Influence diagnostics in linear and nonlinear mixed-effects models with censored data
HIV RNA viral load measures are often subjected to some upper and lower detection limits depending on the quantification assays, and consequently the responses are either left or right censored. Linear and nonlinear mixed-effects models, with modifications to accommodate censoring (LMEC and NLMEC),...
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Veröffentlicht in: | Computational statistics & data analysis 2013-01, Vol.57 (1), p.450-464 |
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creator | Matos, Larissa A. Lachos, Victor H. Balakrishnan, N. Labra, Filidor V. |
description | HIV RNA viral load measures are often subjected to some upper and lower detection limits depending on the quantification assays, and consequently the responses are either left or right censored. Linear and nonlinear mixed-effects models, with modifications to accommodate censoring (LMEC and NLMEC), are routinely used to analyze this type of data. Recently, Vaida and Liu (2009) proposed an exact EM-type algorithm for LMEC/NLMEC, called the SAGE algorithm (Meng and Van Dyk, 1997), that uses closed-form expressions at the E-step, as opposed to Monte Carlo simulations. Motivated by this algorithm, we propose here an exact ECM algorithm (Meng and Rubin, 1993) for LMEC/NLMEC, which enables us to develop local influence analysis for mixed-effects models on the basis of conditional expectation of the complete-data log-likelihood function. This is because the observed data log-likelihood function associated with the proposed model is somewhat complex which makes it difficult to directly apply the approach of Cook (1977, 1986). Some useful perturbation schemes are also discussed. Finally, the results obtained from the analyses of two HIV AIDS studies on viral loads are presented to illustrate the newly developed methodology. |
doi_str_mv | 10.1016/j.csda.2012.06.021 |
format | Article |
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Linear and nonlinear mixed-effects models, with modifications to accommodate censoring (LMEC and NLMEC), are routinely used to analyze this type of data. Recently, Vaida and Liu (2009) proposed an exact EM-type algorithm for LMEC/NLMEC, called the SAGE algorithm (Meng and Van Dyk, 1997), that uses closed-form expressions at the E-step, as opposed to Monte Carlo simulations. Motivated by this algorithm, we propose here an exact ECM algorithm (Meng and Rubin, 1993) for LMEC/NLMEC, which enables us to develop local influence analysis for mixed-effects models on the basis of conditional expectation of the complete-data log-likelihood function. This is because the observed data log-likelihood function associated with the proposed model is somewhat complex which makes it difficult to directly apply the approach of Cook (1977, 1986). Some useful perturbation schemes are also discussed. 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Linear and nonlinear mixed-effects models, with modifications to accommodate censoring (LMEC and NLMEC), are routinely used to analyze this type of data. Recently, Vaida and Liu (2009) proposed an exact EM-type algorithm for LMEC/NLMEC, called the SAGE algorithm (Meng and Van Dyk, 1997), that uses closed-form expressions at the E-step, as opposed to Monte Carlo simulations. Motivated by this algorithm, we propose here an exact ECM algorithm (Meng and Rubin, 1993) for LMEC/NLMEC, which enables us to develop local influence analysis for mixed-effects models on the basis of conditional expectation of the complete-data log-likelihood function. This is because the observed data log-likelihood function associated with the proposed model is somewhat complex which makes it difficult to directly apply the approach of Cook (1977, 1986). Some useful perturbation schemes are also discussed. Finally, the results obtained from the analyses of two HIV AIDS studies on viral loads are presented to illustrate the newly developed methodology.</description><subject>Algorithms</subject><subject>Censored data</subject><subject>Computer simulation</subject><subject>EM algorithm</subject><subject>Exact solutions</subject><subject>HIV</subject><subject>HIV viral load</subject><subject>Influential observations</subject><subject>Linear and nonlinear mixed models</subject><subject>Mathematical analysis</subject><subject>Mathematical models</subject><subject>Monte Carlo methods</subject><subject>Nonlinearity</subject><issn>0167-9473</issn><issn>1872-7352</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2013</creationdate><recordtype>article</recordtype><recordid>eNp9kMtOwzAQRS0EEqXwA6y8ZJPgR2InEhtU8ahUiQ1dW449BleJXeyUx9-TqKxZje7o3JHmIHRNSUkJFbe70mSrS0YoK4koCaMnaEEbyQrJa3aKFhMki7aS_Bxd5LwjhLBKNgu0XQfXHyAYwNbrtxDz6E3GPuDeB9AJ62BxiOEvDf4bbAHOgRkzHqKFPuMvP75jAyHHBBZbPepLdOZ0n-Hqby7R9vHhdfVcbF6e1qv7TWE452OhW9lAIy2XjeC1aKclE0445mRlqrrtqtoy0UnGeVVrsJx3pJUd65irm0ZzvkQ3x7v7FD8OkEc1-Gyg73WAeMiKUi5qwSSrJpQdUZNizgmc2ic_6PSjKFGzQ7VTs0M1O1REqMnhVLo7lqY34dNDUtn4WZb1aTKgbPT_1X8Bj3F6Bg</recordid><startdate>201301</startdate><enddate>201301</enddate><creator>Matos, Larissa A.</creator><creator>Lachos, Victor H.</creator><creator>Balakrishnan, N.</creator><creator>Labra, Filidor V.</creator><general>Elsevier B.V</general><scope>AAYXX</scope><scope>CITATION</scope><scope>7SC</scope><scope>8FD</scope><scope>JQ2</scope><scope>L7M</scope><scope>L~C</scope><scope>L~D</scope></search><sort><creationdate>201301</creationdate><title>Influence diagnostics in linear and nonlinear mixed-effects models with censored data</title><author>Matos, Larissa A. ; Lachos, Victor H. ; Balakrishnan, N. ; Labra, Filidor V.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c333t-a978e87d3786356933326f6f2f74c459b45d26b723345aed33b097b2b2f588a33</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2013</creationdate><topic>Algorithms</topic><topic>Censored data</topic><topic>Computer simulation</topic><topic>EM algorithm</topic><topic>Exact solutions</topic><topic>HIV</topic><topic>HIV viral load</topic><topic>Influential observations</topic><topic>Linear and nonlinear mixed models</topic><topic>Mathematical analysis</topic><topic>Mathematical models</topic><topic>Monte Carlo methods</topic><topic>Nonlinearity</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Matos, Larissa A.</creatorcontrib><creatorcontrib>Lachos, Victor H.</creatorcontrib><creatorcontrib>Balakrishnan, N.</creatorcontrib><creatorcontrib>Labra, Filidor V.</creatorcontrib><collection>CrossRef</collection><collection>Computer and Information Systems Abstracts</collection><collection>Technology Research Database</collection><collection>ProQuest Computer Science Collection</collection><collection>Advanced Technologies Database with Aerospace</collection><collection>Computer and Information Systems Abstracts Academic</collection><collection>Computer and Information Systems Abstracts Professional</collection><jtitle>Computational statistics & data analysis</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Matos, Larissa A.</au><au>Lachos, Victor H.</au><au>Balakrishnan, N.</au><au>Labra, Filidor V.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Influence diagnostics in linear and nonlinear mixed-effects models with censored data</atitle><jtitle>Computational statistics & data analysis</jtitle><date>2013-01</date><risdate>2013</risdate><volume>57</volume><issue>1</issue><spage>450</spage><epage>464</epage><pages>450-464</pages><issn>0167-9473</issn><eissn>1872-7352</eissn><abstract>HIV RNA viral load measures are often subjected to some upper and lower detection limits depending on the quantification assays, and consequently the responses are either left or right censored. Linear and nonlinear mixed-effects models, with modifications to accommodate censoring (LMEC and NLMEC), are routinely used to analyze this type of data. Recently, Vaida and Liu (2009) proposed an exact EM-type algorithm for LMEC/NLMEC, called the SAGE algorithm (Meng and Van Dyk, 1997), that uses closed-form expressions at the E-step, as opposed to Monte Carlo simulations. Motivated by this algorithm, we propose here an exact ECM algorithm (Meng and Rubin, 1993) for LMEC/NLMEC, which enables us to develop local influence analysis for mixed-effects models on the basis of conditional expectation of the complete-data log-likelihood function. This is because the observed data log-likelihood function associated with the proposed model is somewhat complex which makes it difficult to directly apply the approach of Cook (1977, 1986). Some useful perturbation schemes are also discussed. 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subjects | Algorithms Censored data Computer simulation EM algorithm Exact solutions HIV HIV viral load Influential observations Linear and nonlinear mixed models Mathematical analysis Mathematical models Monte Carlo methods Nonlinearity |
title | Influence diagnostics in linear and nonlinear mixed-effects models with censored data |
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