Puerto Rico and Florida manatees represent genetically distinct groups

The West Indian manatee ( Trichechus manatus ) populations in Florida ( T. m. latirostris ) and Puerto Rico ( T. m. manatus ) are considered distinct subspecies and are listed together as endangered under the United States Endangered Species Act. Sustained management and conservation efforts for the...

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Veröffentlicht in:Conservation genetics 2012-12, Vol.13 (6), p.1623-1635
Hauptverfasser: Hunter, Margaret E., Mignucci-Giannoni, Antonio A., Tucker, Kimberly Pause, King, Timothy L., Bonde, Robert K., Gray, Brian A., McGuire, Peter M.
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container_end_page 1635
container_issue 6
container_start_page 1623
container_title Conservation genetics
container_volume 13
creator Hunter, Margaret E.
Mignucci-Giannoni, Antonio A.
Tucker, Kimberly Pause
King, Timothy L.
Bonde, Robert K.
Gray, Brian A.
McGuire, Peter M.
description The West Indian manatee ( Trichechus manatus ) populations in Florida ( T. m. latirostris ) and Puerto Rico ( T. m. manatus ) are considered distinct subspecies and are listed together as endangered under the United States Endangered Species Act. Sustained management and conservation efforts for the Florida subspecies have led to the suggested reclassification of the species to a threatened or delisted status. However, the two populations are geographically distant, morphologically distinct, and habitat degradation and boat strikes continue to threaten the Puerto Rico population. Here, 15 microsatellite markers and mitochondrial control region sequences were used to determine the relatedness of the two populations and investigate the genetic diversity and phylogeographic organization of the Puerto Rico population. Highly divergent allele frequencies were identified between Florida and Puerto Rico using microsatellite ( F ST  = 0.16; R ST  = 0.12 ( P  
doi_str_mv 10.1007/s10592-012-0414-2
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Sustained management and conservation efforts for the Florida subspecies have led to the suggested reclassification of the species to a threatened or delisted status. However, the two populations are geographically distant, morphologically distinct, and habitat degradation and boat strikes continue to threaten the Puerto Rico population. Here, 15 microsatellite markers and mitochondrial control region sequences were used to determine the relatedness of the two populations and investigate the genetic diversity and phylogeographic organization of the Puerto Rico population. Highly divergent allele frequencies were identified between Florida and Puerto Rico using microsatellite ( F ST  = 0.16; R ST  = 0.12 ( P  &lt; 0.001)) and mitochondrial ( F ST  = 0.66; Ф ST  = 0.50 ( P  &lt; 0.001)) DNA. Microsatellite Bayesian cluster analyses detected two populations ( K  = 2) and no admixture or recent migrants between Florida ( q  = 0.99) and Puerto Rico ( q  = 0.98). The microsatellite genetic diversity values in Puerto Rico (H E  = 0.45; N A  = 3.9), were similar, but lower than those previously identified in Florida (H E  = 0.48, N A  = 4.8). Within Puerto Rico, the mitochondrial genetic diversity values (π = 0.001; h  = 0.49) were slightly lower than those previously reported (π = 0.002; h  = 0.54) and strong phylogeographic structure was identified ( F ST global  = 0.82; Ф ST global  = 0.78 ( P  &lt; 0.001)). The genetic division with Florida, low diversity, small population size ( N  = 250), and distinct threats and habitat emphasize the need for separate protections in Puerto Rico. 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Sustained management and conservation efforts for the Florida subspecies have led to the suggested reclassification of the species to a threatened or delisted status. However, the two populations are geographically distant, morphologically distinct, and habitat degradation and boat strikes continue to threaten the Puerto Rico population. Here, 15 microsatellite markers and mitochondrial control region sequences were used to determine the relatedness of the two populations and investigate the genetic diversity and phylogeographic organization of the Puerto Rico population. Highly divergent allele frequencies were identified between Florida and Puerto Rico using microsatellite ( F ST  = 0.16; R ST  = 0.12 ( P  &lt; 0.001)) and mitochondrial ( F ST  = 0.66; Ф ST  = 0.50 ( P  &lt; 0.001)) DNA. Microsatellite Bayesian cluster analyses detected two populations ( K  = 2) and no admixture or recent migrants between Florida ( q  = 0.99) and Puerto Rico ( q  = 0.98). The microsatellite genetic diversity values in Puerto Rico (H E  = 0.45; N A  = 3.9), were similar, but lower than those previously identified in Florida (H E  = 0.48, N A  = 4.8). Within Puerto Rico, the mitochondrial genetic diversity values (π = 0.001; h  = 0.49) were slightly lower than those previously reported (π = 0.002; h  = 0.54) and strong phylogeographic structure was identified ( F ST global  = 0.82; Ф ST global  = 0.78 ( P  &lt; 0.001)). The genetic division with Florida, low diversity, small population size ( N  = 250), and distinct threats and habitat emphasize the need for separate protections in Puerto Rico. 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Sustained management and conservation efforts for the Florida subspecies have led to the suggested reclassification of the species to a threatened or delisted status. However, the two populations are geographically distant, morphologically distinct, and habitat degradation and boat strikes continue to threaten the Puerto Rico population. Here, 15 microsatellite markers and mitochondrial control region sequences were used to determine the relatedness of the two populations and investigate the genetic diversity and phylogeographic organization of the Puerto Rico population. Highly divergent allele frequencies were identified between Florida and Puerto Rico using microsatellite ( F ST  = 0.16; R ST  = 0.12 ( P  &lt; 0.001)) and mitochondrial ( F ST  = 0.66; Ф ST  = 0.50 ( P  &lt; 0.001)) DNA. Microsatellite Bayesian cluster analyses detected two populations ( K  = 2) and no admixture or recent migrants between Florida ( q  = 0.99) and Puerto Rico ( q  = 0.98). 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subjects Animal Genetics and Genomics
Aquatic mammals
Biodiversity
Biomedical and Life Sciences
Conservation biology
Conservation Biology/Ecology
Ecology
Endangered species
Environmental degradation
Environmental protection
Evolutionary Biology
Genetic diversity
Life Sciences
Marine mammals
Mitochondrial DNA
Phylogenetics
Plant Genetics and Genomics
Population number
Research Article
Satellite DNA
Subpopulations
Threatened species
Trichechidae
Trichechus manatus
title Puerto Rico and Florida manatees represent genetically distinct groups
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