Prevalence and genetic diversity of Bartonella species in sika deer ( Cervus nippon ) in Japan
Abstract We report the first description of Bartonella prevalence and genetic diversity in 64 Honshu sika deer ( Cervus nippon centralis ) and 18 Yezo sika deer ( Cervus nippon yesoensis ) in Japan. Overall, Bartonella bacteremia prevalence was 41.5% (34/82). The prevalence in wild deer parasitized...
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| Veröffentlicht in: | Comparative immunology, microbiology and infectious diseases microbiology and infectious diseases, 2012-12, Vol.35 (6), p.575-581 |
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| container_title | Comparative immunology, microbiology and infectious diseases |
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| creator | Sato, Shingo Kabeya, Hidenori Yamazaki, Mari Takeno, Shinako Suzuki, Kazuo Kobayashi, Shinichi Souma, Kousaku Masuko, Takayoshi Chomel, Bruno B Maruyama, Soichi |
| description | Abstract We report the first description of Bartonella prevalence and genetic diversity in 64 Honshu sika deer ( Cervus nippon centralis ) and 18 Yezo sika deer ( Cervus nippon yesoensis ) in Japan. Overall, Bartonella bacteremia prevalence was 41.5% (34/82). The prevalence in wild deer parasitized with ticks and deer keds was 61.8% (34/55), whereas no isolates were detected in captive deer (0/27) free of ectoparasites. The isolates belonged to 11 genogroups based on a combination of the gltA and rpoB gene sequences. Phylogenetic analysis of concatenated sequences of the ftsZ , gltA , ribC , and rpoB genes of 11 representative isolates showed that Japanese sika deer harbor three Bartonella species, including B. capreoli and two novel Bartonella species. All Yezo deer's isolates were identical to B. capreoli B28980 strain isolated from an elk in the USA, based on the sequences of the ftsZ , gltA , and rpoB genes. In contrast, the isolates from Honshu deer showed a higher genetic diversity. |
| doi_str_mv | 10.1016/j.cimid.2012.07.001 |
| format | Article |
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Overall, Bartonella bacteremia prevalence was 41.5% (34/82). The prevalence in wild deer parasitized with ticks and deer keds was 61.8% (34/55), whereas no isolates were detected in captive deer (0/27) free of ectoparasites. The isolates belonged to 11 genogroups based on a combination of the gltA and rpoB gene sequences. Phylogenetic analysis of concatenated sequences of the ftsZ , gltA , ribC , and rpoB genes of 11 representative isolates showed that Japanese sika deer harbor three Bartonella species, including B. capreoli and two novel Bartonella species. All Yezo deer's isolates were identical to B. capreoli B28980 strain isolated from an elk in the USA, based on the sequences of the ftsZ , gltA , and rpoB genes. In contrast, the isolates from Honshu deer showed a higher genetic diversity.</description><identifier>ISSN: 0147-9571</identifier><identifier>EISSN: 1878-1667</identifier><identifier>DOI: 10.1016/j.cimid.2012.07.001</identifier><identifier>PMID: 22832020</identifier><identifier>CODEN: CIMIDV</identifier><language>eng</language><publisher>Kidlington: Elsevier Ltd</publisher><subject>Allergy and Immunology ; Animals ; Bacteremia ; Bacteremia - epidemiology ; Bacteremia - microbiology ; Bacteremia - veterinary ; Bacteriology ; Bartonella ; Bartonella - classification ; Bartonella - genetics ; Bartonella - isolation & purification ; Bartonella Infections - epidemiology ; Bartonella Infections - microbiology ; Bartonella Infections - veterinary ; Biological and medical sciences ; Deer ; Deer - microbiology ; DNA, Bacterial - genetics ; Fundamental and applied biological sciences. Psychology ; Genetic Variation ; Infectious Disease ; Japan ; Japan - epidemiology ; Microbiology ; Miscellaneous ; Phylogeny ; Polymerase Chain Reaction - veterinary ; Prevalence</subject><ispartof>Comparative immunology, microbiology and infectious diseases, 2012-12, Vol.35 (6), p.575-581</ispartof><rights>Elsevier Ltd</rights><rights>2012 Elsevier Ltd</rights><rights>2015 INIST-CNRS</rights><rights>Copyright © 2012 Elsevier Ltd. All rights reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c543t-c8bd436a86b8c93be38a4be5824fbf205e855ae3fdc4f68d83943bd53ace26de3</citedby><cites>FETCH-LOGICAL-c543t-c8bd436a86b8c93be38a4be5824fbf205e855ae3fdc4f68d83943bd53ace26de3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S0147957112000823$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,776,780,3537,27901,27902,65306</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=26607108$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/22832020$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Sato, Shingo</creatorcontrib><creatorcontrib>Kabeya, Hidenori</creatorcontrib><creatorcontrib>Yamazaki, Mari</creatorcontrib><creatorcontrib>Takeno, Shinako</creatorcontrib><creatorcontrib>Suzuki, Kazuo</creatorcontrib><creatorcontrib>Kobayashi, Shinichi</creatorcontrib><creatorcontrib>Souma, Kousaku</creatorcontrib><creatorcontrib>Masuko, Takayoshi</creatorcontrib><creatorcontrib>Chomel, Bruno B</creatorcontrib><creatorcontrib>Maruyama, Soichi</creatorcontrib><title>Prevalence and genetic diversity of Bartonella species in sika deer ( Cervus nippon ) in Japan</title><title>Comparative immunology, microbiology and infectious diseases</title><addtitle>Comp Immunol Microbiol Infect Dis</addtitle><description>Abstract We report the first description of Bartonella prevalence and genetic diversity in 64 Honshu sika deer ( Cervus nippon centralis ) and 18 Yezo sika deer ( Cervus nippon yesoensis ) in Japan. Overall, Bartonella bacteremia prevalence was 41.5% (34/82). The prevalence in wild deer parasitized with ticks and deer keds was 61.8% (34/55), whereas no isolates were detected in captive deer (0/27) free of ectoparasites. The isolates belonged to 11 genogroups based on a combination of the gltA and rpoB gene sequences. Phylogenetic analysis of concatenated sequences of the ftsZ , gltA , ribC , and rpoB genes of 11 representative isolates showed that Japanese sika deer harbor three Bartonella species, including B. capreoli and two novel Bartonella species. All Yezo deer's isolates were identical to B. capreoli B28980 strain isolated from an elk in the USA, based on the sequences of the ftsZ , gltA , and rpoB genes. In contrast, the isolates from Honshu deer showed a higher genetic diversity.</description><subject>Allergy and Immunology</subject><subject>Animals</subject><subject>Bacteremia</subject><subject>Bacteremia - epidemiology</subject><subject>Bacteremia - microbiology</subject><subject>Bacteremia - veterinary</subject><subject>Bacteriology</subject><subject>Bartonella</subject><subject>Bartonella - classification</subject><subject>Bartonella - genetics</subject><subject>Bartonella - isolation & purification</subject><subject>Bartonella Infections - epidemiology</subject><subject>Bartonella Infections - microbiology</subject><subject>Bartonella Infections - veterinary</subject><subject>Biological and medical sciences</subject><subject>Deer</subject><subject>Deer - microbiology</subject><subject>DNA, Bacterial - genetics</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Genetic Variation</subject><subject>Infectious Disease</subject><subject>Japan</subject><subject>Japan - epidemiology</subject><subject>Microbiology</subject><subject>Miscellaneous</subject><subject>Phylogeny</subject><subject>Polymerase Chain Reaction - veterinary</subject><subject>Prevalence</subject><issn>0147-9571</issn><issn>1878-1667</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2012</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkk-r1DAUxYMovvHpJxAkG-G5aL1JmjZdKOjgXx4oqFtDmtxK5nXSmrQD8-1NnVHBzVtlkd-593LOIeQxg5IBq5_vSuv33pUcGC-hKQHYHbJhqlEFq-vmLtkAq5qilQ27IA9S2gFAyyp2n1xwrgQHDhvy_XPEgxkwWKQmOPoDA87eUucPGJOfj3Ts6WsT5zHgMBiaJrQeE_WBJn9jqEOM9IpuMR6WRIOfpjHQZ-v3RzOZ8JDc682Q8NH5vSTf3r75un1fXH9692H76rqwshJzYVXnKlEbVXfKtqJDoUzVoVS86rueg0QlpUHRO1v1tXJKtJXonBTGIq8diktydZo7xfHngmnWe5_senHAcUmacSWh5VCp29FskRSqBZlRcUJtHFOK2Osp-r2JR81Arxnonf6dgV4z0NDonEFWPTkvWLo9ur-aP6Zn4OkZMMmaoY8mWJ_-cXUNDYP10hcnDrNzB49Rp-x9Tsr5iHbWbvS3HPLyP70dfPB55Q0eMe3GJYYcimY6ZY3-stZlbQvjuSmKC_ELR5O5nw</recordid><startdate>20121201</startdate><enddate>20121201</enddate><creator>Sato, Shingo</creator><creator>Kabeya, Hidenori</creator><creator>Yamazaki, Mari</creator><creator>Takeno, Shinako</creator><creator>Suzuki, Kazuo</creator><creator>Kobayashi, Shinichi</creator><creator>Souma, Kousaku</creator><creator>Masuko, Takayoshi</creator><creator>Chomel, Bruno B</creator><creator>Maruyama, Soichi</creator><general>Elsevier Ltd</general><general>Elsevier</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7QL</scope><scope>C1K</scope></search><sort><creationdate>20121201</creationdate><title>Prevalence and genetic diversity of Bartonella species in sika deer ( Cervus nippon ) in Japan</title><author>Sato, Shingo ; Kabeya, Hidenori ; Yamazaki, Mari ; Takeno, Shinako ; Suzuki, Kazuo ; Kobayashi, Shinichi ; Souma, Kousaku ; Masuko, Takayoshi ; Chomel, Bruno B ; Maruyama, Soichi</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c543t-c8bd436a86b8c93be38a4be5824fbf205e855ae3fdc4f68d83943bd53ace26de3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2012</creationdate><topic>Allergy and Immunology</topic><topic>Animals</topic><topic>Bacteremia</topic><topic>Bacteremia - epidemiology</topic><topic>Bacteremia - microbiology</topic><topic>Bacteremia - veterinary</topic><topic>Bacteriology</topic><topic>Bartonella</topic><topic>Bartonella - classification</topic><topic>Bartonella - genetics</topic><topic>Bartonella - isolation & purification</topic><topic>Bartonella Infections - epidemiology</topic><topic>Bartonella Infections - microbiology</topic><topic>Bartonella Infections - veterinary</topic><topic>Biological and medical sciences</topic><topic>Deer</topic><topic>Deer - microbiology</topic><topic>DNA, Bacterial - genetics</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Genetic Variation</topic><topic>Infectious Disease</topic><topic>Japan</topic><topic>Japan - epidemiology</topic><topic>Microbiology</topic><topic>Miscellaneous</topic><topic>Phylogeny</topic><topic>Polymerase Chain Reaction - veterinary</topic><topic>Prevalence</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Sato, Shingo</creatorcontrib><creatorcontrib>Kabeya, Hidenori</creatorcontrib><creatorcontrib>Yamazaki, Mari</creatorcontrib><creatorcontrib>Takeno, Shinako</creatorcontrib><creatorcontrib>Suzuki, Kazuo</creatorcontrib><creatorcontrib>Kobayashi, Shinichi</creatorcontrib><creatorcontrib>Souma, Kousaku</creatorcontrib><creatorcontrib>Masuko, Takayoshi</creatorcontrib><creatorcontrib>Chomel, Bruno B</creatorcontrib><creatorcontrib>Maruyama, Soichi</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Environmental Sciences and Pollution Management</collection><jtitle>Comparative immunology, microbiology and infectious diseases</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Sato, Shingo</au><au>Kabeya, Hidenori</au><au>Yamazaki, Mari</au><au>Takeno, Shinako</au><au>Suzuki, Kazuo</au><au>Kobayashi, Shinichi</au><au>Souma, Kousaku</au><au>Masuko, Takayoshi</au><au>Chomel, Bruno B</au><au>Maruyama, Soichi</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Prevalence and genetic diversity of Bartonella species in sika deer ( Cervus nippon ) in Japan</atitle><jtitle>Comparative immunology, microbiology and infectious diseases</jtitle><addtitle>Comp Immunol Microbiol Infect Dis</addtitle><date>2012-12-01</date><risdate>2012</risdate><volume>35</volume><issue>6</issue><spage>575</spage><epage>581</epage><pages>575-581</pages><issn>0147-9571</issn><eissn>1878-1667</eissn><coden>CIMIDV</coden><abstract>Abstract We report the first description of Bartonella prevalence and genetic diversity in 64 Honshu sika deer ( Cervus nippon centralis ) and 18 Yezo sika deer ( Cervus nippon yesoensis ) in Japan. Overall, Bartonella bacteremia prevalence was 41.5% (34/82). The prevalence in wild deer parasitized with ticks and deer keds was 61.8% (34/55), whereas no isolates were detected in captive deer (0/27) free of ectoparasites. The isolates belonged to 11 genogroups based on a combination of the gltA and rpoB gene sequences. Phylogenetic analysis of concatenated sequences of the ftsZ , gltA , ribC , and rpoB genes of 11 representative isolates showed that Japanese sika deer harbor three Bartonella species, including B. capreoli and two novel Bartonella species. All Yezo deer's isolates were identical to B. capreoli B28980 strain isolated from an elk in the USA, based on the sequences of the ftsZ , gltA , and rpoB genes. In contrast, the isolates from Honshu deer showed a higher genetic diversity.</abstract><cop>Kidlington</cop><pub>Elsevier Ltd</pub><pmid>22832020</pmid><doi>10.1016/j.cimid.2012.07.001</doi><tpages>7</tpages></addata></record> |
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| ispartof | Comparative immunology, microbiology and infectious diseases, 2012-12, Vol.35 (6), p.575-581 |
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| subjects | Allergy and Immunology Animals Bacteremia Bacteremia - epidemiology Bacteremia - microbiology Bacteremia - veterinary Bacteriology Bartonella Bartonella - classification Bartonella - genetics Bartonella - isolation & purification Bartonella Infections - epidemiology Bartonella Infections - microbiology Bartonella Infections - veterinary Biological and medical sciences Deer Deer - microbiology DNA, Bacterial - genetics Fundamental and applied biological sciences. Psychology Genetic Variation Infectious Disease Japan Japan - epidemiology Microbiology Miscellaneous Phylogeny Polymerase Chain Reaction - veterinary Prevalence |
| title | Prevalence and genetic diversity of Bartonella species in sika deer ( Cervus nippon ) in Japan |
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