Comparative proteomic profiles of Pinus monticola needles during early compatible and incompatible interactions with Cronartium ribicola
The proteomic profiles of primary needles from Cr2-resistant and cr2-susceptible Pinus montícola seedlings were analysed post Cronartium ribicola inoculation by 2-DE. One hundred-and-five protein spots exhibiting significant differential expression were identified using LCMS/MS. Functional classific...
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| Veröffentlicht in: | Planta 2012-12, Vol.236 (6), p.1725-1746 |
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| description | The proteomic profiles of primary needles from Cr2-resistant and cr2-susceptible Pinus montícola seedlings were analysed post Cronartium ribicola inoculation by 2-DE. One hundred-and-five protein spots exhibiting significant differential expression were identified using LCMS/MS. Functional classification showed that the most numerous proteins are involved in defence signalling, oxidative burst, metabolic pathways, and other physiological processes. Our results revealed that differential expression of proteins in response to C. ribicola inoculation was genotypeand infection-stage dependent. Responsive proteins in resistant seedlings with incompatible white pine blister rust (WPBR) interaction included such well-characterized proteins as heat shock proteins (HSPs), reactive oxygen species (ROS) scavenging enzymes, and intermediate factors functioning in the signal transduction pathways triggered by well-known plant R genes, as well as new candidates in plant defence like sugar epimerase, GTP-binding proteins, and chloroplastic ribonucleoproteins. Fewer proteins were regulated in susceptible seedlings; most of them were in common with resistant seedlings and related to photosynthesis among others. Quantitative RT-PCR analysis confirmed HSP-and ROS-related genes played an important role in host defence in response to ribicola infection. To the best of our knowledge, this is the first comparative proteomics study on WPBR interactions at the early stages of host defence, which provides a reference proteomic profile for other five-needle pines as well as resistance candidates for further understanding of host resistance in the WPBR pathosystem. |
| doi_str_mv | 10.1007/s00425-012-1715-x |
| format | Article |
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M.</creator><creatorcontrib>Zamany, Arezoo ; Liu, Jun-Jun ; Ekramoddoullah, Abul K. M.</creatorcontrib><description>The proteomic profiles of primary needles from Cr2-resistant and cr2-susceptible Pinus montícola seedlings were analysed post Cronartium ribicola inoculation by 2-DE. One hundred-and-five protein spots exhibiting significant differential expression were identified using LCMS/MS. Functional classification showed that the most numerous proteins are involved in defence signalling, oxidative burst, metabolic pathways, and other physiological processes. Our results revealed that differential expression of proteins in response to C. ribicola inoculation was genotypeand infection-stage dependent. Responsive proteins in resistant seedlings with incompatible white pine blister rust (WPBR) interaction included such well-characterized proteins as heat shock proteins (HSPs), reactive oxygen species (ROS) scavenging enzymes, and intermediate factors functioning in the signal transduction pathways triggered by well-known plant R genes, as well as new candidates in plant defence like sugar epimerase, GTP-binding proteins, and chloroplastic ribonucleoproteins. Fewer proteins were regulated in susceptible seedlings; most of them were in common with resistant seedlings and related to photosynthesis among others. Quantitative RT-PCR analysis confirmed HSP-and ROS-related genes played an important role in host defence in response to ribicola infection. To the best of our knowledge, this is the first comparative proteomics study on WPBR interactions at the early stages of host defence, which provides a reference proteomic profile for other five-needle pines as well as resistance candidates for further understanding of host resistance in the WPBR pathosystem.</description><identifier>ISSN: 0032-0935</identifier><identifier>EISSN: 1432-2048</identifier><identifier>DOI: 10.1007/s00425-012-1715-x</identifier><identifier>PMID: 22868574</identifier><identifier>CODEN: PLANAB</identifier><language>eng</language><publisher>Berlin/Heidelberg: Springer-Verlag</publisher><subject>Agriculture ; Basidiomycota - physiology ; Biological and medical sciences ; Biomedical and Life Sciences ; Chromatography, Liquid ; Ecology ; Forestry ; Fundamental and applied biological sciences. Psychology ; Fungal plant pathogens ; Gene expression regulation ; Gene Expression Regulation, Plant ; Genotype ; Host-Pathogen Interactions ; Infections ; Inoculation ; Life Sciences ; Mutation ; Original Article ; Pathogens ; Photosynthesis ; Phytopathology. Animal pests. Plant and forest protection ; Pine needles ; Pine trees ; Pinus - genetics ; Pinus - immunology ; Pinus - microbiology ; Pinus - physiology ; Plant Diseases - immunology ; Plant Diseases - microbiology ; Plant Immunity ; Plant Leaves - genetics ; Plant Leaves - immunology ; Plant Leaves - microbiology ; Plant Leaves - physiology ; Plant Proteins - genetics ; Plant Proteins - metabolism ; Plant Sciences ; Plants ; Proteins ; Proteome ; Proteomics ; Reactive oxygen species ; RNA, Messenger - genetics ; RNA, Plant - genetics ; Rust fungi ; Seedlings ; Seedlings - genetics ; Seedlings - immunology ; Seedlings - microbiology ; Seedlings - physiology ; Tandem Mass Spectrometry ; Time Factors ; Two-Dimensional Difference Gel Electrophoresis</subject><ispartof>Planta, 2012-12, Vol.236 (6), p.1725-1746</ispartof><rights>Her Majesty the Queen in Right of Canada 2012</rights><rights>2014 INIST-CNRS</rights><rights>Springer-Verlag Berlin Heidelberg 2012</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c457t-f51bffa6a3c9c3f00ebe89442a7342bf9e67124afee12c30d8ccfa8d921fa56e3</citedby><cites>FETCH-LOGICAL-c457t-f51bffa6a3c9c3f00ebe89442a7342bf9e67124afee12c30d8ccfa8d921fa56e3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.jstor.org/stable/pdf/43563891$$EPDF$$P50$$Gjstor$$H</linktopdf><linktohtml>$$Uhttps://www.jstor.org/stable/43563891$$EHTML$$P50$$Gjstor$$H</linktohtml><link.rule.ids>314,777,781,800,27905,27906,41469,42538,51300,57998,58231</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=26619899$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/22868574$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Zamany, Arezoo</creatorcontrib><creatorcontrib>Liu, Jun-Jun</creatorcontrib><creatorcontrib>Ekramoddoullah, Abul K. M.</creatorcontrib><title>Comparative proteomic profiles of Pinus monticola needles during early compatible and incompatible interactions with Cronartium ribicola</title><title>Planta</title><addtitle>Planta</addtitle><addtitle>Planta</addtitle><description>The proteomic profiles of primary needles from Cr2-resistant and cr2-susceptible Pinus montícola seedlings were analysed post Cronartium ribicola inoculation by 2-DE. One hundred-and-five protein spots exhibiting significant differential expression were identified using LCMS/MS. Functional classification showed that the most numerous proteins are involved in defence signalling, oxidative burst, metabolic pathways, and other physiological processes. Our results revealed that differential expression of proteins in response to C. ribicola inoculation was genotypeand infection-stage dependent. Responsive proteins in resistant seedlings with incompatible white pine blister rust (WPBR) interaction included such well-characterized proteins as heat shock proteins (HSPs), reactive oxygen species (ROS) scavenging enzymes, and intermediate factors functioning in the signal transduction pathways triggered by well-known plant R genes, as well as new candidates in plant defence like sugar epimerase, GTP-binding proteins, and chloroplastic ribonucleoproteins. Fewer proteins were regulated in susceptible seedlings; most of them were in common with resistant seedlings and related to photosynthesis among others. Quantitative RT-PCR analysis confirmed HSP-and ROS-related genes played an important role in host defence in response to ribicola infection. To the best of our knowledge, this is the first comparative proteomics study on WPBR interactions at the early stages of host defence, which provides a reference proteomic profile for other five-needle pines as well as resistance candidates for further understanding of host resistance in the WPBR pathosystem.</description><subject>Agriculture</subject><subject>Basidiomycota - physiology</subject><subject>Biological and medical sciences</subject><subject>Biomedical and Life Sciences</subject><subject>Chromatography, Liquid</subject><subject>Ecology</subject><subject>Forestry</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Fungal plant pathogens</subject><subject>Gene expression regulation</subject><subject>Gene Expression Regulation, Plant</subject><subject>Genotype</subject><subject>Host-Pathogen Interactions</subject><subject>Infections</subject><subject>Inoculation</subject><subject>Life Sciences</subject><subject>Mutation</subject><subject>Original Article</subject><subject>Pathogens</subject><subject>Photosynthesis</subject><subject>Phytopathology. Animal pests. Plant and forest protection</subject><subject>Pine needles</subject><subject>Pine trees</subject><subject>Pinus - genetics</subject><subject>Pinus - immunology</subject><subject>Pinus - microbiology</subject><subject>Pinus - physiology</subject><subject>Plant Diseases - immunology</subject><subject>Plant Diseases - microbiology</subject><subject>Plant Immunity</subject><subject>Plant Leaves - genetics</subject><subject>Plant Leaves - immunology</subject><subject>Plant Leaves - microbiology</subject><subject>Plant Leaves - physiology</subject><subject>Plant Proteins - genetics</subject><subject>Plant Proteins - metabolism</subject><subject>Plant Sciences</subject><subject>Plants</subject><subject>Proteins</subject><subject>Proteome</subject><subject>Proteomics</subject><subject>Reactive oxygen species</subject><subject>RNA, Messenger - genetics</subject><subject>RNA, Plant - genetics</subject><subject>Rust fungi</subject><subject>Seedlings</subject><subject>Seedlings - genetics</subject><subject>Seedlings - immunology</subject><subject>Seedlings - microbiology</subject><subject>Seedlings - physiology</subject><subject>Tandem Mass Spectrometry</subject><subject>Time Factors</subject><subject>Two-Dimensional Difference Gel Electrophoresis</subject><issn>0032-0935</issn><issn>1432-2048</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2012</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNp9kU-L1TAUxYMoznP0A7hQAiK4qeZfm2YpD__BgC50XW7TG82jTZ5JOs58Az-2rX2OgwtXueT-zskJh5DHnL3kjOlXmTEl6opxUXHN6-rqDtlxJUUlmGrvkh1jy8yMrM_Ig5wPjC1Lre-TMyHapq212pGf-zgdIUHxl0iPKRaMk7fr5PyImUZHP_kwZzrFULyNI9CAOKyrYU4-fKUIabymdrUpvh-RQhioD7cufCiYwBYfQ6Y_fPlG9ykGSMXPE02-_237kNxzMGZ8dDrPyZe3bz7v31cXH9992L--qKyqdalczXvnoAFpjZWOMeyxNUoJ0FKJ3hlsNBcKHCIXVrKhtdZBOxjBHdQNynPyYvNdvvh9xly6yWeL4wgB45w7znXbaKNrs6DP_kEPcU5hSbdSrGGCSb5QfKNsijkndN0x-QnSdcdZt9bUbTV1S03dWlN3tWienpznfsLhRvGnlwV4fgIgWxhdgmB9_ss1DTetWSOKjcvHtQxMtyL-5_Unm-iQS0w3pkrWjWwNl78A0b-4MA</recordid><startdate>20121201</startdate><enddate>20121201</enddate><creator>Zamany, Arezoo</creator><creator>Liu, Jun-Jun</creator><creator>Ekramoddoullah, Abul K. 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M.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Comparative proteomic profiles of Pinus monticola needles during early compatible and incompatible interactions with Cronartium ribicola</atitle><jtitle>Planta</jtitle><stitle>Planta</stitle><addtitle>Planta</addtitle><date>2012-12-01</date><risdate>2012</risdate><volume>236</volume><issue>6</issue><spage>1725</spage><epage>1746</epage><pages>1725-1746</pages><issn>0032-0935</issn><eissn>1432-2048</eissn><coden>PLANAB</coden><abstract>The proteomic profiles of primary needles from Cr2-resistant and cr2-susceptible Pinus montícola seedlings were analysed post Cronartium ribicola inoculation by 2-DE. One hundred-and-five protein spots exhibiting significant differential expression were identified using LCMS/MS. Functional classification showed that the most numerous proteins are involved in defence signalling, oxidative burst, metabolic pathways, and other physiological processes. Our results revealed that differential expression of proteins in response to C. ribicola inoculation was genotypeand infection-stage dependent. Responsive proteins in resistant seedlings with incompatible white pine blister rust (WPBR) interaction included such well-characterized proteins as heat shock proteins (HSPs), reactive oxygen species (ROS) scavenging enzymes, and intermediate factors functioning in the signal transduction pathways triggered by well-known plant R genes, as well as new candidates in plant defence like sugar epimerase, GTP-binding proteins, and chloroplastic ribonucleoproteins. Fewer proteins were regulated in susceptible seedlings; most of them were in common with resistant seedlings and related to photosynthesis among others. Quantitative RT-PCR analysis confirmed HSP-and ROS-related genes played an important role in host defence in response to ribicola infection. To the best of our knowledge, this is the first comparative proteomics study on WPBR interactions at the early stages of host defence, which provides a reference proteomic profile for other five-needle pines as well as resistance candidates for further understanding of host resistance in the WPBR pathosystem.</abstract><cop>Berlin/Heidelberg</cop><pub>Springer-Verlag</pub><pmid>22868574</pmid><doi>10.1007/s00425-012-1715-x</doi><tpages>22</tpages></addata></record> |
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| subjects | Agriculture Basidiomycota - physiology Biological and medical sciences Biomedical and Life Sciences Chromatography, Liquid Ecology Forestry Fundamental and applied biological sciences. Psychology Fungal plant pathogens Gene expression regulation Gene Expression Regulation, Plant Genotype Host-Pathogen Interactions Infections Inoculation Life Sciences Mutation Original Article Pathogens Photosynthesis Phytopathology. Animal pests. Plant and forest protection Pine needles Pine trees Pinus - genetics Pinus - immunology Pinus - microbiology Pinus - physiology Plant Diseases - immunology Plant Diseases - microbiology Plant Immunity Plant Leaves - genetics Plant Leaves - immunology Plant Leaves - microbiology Plant Leaves - physiology Plant Proteins - genetics Plant Proteins - metabolism Plant Sciences Plants Proteins Proteome Proteomics Reactive oxygen species RNA, Messenger - genetics RNA, Plant - genetics Rust fungi Seedlings Seedlings - genetics Seedlings - immunology Seedlings - microbiology Seedlings - physiology Tandem Mass Spectrometry Time Factors Two-Dimensional Difference Gel Electrophoresis |
| title | Comparative proteomic profiles of Pinus monticola needles during early compatible and incompatible interactions with Cronartium ribicola |
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