A sequence-dependent rigid-base model of DNA

A novel hierarchy of coarse-grain, sequence-dependent, rigid-base models of B-form DNA in solution is introduced. The hierarchy depends on both the assumed range of energetic couplings, and the extent of sequence dependence of the model parameters. A significant feature of the models is that they ex...

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Veröffentlicht in:	The Journal of chemical physics 2013-02, Vol.138 (5), p.055102-055102
Hauptverfasser:	Gonzalez, O, Petkevičiūtė, D, Maddocks, J H
Format:	Artikel
Sprache:	eng
Schlagworte:	Base Sequence DNA DNA - chemistry DNA - genetics Molecular Dynamics Simulation
Online-Zugang:	Volltext
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