Modifications to the imagej computer assisted sperm analysis plugin greatly improve efficiency and fundamentally alter the scope of attainable data
Summary Computer assisted sperm analysis (CASA) has greatly enhanced the quality and quantity of data that can be collected on spermatozoa movements. Open source imagej software allows any researcher to have access to such analyses, but CASA systems in general are not designed to ably process large...
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Veröffentlicht in: | Journal of applied ichthyology 2012-12, Vol.28 (6), p.1013-1016 |
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creator | Purchase, C. F. Earle, P. T. |
description | Summary
Computer assisted sperm analysis (CASA) has greatly enhanced the quality and quantity of data that can be collected on spermatozoa movements. Open source imagej software allows any researcher to have access to such analyses, but CASA systems in general are not designed to ably process large numbers of video sequences. Here we introduce a modified imagej CASA_automated plugin that fundamentally enhances efficiency and will allow higher quality research to be conducted with no extra post‐microscope effort. |
doi_str_mv | 10.1111/jai.12070 |
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Computer assisted sperm analysis (CASA) has greatly enhanced the quality and quantity of data that can be collected on spermatozoa movements. Open source imagej software allows any researcher to have access to such analyses, but CASA systems in general are not designed to ably process large numbers of video sequences. Here we introduce a modified imagej CASA_automated plugin that fundamentally enhances efficiency and will allow higher quality research to be conducted with no extra post‐microscope effort.</description><identifier>ISSN: 0175-8659</identifier><identifier>EISSN: 1439-0426</identifier><identifier>DOI: 10.1111/jai.12070</identifier><language>eng</language><publisher>Berlin: Blackwell Publishing Ltd</publisher><subject>Freshwater ; Sperm ; Studies</subject><ispartof>Journal of applied ichthyology, 2012-12, Vol.28 (6), p.1013-1016</ispartof><rights>2012 Blackwell Verlag GmbH</rights><rights>Copyright © 2012 Blackwell Verlag GmbH, Wiley-Blackwell, Rotherstraße 21, 10245 Berlin, Germany</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c4010-f670fc153de93caf7784cbb7594199700d6317388d9587e885aa2bf083a2e05d3</citedby><cites>FETCH-LOGICAL-c4010-f670fc153de93caf7784cbb7594199700d6317388d9587e885aa2bf083a2e05d3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1111%2Fjai.12070$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1111%2Fjai.12070$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>314,780,784,1417,27924,27925,45574,45575</link.rule.ids></links><search><creatorcontrib>Purchase, C. F.</creatorcontrib><creatorcontrib>Earle, P. T.</creatorcontrib><title>Modifications to the imagej computer assisted sperm analysis plugin greatly improve efficiency and fundamentally alter the scope of attainable data</title><title>Journal of applied ichthyology</title><addtitle>J. Appl. Ichthyol</addtitle><description>Summary
Computer assisted sperm analysis (CASA) has greatly enhanced the quality and quantity of data that can be collected on spermatozoa movements. Open source imagej software allows any researcher to have access to such analyses, but CASA systems in general are not designed to ably process large numbers of video sequences. Here we introduce a modified imagej CASA_automated plugin that fundamentally enhances efficiency and will allow higher quality research to be conducted with no extra post‐microscope effort.</description><subject>Freshwater</subject><subject>Sperm</subject><subject>Studies</subject><issn>0175-8659</issn><issn>1439-0426</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2012</creationdate><recordtype>article</recordtype><recordid>eNqFkUFv1DAQhSMEEkvhwD-wxAUOae04ju1jaaEUShECxNGadcaLl2yc2g6Q38EfxssCBySELyNZ33szeq-qHjJ6zMo72YI_Zg2V9Fa1Yi3XNW2b7na1okyKWnVC363upbSllCqpu1X1_XXovfMWsg9jIjmQ_AmJ38EGt8SG3TRnjARS8iljT9KEcUdghGEpP2Qa5o0fySYi5GEpsimGL0jQFUePo10K2hM3jz3scMwwFAiGveN-S7JhQhIcgZzBj7AekPSQ4X51x8GQ8MGveVR9eP7s_dmL-urNxeXZ6VVtW8po7TpJnWWC96i5BSelau16LYVumdaS0r7jTHKlei2URKUEQLN2VHFokIqeH1WPD77l6psZUzY7nywOA4wY5mQYZ6JjuiT1f7QRUraCMlXQR3-h2zDHklihmGCUayFFoZ4cKBtDShGdmWJJPS6GUbNv0pQmzc8mC3tyYL_6AZd_g-bl6eVvRX1Q7Fv79kcB8bPpJJfCfLy-MPrV23dPz8-vjeA_AHowsDQ</recordid><startdate>201212</startdate><enddate>201212</enddate><creator>Purchase, C. F.</creator><creator>Earle, P. T.</creator><general>Blackwell Publishing Ltd</general><general>Wiley Subscription Services, Inc</general><scope>BSCLL</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QG</scope><scope>7SN</scope><scope>7TN</scope><scope>7U7</scope><scope>C1K</scope><scope>F1W</scope><scope>H95</scope><scope>L.G</scope></search><sort><creationdate>201212</creationdate><title>Modifications to the imagej computer assisted sperm analysis plugin greatly improve efficiency and fundamentally alter the scope of attainable data</title><author>Purchase, C. F. ; Earle, P. T.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c4010-f670fc153de93caf7784cbb7594199700d6317388d9587e885aa2bf083a2e05d3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2012</creationdate><topic>Freshwater</topic><topic>Sperm</topic><topic>Studies</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Purchase, C. F.</creatorcontrib><creatorcontrib>Earle, P. T.</creatorcontrib><collection>Istex</collection><collection>CrossRef</collection><collection>Animal Behavior Abstracts</collection><collection>Ecology Abstracts</collection><collection>Oceanic Abstracts</collection><collection>Toxicology Abstracts</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><jtitle>Journal of applied ichthyology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Purchase, C. F.</au><au>Earle, P. T.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Modifications to the imagej computer assisted sperm analysis plugin greatly improve efficiency and fundamentally alter the scope of attainable data</atitle><jtitle>Journal of applied ichthyology</jtitle><addtitle>J. Appl. Ichthyol</addtitle><date>2012-12</date><risdate>2012</risdate><volume>28</volume><issue>6</issue><spage>1013</spage><epage>1016</epage><pages>1013-1016</pages><issn>0175-8659</issn><eissn>1439-0426</eissn><abstract>Summary
Computer assisted sperm analysis (CASA) has greatly enhanced the quality and quantity of data that can be collected on spermatozoa movements. Open source imagej software allows any researcher to have access to such analyses, but CASA systems in general are not designed to ably process large numbers of video sequences. Here we introduce a modified imagej CASA_automated plugin that fundamentally enhances efficiency and will allow higher quality research to be conducted with no extra post‐microscope effort.</abstract><cop>Berlin</cop><pub>Blackwell Publishing Ltd</pub><doi>10.1111/jai.12070</doi><tpages>4</tpages><oa>free_for_read</oa></addata></record> |
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source | Wiley Journals |
subjects | Freshwater Sperm Studies |
title | Modifications to the imagej computer assisted sperm analysis plugin greatly improve efficiency and fundamentally alter the scope of attainable data |
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