Genetic diversity of the mitochondrial cytochrome b gene in Lutzomyia spp., with special reference to Lutzomyia peruensis, a main vector of Leishmania (Viannia) peruviana in the Peruvian Andes
Haplotype network of the cytochrome b sequences of Lutzomyia peruensis collected from 9 Andean areas in Peru. [Display omitted] ► Cytochrome b (cyt b) gene sequences were determined for 13 sand fly species in Peru. ► Highly polymorphic sites were identified in the middle region of the cyt b gene. ►...
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creator | Yamamoto, Kento Cáceres, Abraham G. Gomez, Eduardo A. Mimori, Tatsuyuki Iwata, Hiroyuki Korenaga, Masataka Sakurai, Tatsuya Katakura, Ken Hashiguchi, Yoshihisa Kato, Hirotomo |
description | Haplotype network of the cytochrome b sequences of Lutzomyia peruensis collected from 9 Andean areas in Peru. [Display omitted]
► Cytochrome b (cyt b) gene sequences were determined for 13 sand fly species in Peru. ► Highly polymorphic sites were identified in the middle region of the cyt b gene. ► Haplotype analysis showed area-dependent genetic polymorphism in Lutzomyia peruensis. ► The cyt b gene will be a useful marker for genetic structure in sand fly populations.
The genetic divergence caused by genetic drift and/or selection is suggested to affect the vectorial capacity and insecticide susceptibility of sand flies, as well as other arthropods. In the present study, cytochrome b (cyt b) gene sequences were determined in 13 species circulating in Peru to establish a basis for analysis of the genetic structure, and the intraspecific genetic diversity was assessed in the Lutzomyia (Lu.) peruensis, a main vector species of Leishmania (Viannia) peruviana in Peruvian Andes. Analysis of intraspecific genetic diversity in the cyt b gene sequences from 36 Lu. peruensis identified 3 highly polymorphic sites in the middle region of the gene. Haplotype and gene network analyses were performed on the cyt b gene sequences of 130 Lu. peruensis in 9 Andean areas from 3 Departments (Ancash, Lima and La Libertad). The results showed that the populations of La Libertad were highly polymorphic and that their haplotypes were distinct from those of Ancash and Lima, where dominant haplotypes were observed, suggesting that a population bottleneck may have occurred in Ancash and Lima, but not in La Libertad. The present study indicated that the middle region of the cyt b gene is useful for the analysis of genetic structure in sand fly populations. |
doi_str_mv | 10.1016/j.actatropica.2013.02.007 |
format | Article |
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► Cytochrome b (cyt b) gene sequences were determined for 13 sand fly species in Peru. ► Highly polymorphic sites were identified in the middle region of the cyt b gene. ► Haplotype analysis showed area-dependent genetic polymorphism in Lutzomyia peruensis. ► The cyt b gene will be a useful marker for genetic structure in sand fly populations.
The genetic divergence caused by genetic drift and/or selection is suggested to affect the vectorial capacity and insecticide susceptibility of sand flies, as well as other arthropods. In the present study, cytochrome b (cyt b) gene sequences were determined in 13 species circulating in Peru to establish a basis for analysis of the genetic structure, and the intraspecific genetic diversity was assessed in the Lutzomyia (Lu.) peruensis, a main vector species of Leishmania (Viannia) peruviana in Peruvian Andes. Analysis of intraspecific genetic diversity in the cyt b gene sequences from 36 Lu. peruensis identified 3 highly polymorphic sites in the middle region of the gene. Haplotype and gene network analyses were performed on the cyt b gene sequences of 130 Lu. peruensis in 9 Andean areas from 3 Departments (Ancash, Lima and La Libertad). The results showed that the populations of La Libertad were highly polymorphic and that their haplotypes were distinct from those of Ancash and Lima, where dominant haplotypes were observed, suggesting that a population bottleneck may have occurred in Ancash and Lima, but not in La Libertad. The present study indicated that the middle region of the cyt b gene is useful for the analysis of genetic structure in sand fly populations.</description><identifier>ISSN: 0001-706X</identifier><identifier>EISSN: 1873-6254</identifier><identifier>DOI: 10.1016/j.actatropica.2013.02.007</identifier><identifier>PMID: 23416127</identifier><language>eng</language><publisher>Netherlands: Elsevier B.V</publisher><subject>Animals ; Arthropoda ; arthropods ; Base Sequence ; Cytochrome b ; Cytochromes b - genetics ; genes ; genetic drift ; genetic techniques and protocols ; Genetic Variation ; Genetics, Population ; Genotype ; Geography ; Haplotype ; Haplotypes ; Insect Vectors - enzymology ; Insect Vectors - genetics ; Insect Vectors - parasitology ; insecticides ; Leishmania ; Leishmania - physiology ; Leishmaniasis - epidemiology ; Leishmaniasis - transmission ; Lutzomyia ; Mitochondrial Proteins - genetics ; Molecular Sequence Data ; nucleotide sequences ; Peru - epidemiology ; Phylogeny ; Psychodidae - enzymology ; Psychodidae - genetics ; Psychodidae - parasitology ; Sand fly ; Sequence Analysis, DNA ; vectorial capacity ; Viannia</subject><ispartof>Acta tropica, 2013-05, Vol.126 (2), p.156-163</ispartof><rights>2013 Elsevier B.V.</rights><rights>Copyright © 2013 Elsevier B.V. All rights reserved.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c529t-67390b4690c5e5f2f22c45ad139ceab032aa25280cc46705f7de3332e3099cfd3</citedby><cites>FETCH-LOGICAL-c529t-67390b4690c5e5f2f22c45ad139ceab032aa25280cc46705f7de3332e3099cfd3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1016/j.actatropica.2013.02.007$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>315,782,786,3552,27931,27932,46002</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/23416127$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Yamamoto, Kento</creatorcontrib><creatorcontrib>Cáceres, Abraham G.</creatorcontrib><creatorcontrib>Gomez, Eduardo A.</creatorcontrib><creatorcontrib>Mimori, Tatsuyuki</creatorcontrib><creatorcontrib>Iwata, Hiroyuki</creatorcontrib><creatorcontrib>Korenaga, Masataka</creatorcontrib><creatorcontrib>Sakurai, Tatsuya</creatorcontrib><creatorcontrib>Katakura, Ken</creatorcontrib><creatorcontrib>Hashiguchi, Yoshihisa</creatorcontrib><creatorcontrib>Kato, Hirotomo</creatorcontrib><title>Genetic diversity of the mitochondrial cytochrome b gene in Lutzomyia spp., with special reference to Lutzomyia peruensis, a main vector of Leishmania (Viannia) peruviana in the Peruvian Andes</title><title>Acta tropica</title><addtitle>Acta Trop</addtitle><description>Haplotype network of the cytochrome b sequences of Lutzomyia peruensis collected from 9 Andean areas in Peru. [Display omitted]
► Cytochrome b (cyt b) gene sequences were determined for 13 sand fly species in Peru. ► Highly polymorphic sites were identified in the middle region of the cyt b gene. ► Haplotype analysis showed area-dependent genetic polymorphism in Lutzomyia peruensis. ► The cyt b gene will be a useful marker for genetic structure in sand fly populations.
The genetic divergence caused by genetic drift and/or selection is suggested to affect the vectorial capacity and insecticide susceptibility of sand flies, as well as other arthropods. In the present study, cytochrome b (cyt b) gene sequences were determined in 13 species circulating in Peru to establish a basis for analysis of the genetic structure, and the intraspecific genetic diversity was assessed in the Lutzomyia (Lu.) peruensis, a main vector species of Leishmania (Viannia) peruviana in Peruvian Andes. Analysis of intraspecific genetic diversity in the cyt b gene sequences from 36 Lu. peruensis identified 3 highly polymorphic sites in the middle region of the gene. Haplotype and gene network analyses were performed on the cyt b gene sequences of 130 Lu. peruensis in 9 Andean areas from 3 Departments (Ancash, Lima and La Libertad). The results showed that the populations of La Libertad were highly polymorphic and that their haplotypes were distinct from those of Ancash and Lima, where dominant haplotypes were observed, suggesting that a population bottleneck may have occurred in Ancash and Lima, but not in La Libertad. The present study indicated that the middle region of the cyt b gene is useful for the analysis of genetic structure in sand fly populations.</description><subject>Animals</subject><subject>Arthropoda</subject><subject>arthropods</subject><subject>Base Sequence</subject><subject>Cytochrome b</subject><subject>Cytochromes b - genetics</subject><subject>genes</subject><subject>genetic drift</subject><subject>genetic techniques and protocols</subject><subject>Genetic Variation</subject><subject>Genetics, Population</subject><subject>Genotype</subject><subject>Geography</subject><subject>Haplotype</subject><subject>Haplotypes</subject><subject>Insect Vectors - enzymology</subject><subject>Insect Vectors - genetics</subject><subject>Insect Vectors - parasitology</subject><subject>insecticides</subject><subject>Leishmania</subject><subject>Leishmania - physiology</subject><subject>Leishmaniasis - epidemiology</subject><subject>Leishmaniasis - transmission</subject><subject>Lutzomyia</subject><subject>Mitochondrial Proteins - genetics</subject><subject>Molecular Sequence Data</subject><subject>nucleotide sequences</subject><subject>Peru - epidemiology</subject><subject>Phylogeny</subject><subject>Psychodidae - enzymology</subject><subject>Psychodidae - genetics</subject><subject>Psychodidae - parasitology</subject><subject>Sand fly</subject><subject>Sequence Analysis, DNA</subject><subject>vectorial capacity</subject><subject>Viannia</subject><issn>0001-706X</issn><issn>1873-6254</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2013</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqNkt1u1DAQhS0EokvhFcDcFakJ_omTzWW1goK0EkhQxJ0160y6Xm3iYDuLlqfro9UhC-odXHnG-s6ckY8Jec1Zzhkv3-5yMBGid4M1kAvGZc5Ezlj1iCz4spJZKVTxmCwYYzyrWPn9jDwLYZc6USnxlJwJWfAyNQtyd409RmtoYw_og41H6loat0g7G53Zur7xFvbUHKfOuw7pht4mDbU9XY_xl-uOFmgYhvyS_rRxm0o0k8Jjix57gzS6B-SAfsQ-2HBJgXaQphzQROcn2zXasO2gT9jFNwt9Kt78FhxSA5PjtNjn0wW96hsMz8mTFvYBX5zOc3Lz_t3X1Yds_en64-pqnRkl6piVlazZpihrZhSqVrRCmEJBw2VtEDZMCgChxJIZU5QVU23VoJRSoGR1bdpGnpOLee7g3Y8RQ9SdDQb3e-jRjUFzWSyLpVIpjH-jvC5FUTGR0HpGjXchpCfTg7cd-KPmTE9Z651-kLWestZM6JR10r482YybDpu_yj_hJuDVDLTgNNx6G_TNlzRBpX-xVLP9aiYwvdzBotfB2CmzxvqUim6c_Y9F7gFYv80H</recordid><startdate>20130501</startdate><enddate>20130501</enddate><creator>Yamamoto, Kento</creator><creator>Cáceres, Abraham G.</creator><creator>Gomez, Eduardo A.</creator><creator>Mimori, Tatsuyuki</creator><creator>Iwata, Hiroyuki</creator><creator>Korenaga, Masataka</creator><creator>Sakurai, Tatsuya</creator><creator>Katakura, Ken</creator><creator>Hashiguchi, Yoshihisa</creator><creator>Kato, Hirotomo</creator><general>Elsevier B.V</general><scope>FBQ</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7SS</scope><scope>8FD</scope><scope>C1K</scope><scope>F1W</scope><scope>FR3</scope><scope>H95</scope><scope>H97</scope><scope>L.G</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope></search><sort><creationdate>20130501</creationdate><title>Genetic diversity of the mitochondrial cytochrome b gene in Lutzomyia spp., with special reference to Lutzomyia peruensis, a main vector of Leishmania (Viannia) peruviana in the Peruvian Andes</title><author>Yamamoto, Kento ; Cáceres, Abraham G. ; Gomez, Eduardo A. ; Mimori, Tatsuyuki ; Iwata, Hiroyuki ; Korenaga, Masataka ; Sakurai, Tatsuya ; Katakura, Ken ; Hashiguchi, Yoshihisa ; Kato, Hirotomo</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c529t-67390b4690c5e5f2f22c45ad139ceab032aa25280cc46705f7de3332e3099cfd3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2013</creationdate><topic>Animals</topic><topic>Arthropoda</topic><topic>arthropods</topic><topic>Base Sequence</topic><topic>Cytochrome b</topic><topic>Cytochromes b - genetics</topic><topic>genes</topic><topic>genetic drift</topic><topic>genetic techniques and protocols</topic><topic>Genetic Variation</topic><topic>Genetics, Population</topic><topic>Genotype</topic><topic>Geography</topic><topic>Haplotype</topic><topic>Haplotypes</topic><topic>Insect Vectors - enzymology</topic><topic>Insect Vectors - genetics</topic><topic>Insect Vectors - parasitology</topic><topic>insecticides</topic><topic>Leishmania</topic><topic>Leishmania - physiology</topic><topic>Leishmaniasis - epidemiology</topic><topic>Leishmaniasis - transmission</topic><topic>Lutzomyia</topic><topic>Mitochondrial Proteins - genetics</topic><topic>Molecular Sequence Data</topic><topic>nucleotide sequences</topic><topic>Peru - epidemiology</topic><topic>Phylogeny</topic><topic>Psychodidae - enzymology</topic><topic>Psychodidae - genetics</topic><topic>Psychodidae - parasitology</topic><topic>Sand fly</topic><topic>Sequence Analysis, DNA</topic><topic>vectorial capacity</topic><topic>Viannia</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Yamamoto, Kento</creatorcontrib><creatorcontrib>Cáceres, Abraham G.</creatorcontrib><creatorcontrib>Gomez, Eduardo A.</creatorcontrib><creatorcontrib>Mimori, Tatsuyuki</creatorcontrib><creatorcontrib>Iwata, Hiroyuki</creatorcontrib><creatorcontrib>Korenaga, Masataka</creatorcontrib><creatorcontrib>Sakurai, Tatsuya</creatorcontrib><creatorcontrib>Katakura, Ken</creatorcontrib><creatorcontrib>Hashiguchi, Yoshihisa</creatorcontrib><creatorcontrib>Kato, Hirotomo</creatorcontrib><collection>AGRIS</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Engineering Research Database</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 3: Aquatic Pollution & Environmental Quality</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><jtitle>Acta tropica</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Yamamoto, Kento</au><au>Cáceres, Abraham G.</au><au>Gomez, Eduardo A.</au><au>Mimori, Tatsuyuki</au><au>Iwata, Hiroyuki</au><au>Korenaga, Masataka</au><au>Sakurai, Tatsuya</au><au>Katakura, Ken</au><au>Hashiguchi, Yoshihisa</au><au>Kato, Hirotomo</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Genetic diversity of the mitochondrial cytochrome b gene in Lutzomyia spp., with special reference to Lutzomyia peruensis, a main vector of Leishmania (Viannia) peruviana in the Peruvian Andes</atitle><jtitle>Acta tropica</jtitle><addtitle>Acta Trop</addtitle><date>2013-05-01</date><risdate>2013</risdate><volume>126</volume><issue>2</issue><spage>156</spage><epage>163</epage><pages>156-163</pages><issn>0001-706X</issn><eissn>1873-6254</eissn><abstract>Haplotype network of the cytochrome b sequences of Lutzomyia peruensis collected from 9 Andean areas in Peru. [Display omitted]
► Cytochrome b (cyt b) gene sequences were determined for 13 sand fly species in Peru. ► Highly polymorphic sites were identified in the middle region of the cyt b gene. ► Haplotype analysis showed area-dependent genetic polymorphism in Lutzomyia peruensis. ► The cyt b gene will be a useful marker for genetic structure in sand fly populations.
The genetic divergence caused by genetic drift and/or selection is suggested to affect the vectorial capacity and insecticide susceptibility of sand flies, as well as other arthropods. In the present study, cytochrome b (cyt b) gene sequences were determined in 13 species circulating in Peru to establish a basis for analysis of the genetic structure, and the intraspecific genetic diversity was assessed in the Lutzomyia (Lu.) peruensis, a main vector species of Leishmania (Viannia) peruviana in Peruvian Andes. Analysis of intraspecific genetic diversity in the cyt b gene sequences from 36 Lu. peruensis identified 3 highly polymorphic sites in the middle region of the gene. Haplotype and gene network analyses were performed on the cyt b gene sequences of 130 Lu. peruensis in 9 Andean areas from 3 Departments (Ancash, Lima and La Libertad). The results showed that the populations of La Libertad were highly polymorphic and that their haplotypes were distinct from those of Ancash and Lima, where dominant haplotypes were observed, suggesting that a population bottleneck may have occurred in Ancash and Lima, but not in La Libertad. The present study indicated that the middle region of the cyt b gene is useful for the analysis of genetic structure in sand fly populations.</abstract><cop>Netherlands</cop><pub>Elsevier B.V</pub><pmid>23416127</pmid><doi>10.1016/j.actatropica.2013.02.007</doi><tpages>8</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Animals Arthropoda arthropods Base Sequence Cytochrome b Cytochromes b - genetics genes genetic drift genetic techniques and protocols Genetic Variation Genetics, Population Genotype Geography Haplotype Haplotypes Insect Vectors - enzymology Insect Vectors - genetics Insect Vectors - parasitology insecticides Leishmania Leishmania - physiology Leishmaniasis - epidemiology Leishmaniasis - transmission Lutzomyia Mitochondrial Proteins - genetics Molecular Sequence Data nucleotide sequences Peru - epidemiology Phylogeny Psychodidae - enzymology Psychodidae - genetics Psychodidae - parasitology Sand fly Sequence Analysis, DNA vectorial capacity Viannia |
title | Genetic diversity of the mitochondrial cytochrome b gene in Lutzomyia spp., with special reference to Lutzomyia peruensis, a main vector of Leishmania (Viannia) peruviana in the Peruvian Andes |
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