Visual detection of STAT5B gene expression in living cell using the hairpin DNA modified gold nanoparticle beacon
Signal transducer and activator of transcription 5B (STAT5B) is an important protein in JAK-STAT signaling pathway that is responsible for the metastasis and proliferation of tumor cells. Determination of the STAT5B messenger Ribonucleic Acid (mRNA) relating to the STAT5B expression provides insight...
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description | Signal transducer and activator of transcription 5B (STAT5B) is an important protein in JAK-STAT signaling pathway that is responsible for the metastasis and proliferation of tumor cells. Determination of the STAT5B messenger Ribonucleic Acid (mRNA) relating to the STAT5B expression provides insight into the mechanism of tumor progression. In this study, we designed and used a special hairpin deoxyribonucleic acid (DNA) for human STAT5B mRNA to functionalize gold nanoparticles, which served as a beacon for detecting human STAT5B expression. Up to 90% quenching efficiency was achieved. Upon hybridizing with the target mRNA, the hairpin DNA modified gold nanoparticle beacons (hDAuNP beacons) release the fluorophores attached at 5′ end of the oligonucleotide sequence. The fluorescence properties of the beacon before and after the hybridization with the complementary DNA were confirmed in vitro. The stability of hDAuNP beacons against degradation by DNase I and GSH indicated that the prepared beacon is stable inside cells. The detected fluorescence in MCF-7 cancer cells correlates with the specific STAT5B mRNA expression, which is consistent with the result from PCR measurement. Fluorescence microscopy showed that the hDAuNP beacons internalized in cells without using transfection agents, with intracellular distribution in the cytoplasm rather than the nucleus. The results demonstrated that this beacon could directly provide quantitative measurement of the intracellular STAT5B mRNA in living cells. Compared to the previous approaches, this beacon has advantages of higher target to background ratio of detection and an increased resistance to nuclease degradation. The strategy reported in this study is a promising approach for the intracellular measurement of RNA or protein expression in living cells, and has great potential in the study of drug screening and discovery.
► The special sequence of hairpin DNA for human STAT5B mRNA was designed by bioinformatical method. ► The quenching efficiency up to 90%. ► The prepared beacon is stable inside cells. ► The beacons were uptaken by cell without any transfection agents. ► Using this beacon, the expression of the STAT5B gene was successfully detected in living MCF-7 cells. |
doi_str_mv | 10.1016/j.bios.2012.06.062 |
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► The special sequence of hairpin DNA for human STAT5B mRNA was designed by bioinformatical method. ► The quenching efficiency up to 90%. ► The prepared beacon is stable inside cells. ► The beacons were uptaken by cell without any transfection agents. ► Using this beacon, the expression of the STAT5B gene was successfully detected in living MCF-7 cells.</description><identifier>ISSN: 0956-5663</identifier><identifier>EISSN: 1873-4235</identifier><identifier>DOI: 10.1016/j.bios.2012.06.062</identifier><identifier>PMID: 23122230</identifier><language>eng</language><publisher>Kidlington: Elsevier B.V</publisher><subject>Beacon ; Biological and medical sciences ; Biosensing Techniques - instrumentation ; Biotechnology ; Breast Neoplasms - genetics ; Breast Neoplasms - metabolism ; Cell Line, Tumor ; DNA - chemistry ; DNA - genetics ; Equipment Design ; Equipment Failure Analysis ; Fundamental and applied biological sciences. Psychology ; Gene Expression Profiling - instrumentation ; Gold nanoparticle ; Hairpin DNA ; Humans ; Imaging ; Inverted Repeat Sequences - genetics ; Molecular Probe Techniques - instrumentation ; Molecular Probes ; Reproducibility of Results ; Sensitivity and Specificity ; STAT5 Transcription Factor - genetics ; STAT5 Transcription Factor - metabolism ; STAT5B mRNA ; Visual detection</subject><ispartof>Biosensors & bioelectronics, 2013-03, Vol.41, p.71-77</ispartof><rights>2012 Elsevier B.V.</rights><rights>2014 INIST-CNRS</rights><rights>Copyright © 2012 Elsevier B.V. All rights reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c423t-52b1a0548759195acd2877aaa241e54ed9d04999876bb2ace081880e2247e39c3</citedby><cites>FETCH-LOGICAL-c423t-52b1a0548759195acd2877aaa241e54ed9d04999876bb2ace081880e2247e39c3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1016/j.bios.2012.06.062$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,776,780,3536,27903,27904,45974</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=26924522$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/23122230$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Xue, Jianpeng</creatorcontrib><creatorcontrib>Shan, Lingling</creatorcontrib><creatorcontrib>Chen, Haiyan</creatorcontrib><creatorcontrib>Li, Yang</creatorcontrib><creatorcontrib>Zhu, Hongyan</creatorcontrib><creatorcontrib>Deng, Dawei</creatorcontrib><creatorcontrib>Qian, Zhiyu</creatorcontrib><creatorcontrib>Achilefu, Samuel</creatorcontrib><creatorcontrib>Gu, Yueqing</creatorcontrib><title>Visual detection of STAT5B gene expression in living cell using the hairpin DNA modified gold nanoparticle beacon</title><title>Biosensors & bioelectronics</title><addtitle>Biosens Bioelectron</addtitle><description>Signal transducer and activator of transcription 5B (STAT5B) is an important protein in JAK-STAT signaling pathway that is responsible for the metastasis and proliferation of tumor cells. Determination of the STAT5B messenger Ribonucleic Acid (mRNA) relating to the STAT5B expression provides insight into the mechanism of tumor progression. In this study, we designed and used a special hairpin deoxyribonucleic acid (DNA) for human STAT5B mRNA to functionalize gold nanoparticles, which served as a beacon for detecting human STAT5B expression. Up to 90% quenching efficiency was achieved. Upon hybridizing with the target mRNA, the hairpin DNA modified gold nanoparticle beacons (hDAuNP beacons) release the fluorophores attached at 5′ end of the oligonucleotide sequence. The fluorescence properties of the beacon before and after the hybridization with the complementary DNA were confirmed in vitro. The stability of hDAuNP beacons against degradation by DNase I and GSH indicated that the prepared beacon is stable inside cells. The detected fluorescence in MCF-7 cancer cells correlates with the specific STAT5B mRNA expression, which is consistent with the result from PCR measurement. Fluorescence microscopy showed that the hDAuNP beacons internalized in cells without using transfection agents, with intracellular distribution in the cytoplasm rather than the nucleus. The results demonstrated that this beacon could directly provide quantitative measurement of the intracellular STAT5B mRNA in living cells. Compared to the previous approaches, this beacon has advantages of higher target to background ratio of detection and an increased resistance to nuclease degradation. The strategy reported in this study is a promising approach for the intracellular measurement of RNA or protein expression in living cells, and has great potential in the study of drug screening and discovery.
► The special sequence of hairpin DNA for human STAT5B mRNA was designed by bioinformatical method. ► The quenching efficiency up to 90%. ► The prepared beacon is stable inside cells. ► The beacons were uptaken by cell without any transfection agents. ► Using this beacon, the expression of the STAT5B gene was successfully detected in living MCF-7 cells.</description><subject>Beacon</subject><subject>Biological and medical sciences</subject><subject>Biosensing Techniques - instrumentation</subject><subject>Biotechnology</subject><subject>Breast Neoplasms - genetics</subject><subject>Breast Neoplasms - metabolism</subject><subject>Cell Line, Tumor</subject><subject>DNA - chemistry</subject><subject>DNA - genetics</subject><subject>Equipment Design</subject><subject>Equipment Failure Analysis</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Gene Expression Profiling - instrumentation</subject><subject>Gold nanoparticle</subject><subject>Hairpin DNA</subject><subject>Humans</subject><subject>Imaging</subject><subject>Inverted Repeat Sequences - genetics</subject><subject>Molecular Probe Techniques - instrumentation</subject><subject>Molecular Probes</subject><subject>Reproducibility of Results</subject><subject>Sensitivity and Specificity</subject><subject>STAT5 Transcription Factor - genetics</subject><subject>STAT5 Transcription Factor - metabolism</subject><subject>STAT5B mRNA</subject><subject>Visual detection</subject><issn>0956-5663</issn><issn>1873-4235</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2013</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp9kU9v1DAQxS1ERbeFL8AB-YLEJYs9iZNY4rKU8keq2kMXrpZjT7ZeZe3UTir49jjaBW5II81I85unpzeEvOZszRmv3-_XnQtpDYzDmtW54BlZ8bYpiwpK8ZysmBR1Ieq6PCcXKe0ZYw2X7AU5h5IDQMlW5PGHS7MeqMUJzeSCp6Gn99vNVnykO_RI8ecYMaVl4zwd3JPzO2pwGOiclnF6QPqgXRzz9tPthh6Cdb1DS3dhsNRrH0YdJ2cGpB1qE_xLctbrIeGrU78k3z9fb6--Fjd3X75dbW4Kk91PhYCOayaqthGSS6GNhbZptNZQcRQVWmlZJaVsm7rrQBtkLW9bhgBVg6U05SV5d9QdY3icMU3q4NJiXHsMc1IcKiYZ51WTUTiiJoaUIvZqjO6g4y_FmVqiVnu1RK2WqBWrc0E-enPSn7sD2r8nf7LNwNsToJPRQx-1Ny7942oJlYBF6MORw5zGk8OoknHoDVoX80-UDe5_Pn4DbQebzw</recordid><startdate>20130315</startdate><enddate>20130315</enddate><creator>Xue, Jianpeng</creator><creator>Shan, Lingling</creator><creator>Chen, Haiyan</creator><creator>Li, Yang</creator><creator>Zhu, Hongyan</creator><creator>Deng, Dawei</creator><creator>Qian, Zhiyu</creator><creator>Achilefu, Samuel</creator><creator>Gu, Yueqing</creator><general>Elsevier B.V</general><general>Elsevier</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>20130315</creationdate><title>Visual detection of STAT5B gene expression in living cell using the hairpin DNA modified gold nanoparticle beacon</title><author>Xue, Jianpeng ; Shan, Lingling ; Chen, Haiyan ; Li, Yang ; Zhu, Hongyan ; Deng, Dawei ; Qian, Zhiyu ; Achilefu, Samuel ; Gu, Yueqing</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c423t-52b1a0548759195acd2877aaa241e54ed9d04999876bb2ace081880e2247e39c3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2013</creationdate><topic>Beacon</topic><topic>Biological and medical sciences</topic><topic>Biosensing Techniques - instrumentation</topic><topic>Biotechnology</topic><topic>Breast Neoplasms - genetics</topic><topic>Breast Neoplasms - metabolism</topic><topic>Cell Line, Tumor</topic><topic>DNA - chemistry</topic><topic>DNA - genetics</topic><topic>Equipment Design</topic><topic>Equipment Failure Analysis</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Gene Expression Profiling - instrumentation</topic><topic>Gold nanoparticle</topic><topic>Hairpin DNA</topic><topic>Humans</topic><topic>Imaging</topic><topic>Inverted Repeat Sequences - genetics</topic><topic>Molecular Probe Techniques - instrumentation</topic><topic>Molecular Probes</topic><topic>Reproducibility of Results</topic><topic>Sensitivity and Specificity</topic><topic>STAT5 Transcription Factor - genetics</topic><topic>STAT5 Transcription Factor - metabolism</topic><topic>STAT5B mRNA</topic><topic>Visual detection</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Xue, Jianpeng</creatorcontrib><creatorcontrib>Shan, Lingling</creatorcontrib><creatorcontrib>Chen, Haiyan</creatorcontrib><creatorcontrib>Li, Yang</creatorcontrib><creatorcontrib>Zhu, Hongyan</creatorcontrib><creatorcontrib>Deng, Dawei</creatorcontrib><creatorcontrib>Qian, Zhiyu</creatorcontrib><creatorcontrib>Achilefu, Samuel</creatorcontrib><creatorcontrib>Gu, Yueqing</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Biosensors & bioelectronics</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Xue, Jianpeng</au><au>Shan, Lingling</au><au>Chen, Haiyan</au><au>Li, Yang</au><au>Zhu, Hongyan</au><au>Deng, Dawei</au><au>Qian, Zhiyu</au><au>Achilefu, Samuel</au><au>Gu, Yueqing</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Visual detection of STAT5B gene expression in living cell using the hairpin DNA modified gold nanoparticle beacon</atitle><jtitle>Biosensors & bioelectronics</jtitle><addtitle>Biosens Bioelectron</addtitle><date>2013-03-15</date><risdate>2013</risdate><volume>41</volume><spage>71</spage><epage>77</epage><pages>71-77</pages><issn>0956-5663</issn><eissn>1873-4235</eissn><abstract>Signal transducer and activator of transcription 5B (STAT5B) is an important protein in JAK-STAT signaling pathway that is responsible for the metastasis and proliferation of tumor cells. Determination of the STAT5B messenger Ribonucleic Acid (mRNA) relating to the STAT5B expression provides insight into the mechanism of tumor progression. In this study, we designed and used a special hairpin deoxyribonucleic acid (DNA) for human STAT5B mRNA to functionalize gold nanoparticles, which served as a beacon for detecting human STAT5B expression. Up to 90% quenching efficiency was achieved. Upon hybridizing with the target mRNA, the hairpin DNA modified gold nanoparticle beacons (hDAuNP beacons) release the fluorophores attached at 5′ end of the oligonucleotide sequence. The fluorescence properties of the beacon before and after the hybridization with the complementary DNA were confirmed in vitro. The stability of hDAuNP beacons against degradation by DNase I and GSH indicated that the prepared beacon is stable inside cells. The detected fluorescence in MCF-7 cancer cells correlates with the specific STAT5B mRNA expression, which is consistent with the result from PCR measurement. Fluorescence microscopy showed that the hDAuNP beacons internalized in cells without using transfection agents, with intracellular distribution in the cytoplasm rather than the nucleus. The results demonstrated that this beacon could directly provide quantitative measurement of the intracellular STAT5B mRNA in living cells. Compared to the previous approaches, this beacon has advantages of higher target to background ratio of detection and an increased resistance to nuclease degradation. The strategy reported in this study is a promising approach for the intracellular measurement of RNA or protein expression in living cells, and has great potential in the study of drug screening and discovery.
► The special sequence of hairpin DNA for human STAT5B mRNA was designed by bioinformatical method. ► The quenching efficiency up to 90%. ► The prepared beacon is stable inside cells. ► The beacons were uptaken by cell without any transfection agents. ► Using this beacon, the expression of the STAT5B gene was successfully detected in living MCF-7 cells.</abstract><cop>Kidlington</cop><pub>Elsevier B.V</pub><pmid>23122230</pmid><doi>10.1016/j.bios.2012.06.062</doi><tpages>7</tpages></addata></record> |
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subjects | Beacon Biological and medical sciences Biosensing Techniques - instrumentation Biotechnology Breast Neoplasms - genetics Breast Neoplasms - metabolism Cell Line, Tumor DNA - chemistry DNA - genetics Equipment Design Equipment Failure Analysis Fundamental and applied biological sciences. Psychology Gene Expression Profiling - instrumentation Gold nanoparticle Hairpin DNA Humans Imaging Inverted Repeat Sequences - genetics Molecular Probe Techniques - instrumentation Molecular Probes Reproducibility of Results Sensitivity and Specificity STAT5 Transcription Factor - genetics STAT5 Transcription Factor - metabolism STAT5B mRNA Visual detection |
title | Visual detection of STAT5B gene expression in living cell using the hairpin DNA modified gold nanoparticle beacon |
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