Physiologic Versatility and Growth Flexibility as the Main Characteristics of a Novel Thermoacidophilic Acidianus Strain Isolated from Copahue Geothermal Area in Argentina
A novel thermoacidophilic archaeal strain has been isolated from three geothermal acidic hot springs in Copahue, Argentina. One of the most striking characteristic of ALE1 isolate is its metabolic versatility. It grows on sulphur, tetrathionate, iron (II) and sucrose under aerobic conditions, but it...
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description | A novel thermoacidophilic archaeal strain has been isolated from three geothermal acidic hot springs in Copahue, Argentina. One of the most striking characteristic of ALE1 isolate is its metabolic versatility. It grows on sulphur, tetrathionate, iron (II) and sucrose under aerobic conditions, but it can also develop under anaerobic conditions using iron (III) or sulphur as electron acceptors and sulphur or hydrogen as electron donors autotrophically. A temperature of 75 °C and a pH between 2.5 and 3.0 are strain ALE1 optimal growth conditions, but it is able to oxidise iron (II) even at pH 1.0. Cells are irregular cocci surrounded by a regularly arrayed glycoprotein layer (S-layer). Phylogenetic analysis shows that strain ALE1 belongs to the family Sulfolobaceae in the class Thermoprotei, within the phylum Crenarchaeota. Based on 16S rRNA gene sequence similarity on NCBI database, ALE1 does not have closely related relatives, neither in culture nor uncultured, which is more surprising. Its closest related species are strains of Acidianus hospitalis (91 % of sequence similarity), Acidianus infernus (90 %), Acidianus ambivalens (90 %) and Acidianus manzanensis (90 %). Its DNA base composition of 34.5 %mol C+ G is higher than that reported for other Acidianus species. Considering physiological and phylogenetic characteristics of strain ALE1, we considered it to represent a novel species of the genus Acidianus (candidatus "Acidianus copahuensis"). The aim of this study is to physiologically characterise this novel archaea in order to understand its role in iron and sulphur geochemical cycles in the Copahue geothermal area and to evaluate its potential applications in bioleaching and biooxidation. |
doi_str_mv | 10.1007/s00248-012-0129-4 |
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Alejandra ; Urbieta, M. Sofía ; Ulloa, J. Ricardo ; Toril, Elena González ; Donati, Edgardo R.</creator><creatorcontrib>Giaveno, M. Alejandra ; Urbieta, M. Sofía ; Ulloa, J. Ricardo ; Toril, Elena González ; Donati, Edgardo R.</creatorcontrib><description>A novel thermoacidophilic archaeal strain has been isolated from three geothermal acidic hot springs in Copahue, Argentina. One of the most striking characteristic of ALE1 isolate is its metabolic versatility. It grows on sulphur, tetrathionate, iron (II) and sucrose under aerobic conditions, but it can also develop under anaerobic conditions using iron (III) or sulphur as electron acceptors and sulphur or hydrogen as electron donors autotrophically. A temperature of 75 °C and a pH between 2.5 and 3.0 are strain ALE1 optimal growth conditions, but it is able to oxidise iron (II) even at pH 1.0. Cells are irregular cocci surrounded by a regularly arrayed glycoprotein layer (S-layer). Phylogenetic analysis shows that strain ALE1 belongs to the family Sulfolobaceae in the class Thermoprotei, within the phylum Crenarchaeota. Based on 16S rRNA gene sequence similarity on NCBI database, ALE1 does not have closely related relatives, neither in culture nor uncultured, which is more surprising. Its closest related species are strains of Acidianus hospitalis (91 % of sequence similarity), Acidianus infernus (90 %), Acidianus ambivalens (90 %) and Acidianus manzanensis (90 %). Its DNA base composition of 34.5 %mol C+ G is higher than that reported for other Acidianus species. Considering physiological and phylogenetic characteristics of strain ALE1, we considered it to represent a novel species of the genus Acidianus (candidatus "Acidianus copahuensis"). The aim of this study is to physiologically characterise this novel archaea in order to understand its role in iron and sulphur geochemical cycles in the Copahue geothermal area and to evaluate its potential applications in bioleaching and biooxidation.</description><identifier>ISSN: 0095-3628</identifier><identifier>EISSN: 1432-184X</identifier><identifier>DOI: 10.1007/s00248-012-0129-4</identifier><identifier>PMID: 23052926</identifier><identifier>CODEN: MCBEBU</identifier><language>eng</language><publisher>New York: Springer Science + Business Media</publisher><subject>Acidianus ; Acidianus - classification ; Acidianus - genetics ; Acidianus - growth & development ; Acidianus - isolation & purification ; Acidianus - physiology ; Acidianus ambivalens ; Aerobic conditions ; Aerobiosis ; Anaerobic conditions ; Anaerobiosis ; Archaea ; Argentina ; Base Composition ; Biological and medical sciences ; Biomedical and Life Sciences ; Cell growth ; Crenarchaeota ; DNA, Archaeal - genetics ; Ecology ; Electrons ; Energy sources ; ENVIRONMENTAL MICROBIOLOGY ; Fundamental and applied biological sciences. Psychology ; Geochemical cycles ; Geoecology/Natural Processes ; Growth conditions ; Hot springs ; Hot Springs - microbiology ; Iron ; Iron - metabolism ; Leaching ; Life Sciences ; Microbial Ecology ; Microbiology ; Microorganisms ; Nature Conservation ; Oxidation ; Phylogeny ; RNA, Ribosomal, 16S - genetics ; Sequence Analysis, DNA ; Sulfur ; Sulfur - metabolism ; Water Quality/Water Pollution</subject><ispartof>Microbial ecology, 2013-02, Vol.65 (2), p.336-346</ispartof><rights>2013 Springer Science+Business Media New York</rights><rights>Springer Science+Business Media New York 2012</rights><rights>2014 INIST-CNRS</rights><rights>Springer Science+Business Media New York 2013</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c500t-1682cb8da5f1148877480aac5044cf8ec64b09ae5f72d961539e14d30464ace23</citedby><cites>FETCH-LOGICAL-c500t-1682cb8da5f1148877480aac5044cf8ec64b09ae5f72d961539e14d30464ace23</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.jstor.org/stable/pdf/23361670$$EPDF$$P50$$Gjstor$$H</linktopdf><linktohtml>$$Uhttps://www.jstor.org/stable/23361670$$EHTML$$P50$$Gjstor$$H</linktohtml><link.rule.ids>314,776,780,799,27901,27902,41464,42533,51294,57992,58225</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=26975496$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/23052926$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Giaveno, M. Alejandra</creatorcontrib><creatorcontrib>Urbieta, M. Sofía</creatorcontrib><creatorcontrib>Ulloa, J. Ricardo</creatorcontrib><creatorcontrib>Toril, Elena González</creatorcontrib><creatorcontrib>Donati, Edgardo R.</creatorcontrib><title>Physiologic Versatility and Growth Flexibility as the Main Characteristics of a Novel Thermoacidophilic Acidianus Strain Isolated from Copahue Geothermal Area in Argentina</title><title>Microbial ecology</title><addtitle>Microb Ecol</addtitle><addtitle>Microb Ecol</addtitle><description>A novel thermoacidophilic archaeal strain has been isolated from three geothermal acidic hot springs in Copahue, Argentina. One of the most striking characteristic of ALE1 isolate is its metabolic versatility. It grows on sulphur, tetrathionate, iron (II) and sucrose under aerobic conditions, but it can also develop under anaerobic conditions using iron (III) or sulphur as electron acceptors and sulphur or hydrogen as electron donors autotrophically. A temperature of 75 °C and a pH between 2.5 and 3.0 are strain ALE1 optimal growth conditions, but it is able to oxidise iron (II) even at pH 1.0. Cells are irregular cocci surrounded by a regularly arrayed glycoprotein layer (S-layer). Phylogenetic analysis shows that strain ALE1 belongs to the family Sulfolobaceae in the class Thermoprotei, within the phylum Crenarchaeota. Based on 16S rRNA gene sequence similarity on NCBI database, ALE1 does not have closely related relatives, neither in culture nor uncultured, which is more surprising. Its closest related species are strains of Acidianus hospitalis (91 % of sequence similarity), Acidianus infernus (90 %), Acidianus ambivalens (90 %) and Acidianus manzanensis (90 %). Its DNA base composition of 34.5 %mol C+ G is higher than that reported for other Acidianus species. Considering physiological and phylogenetic characteristics of strain ALE1, we considered it to represent a novel species of the genus Acidianus (candidatus "Acidianus copahuensis"). The aim of this study is to physiologically characterise this novel archaea in order to understand its role in iron and sulphur geochemical cycles in the Copahue geothermal area and to evaluate its potential applications in bioleaching and biooxidation.</description><subject>Acidianus</subject><subject>Acidianus - classification</subject><subject>Acidianus - genetics</subject><subject>Acidianus - growth & development</subject><subject>Acidianus - isolation & purification</subject><subject>Acidianus - physiology</subject><subject>Acidianus ambivalens</subject><subject>Aerobic conditions</subject><subject>Aerobiosis</subject><subject>Anaerobic conditions</subject><subject>Anaerobiosis</subject><subject>Archaea</subject><subject>Argentina</subject><subject>Base Composition</subject><subject>Biological and medical sciences</subject><subject>Biomedical and Life Sciences</subject><subject>Cell growth</subject><subject>Crenarchaeota</subject><subject>DNA, Archaeal - genetics</subject><subject>Ecology</subject><subject>Electrons</subject><subject>Energy sources</subject><subject>ENVIRONMENTAL MICROBIOLOGY</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Geochemical cycles</subject><subject>Geoecology/Natural Processes</subject><subject>Growth conditions</subject><subject>Hot springs</subject><subject>Hot Springs - microbiology</subject><subject>Iron</subject><subject>Iron - metabolism</subject><subject>Leaching</subject><subject>Life Sciences</subject><subject>Microbial Ecology</subject><subject>Microbiology</subject><subject>Microorganisms</subject><subject>Nature Conservation</subject><subject>Oxidation</subject><subject>Phylogeny</subject><subject>RNA, Ribosomal, 16S - genetics</subject><subject>Sequence Analysis, DNA</subject><subject>Sulfur</subject><subject>Sulfur - metabolism</subject><subject>Water Quality/Water Pollution</subject><issn>0095-3628</issn><issn>1432-184X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2013</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>BENPR</sourceid><recordid>eNp9kU2P0zAQhiMEYsvCD-AAsoRW4hLwVxznWFVsWWn5kFgQt2jqTBpXaVxsh6W_iT-JoxRYceAwmpHneWdGfrPsKaOvGKXl60AplzqnjE9R5fJetmBS8Jxp-fV-tqC0KnKhuD7LHoWwo5SViouH2RkXtOAVV4vs58fuGKzr3dYa8gV9gGh7G48EhoasvbuNHbns8YfdnJ4DiR2Sd2AHsurAg4nobYjWBOJaAuS9-449uenQ7x0Y27hDl5SGLFNtYRgD-RT9pL4KroeIDWm925OVO0A3Ilmji5MWerL0CCSBS7_FIdoBHmcPWugDPjnl8-zz5Zub1dv8-sP6arW8zk1BacyZ0txsdANFy5jUuiylpgCpKaVpNRolN7QCLNqSN5VihaiQyUZQqSQY5OI8eznPPXj3bcQQ670NBvseBnRjqNNXM5UM4GVCX_yD7tzoh3RdorSQpWRFkSg2U8a7EDy29cHbPfhjzWg9OVnPTtbJxSmqWibN89PkcbPH5o_it3UJuDgBEAz0rYfB2PCXU1VZyGri-MyF1Bq26O-c-J_tz2bRLkTn7ywXiqmSil9S4sE0</recordid><startdate>20130201</startdate><enddate>20130201</enddate><creator>Giaveno, M. 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Alejandra ; Urbieta, M. Sofía ; Ulloa, J. 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Psychology</topic><topic>Geochemical cycles</topic><topic>Geoecology/Natural Processes</topic><topic>Growth conditions</topic><topic>Hot springs</topic><topic>Hot Springs - microbiology</topic><topic>Iron</topic><topic>Iron - metabolism</topic><topic>Leaching</topic><topic>Life Sciences</topic><topic>Microbial Ecology</topic><topic>Microbiology</topic><topic>Microorganisms</topic><topic>Nature Conservation</topic><topic>Oxidation</topic><topic>Phylogeny</topic><topic>RNA, Ribosomal, 16S - genetics</topic><topic>Sequence Analysis, DNA</topic><topic>Sulfur</topic><topic>Sulfur - metabolism</topic><topic>Water Quality/Water Pollution</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Giaveno, M. Alejandra</creatorcontrib><creatorcontrib>Urbieta, M. Sofía</creatorcontrib><creatorcontrib>Ulloa, J. 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Alejandra</au><au>Urbieta, M. Sofía</au><au>Ulloa, J. Ricardo</au><au>Toril, Elena González</au><au>Donati, Edgardo R.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Physiologic Versatility and Growth Flexibility as the Main Characteristics of a Novel Thermoacidophilic Acidianus Strain Isolated from Copahue Geothermal Area in Argentina</atitle><jtitle>Microbial ecology</jtitle><stitle>Microb Ecol</stitle><addtitle>Microb Ecol</addtitle><date>2013-02-01</date><risdate>2013</risdate><volume>65</volume><issue>2</issue><spage>336</spage><epage>346</epage><pages>336-346</pages><issn>0095-3628</issn><eissn>1432-184X</eissn><coden>MCBEBU</coden><abstract>A novel thermoacidophilic archaeal strain has been isolated from three geothermal acidic hot springs in Copahue, Argentina. One of the most striking characteristic of ALE1 isolate is its metabolic versatility. It grows on sulphur, tetrathionate, iron (II) and sucrose under aerobic conditions, but it can also develop under anaerobic conditions using iron (III) or sulphur as electron acceptors and sulphur or hydrogen as electron donors autotrophically. A temperature of 75 °C and a pH between 2.5 and 3.0 are strain ALE1 optimal growth conditions, but it is able to oxidise iron (II) even at pH 1.0. Cells are irregular cocci surrounded by a regularly arrayed glycoprotein layer (S-layer). Phylogenetic analysis shows that strain ALE1 belongs to the family Sulfolobaceae in the class Thermoprotei, within the phylum Crenarchaeota. Based on 16S rRNA gene sequence similarity on NCBI database, ALE1 does not have closely related relatives, neither in culture nor uncultured, which is more surprising. Its closest related species are strains of Acidianus hospitalis (91 % of sequence similarity), Acidianus infernus (90 %), Acidianus ambivalens (90 %) and Acidianus manzanensis (90 %). Its DNA base composition of 34.5 %mol C+ G is higher than that reported for other Acidianus species. Considering physiological and phylogenetic characteristics of strain ALE1, we considered it to represent a novel species of the genus Acidianus (candidatus "Acidianus copahuensis"). The aim of this study is to physiologically characterise this novel archaea in order to understand its role in iron and sulphur geochemical cycles in the Copahue geothermal area and to evaluate its potential applications in bioleaching and biooxidation.</abstract><cop>New York</cop><pub>Springer Science + Business Media</pub><pmid>23052926</pmid><doi>10.1007/s00248-012-0129-4</doi><tpages>11</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Acidianus Acidianus - classification Acidianus - genetics Acidianus - growth & development Acidianus - isolation & purification Acidianus - physiology Acidianus ambivalens Aerobic conditions Aerobiosis Anaerobic conditions Anaerobiosis Archaea Argentina Base Composition Biological and medical sciences Biomedical and Life Sciences Cell growth Crenarchaeota DNA, Archaeal - genetics Ecology Electrons Energy sources ENVIRONMENTAL MICROBIOLOGY Fundamental and applied biological sciences. Psychology Geochemical cycles Geoecology/Natural Processes Growth conditions Hot springs Hot Springs - microbiology Iron Iron - metabolism Leaching Life Sciences Microbial Ecology Microbiology Microorganisms Nature Conservation Oxidation Phylogeny RNA, Ribosomal, 16S - genetics Sequence Analysis, DNA Sulfur Sulfur - metabolism Water Quality/Water Pollution |
title | Physiologic Versatility and Growth Flexibility as the Main Characteristics of a Novel Thermoacidophilic Acidianus Strain Isolated from Copahue Geothermal Area in Argentina |
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