis and RNA-Seq in Arabidopsis

Cytokinins are N⁶-substituted adenine derivatives that play diverse roles in plant growth and development. We sought to define a robust set of genes regulated by cytokinin as well as to query the response of genes not represented on microarrays. To this end, we performed a meta-analysis of microarra...

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Veröffentlicht in:	Plant physiology (Bethesda) 2013-05, Vol.162 (1), p.272-294
Hauptverfasser:	Bhargava, Apurva, Clabaugh, Ivory, To, Jenn P., Maxwell, Bridey B., Chiang, Yi-Hsuan, Schaller, G. Eric, Loraine, Ann, Kieber, Joseph J.
Format:	Artikel
Sprache:	eng
Schlagworte:	Amino Acid Motifs Arabidopsis - drug effects Arabidopsis - genetics Arabidopsis Proteins - genetics Biological and medical sciences Cluster Analysis Computational Biology Cytokinins Cytokinins - pharmacology Down-Regulation Fundamental and applied biological sciences. Psychology Gene Expression Profiling Gene expression regulation Gene Expression Regulation, Plant Gene Library Genes Genomes High-Throughput Nucleotide Sequencing Molecular Sequence Annotation Oligonucleotide Array Sequence Analysis Plant cells Plant growth regulators Plant physiology and development Plant Roots - drug effects Plant Roots - genetics Plant Shoots - drug effects Plant Shoots - genetics Plants Promoter Regions, Genetic - genetics RNA Splicing RNA, Messenger - genetics RNA, Plant - genetics Seedlings Seedlings - drug effects Seedlings - genetics Sequence Analysis, RNA Signal Transduction SIGNALING AND RESPONSE Transcription factors Up regulation
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