Aquimarina mytili sp. nov., isolated from the gut microflora of a mussel, Mytilus coruscus, and emended description of Aquimarina macrocephali
An orange, rod-shaped, gliding bacterium, designated strain PSC33(T), was isolated from the gut microflora of a mussel collected from Gwangyang Bay, South Sea (Republic of Korea). Cells were Gram-reaction-negative, strictly aerobic, and catalase- and oxidase-positive. The major fatty acids were iso-...
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| Veröffentlicht in: | International journal of systematic and evolutionary microbiology 2012-08, Vol.62 (Pt 8), p.1974-1979 |
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| container_end_page | 1979 |
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| container_issue | Pt 8 |
| container_start_page | 1974 |
| container_title | International journal of systematic and evolutionary microbiology |
| container_volume | 62 |
| creator | Park, Seong Chan Choe, Han Na Baik, Keun Sik Seong, Chi Nam |
| description | An orange, rod-shaped, gliding bacterium, designated strain PSC33(T), was isolated from the gut microflora of a mussel collected from Gwangyang Bay, South Sea (Republic of Korea). Cells were Gram-reaction-negative, strictly aerobic, and catalase- and oxidase-positive. The major fatty acids were iso-C(15:0), iso-C(17:0) 3-OH, iso-C(15:1) G, C(15:0) 3-OH and iso-C(17:1)ω9c. The only isoprenoid quinone was menaquinone-6 (MK-6). The DNA G+C content of strain PSC33(T) was 37.9 mol%. A phylogenetic tree based on 16S rRNA gene sequences showed that strain PSC33(T) formed an evolutionary lineage within the radiation encompassing members of the genus Aquimarina with Aquimarina macrocephali JAMB N27(T) as its nearest neighbour (96.3% sequence similarity). A number of phenotypic characteristics distinguished strain PSC33(T) from recognized members of the genus Aquimarina. On the basis of the data presented in this study, strain PSC33(T) is considered to represent a novel species of the genus Aquimarina, for which the name Aquimarina mytili sp. nov. is proposed. The type strain is PSC33(T) ( = KCTC 23302(T) = JCM 17454(T)). An emended description of A. macrocephali is also provided. |
| doi_str_mv | 10.1099/ijs.0.032904-0 |
| format | Article |
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Cells were Gram-reaction-negative, strictly aerobic, and catalase- and oxidase-positive. The major fatty acids were iso-C(15:0), iso-C(17:0) 3-OH, iso-C(15:1) G, C(15:0) 3-OH and iso-C(17:1)ω9c. The only isoprenoid quinone was menaquinone-6 (MK-6). The DNA G+C content of strain PSC33(T) was 37.9 mol%. A phylogenetic tree based on 16S rRNA gene sequences showed that strain PSC33(T) formed an evolutionary lineage within the radiation encompassing members of the genus Aquimarina with Aquimarina macrocephali JAMB N27(T) as its nearest neighbour (96.3% sequence similarity). A number of phenotypic characteristics distinguished strain PSC33(T) from recognized members of the genus Aquimarina. On the basis of the data presented in this study, strain PSC33(T) is considered to represent a novel species of the genus Aquimarina, for which the name Aquimarina mytili sp. nov. is proposed. The type strain is PSC33(T) ( = KCTC 23302(T) = JCM 17454(T)). An emended description of A. macrocephali is also provided.</description><identifier>ISSN: 1466-5026</identifier><identifier>EISSN: 1466-5034</identifier><identifier>DOI: 10.1099/ijs.0.032904-0</identifier><identifier>PMID: 22003036</identifier><language>eng</language><publisher>Reading: Society for General Microbiology</publisher><subject>Animals ; Bacterial Typing Techniques ; Bacteriology ; Base Composition ; Biological and medical sciences ; Bivalvia - microbiology ; DNA, Bacterial - genetics ; Fatty Acids - analysis ; Flavobacteriaceae - classification ; Flavobacteriaceae - genetics ; Flavobacteriaceae - isolation & purification ; Fundamental and applied biological sciences. Psychology ; Microbiology ; Molecular Sequence Data ; Phylogeny ; Republic of Korea ; RNA, Ribosomal, 16S - genetics ; Sequence Analysis, DNA ; Systematics ; Vitamin K 2 - analogs & derivatives ; Vitamin K 2 - analysis</subject><ispartof>International journal of systematic and evolutionary microbiology, 2012-08, Vol.62 (Pt 8), p.1974-1979</ispartof><rights>2014 INIST-CNRS</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c365t-71dbd9c55600ba805916adc2b779ae84c741620cae3cdd173f4b7c48203ca19b3</citedby><cites>FETCH-LOGICAL-c365t-71dbd9c55600ba805916adc2b779ae84c741620cae3cdd173f4b7c48203ca19b3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,3733,27901,27902</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=26224296$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/22003036$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Park, Seong Chan</creatorcontrib><creatorcontrib>Choe, Han Na</creatorcontrib><creatorcontrib>Baik, Keun Sik</creatorcontrib><creatorcontrib>Seong, Chi Nam</creatorcontrib><title>Aquimarina mytili sp. nov., isolated from the gut microflora of a mussel, Mytilus coruscus, and emended description of Aquimarina macrocephali</title><title>International journal of systematic and evolutionary microbiology</title><addtitle>Int J Syst Evol Microbiol</addtitle><description>An orange, rod-shaped, gliding bacterium, designated strain PSC33(T), was isolated from the gut microflora of a mussel collected from Gwangyang Bay, South Sea (Republic of Korea). Cells were Gram-reaction-negative, strictly aerobic, and catalase- and oxidase-positive. The major fatty acids were iso-C(15:0), iso-C(17:0) 3-OH, iso-C(15:1) G, C(15:0) 3-OH and iso-C(17:1)ω9c. The only isoprenoid quinone was menaquinone-6 (MK-6). The DNA G+C content of strain PSC33(T) was 37.9 mol%. A phylogenetic tree based on 16S rRNA gene sequences showed that strain PSC33(T) formed an evolutionary lineage within the radiation encompassing members of the genus Aquimarina with Aquimarina macrocephali JAMB N27(T) as its nearest neighbour (96.3% sequence similarity). A number of phenotypic characteristics distinguished strain PSC33(T) from recognized members of the genus Aquimarina. On the basis of the data presented in this study, strain PSC33(T) is considered to represent a novel species of the genus Aquimarina, for which the name Aquimarina mytili sp. nov. is proposed. The type strain is PSC33(T) ( = KCTC 23302(T) = JCM 17454(T)). An emended description of A. macrocephali is also provided.</description><subject>Animals</subject><subject>Bacterial Typing Techniques</subject><subject>Bacteriology</subject><subject>Base Composition</subject><subject>Biological and medical sciences</subject><subject>Bivalvia - microbiology</subject><subject>DNA, Bacterial - genetics</subject><subject>Fatty Acids - analysis</subject><subject>Flavobacteriaceae - classification</subject><subject>Flavobacteriaceae - genetics</subject><subject>Flavobacteriaceae - isolation & purification</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Microbiology</subject><subject>Molecular Sequence Data</subject><subject>Phylogeny</subject><subject>Republic of Korea</subject><subject>RNA, Ribosomal, 16S - genetics</subject><subject>Sequence Analysis, DNA</subject><subject>Systematics</subject><subject>Vitamin K 2 - analogs & derivatives</subject><subject>Vitamin K 2 - analysis</subject><issn>1466-5026</issn><issn>1466-5034</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2012</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNpNkUFv1DAQhS1URNuFa4_Il0ocNmFsJ876WFXQIhVxgXPk2E7ryolTT4zUP8FvxqtdSk8zsr73PDOPkAsGNQOlPvtHrKEGwRU0FbwhZ6yRsmpBNCcvPZen5BzxEaA8ALwjp5wDCBDyjPy5esp-0snPmk7Pqw-e4lLTOf6ut9RjDHp1lo4pTnR9cPQ-r3TyJsUxxKRpHGmRZUQXtvT7Xp6RmpgymoxbqmdL3eRmWyysQ5P8svo472Wvv9XFz7jlQQf_nrwddUD34Vg35NfXLz-vb6u7Hzffrq_uKiNku1Yds4NVpm3LOoPeQauY1NbwoeuUdrvGdA2THIx2wljLOjE2Q2eaHQdhNFOD2JBPB98lxafscO0nj8aFoGcXM_YMBGOtVGpX0PqAlikRkxv7Je1Hfy5Qv8-gLxn00B8yKGVDPh698zA5-4L_O3oBLo-ARqPDmPRsPP7nJOcNV1L8BfTckUs</recordid><startdate>20120801</startdate><enddate>20120801</enddate><creator>Park, Seong Chan</creator><creator>Choe, Han Na</creator><creator>Baik, Keun Sik</creator><creator>Seong, Chi Nam</creator><general>Society for General Microbiology</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>20120801</creationdate><title>Aquimarina mytili sp. nov., isolated from the gut microflora of a mussel, Mytilus coruscus, and emended description of Aquimarina macrocephali</title><author>Park, Seong Chan ; Choe, Han Na ; Baik, Keun Sik ; Seong, Chi Nam</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c365t-71dbd9c55600ba805916adc2b779ae84c741620cae3cdd173f4b7c48203ca19b3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2012</creationdate><topic>Animals</topic><topic>Bacterial Typing Techniques</topic><topic>Bacteriology</topic><topic>Base Composition</topic><topic>Biological and medical sciences</topic><topic>Bivalvia - microbiology</topic><topic>DNA, Bacterial - genetics</topic><topic>Fatty Acids - analysis</topic><topic>Flavobacteriaceae - classification</topic><topic>Flavobacteriaceae - genetics</topic><topic>Flavobacteriaceae - isolation & purification</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Microbiology</topic><topic>Molecular Sequence Data</topic><topic>Phylogeny</topic><topic>Republic of Korea</topic><topic>RNA, Ribosomal, 16S - genetics</topic><topic>Sequence Analysis, DNA</topic><topic>Systematics</topic><topic>Vitamin K 2 - analogs & derivatives</topic><topic>Vitamin K 2 - analysis</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Park, Seong Chan</creatorcontrib><creatorcontrib>Choe, Han Na</creatorcontrib><creatorcontrib>Baik, Keun Sik</creatorcontrib><creatorcontrib>Seong, Chi Nam</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>International journal of systematic and evolutionary microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Park, Seong Chan</au><au>Choe, Han Na</au><au>Baik, Keun Sik</au><au>Seong, Chi Nam</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Aquimarina mytili sp. nov., isolated from the gut microflora of a mussel, Mytilus coruscus, and emended description of Aquimarina macrocephali</atitle><jtitle>International journal of systematic and evolutionary microbiology</jtitle><addtitle>Int J Syst Evol Microbiol</addtitle><date>2012-08-01</date><risdate>2012</risdate><volume>62</volume><issue>Pt 8</issue><spage>1974</spage><epage>1979</epage><pages>1974-1979</pages><issn>1466-5026</issn><eissn>1466-5034</eissn><abstract>An orange, rod-shaped, gliding bacterium, designated strain PSC33(T), was isolated from the gut microflora of a mussel collected from Gwangyang Bay, South Sea (Republic of Korea). Cells were Gram-reaction-negative, strictly aerobic, and catalase- and oxidase-positive. The major fatty acids were iso-C(15:0), iso-C(17:0) 3-OH, iso-C(15:1) G, C(15:0) 3-OH and iso-C(17:1)ω9c. The only isoprenoid quinone was menaquinone-6 (MK-6). The DNA G+C content of strain PSC33(T) was 37.9 mol%. A phylogenetic tree based on 16S rRNA gene sequences showed that strain PSC33(T) formed an evolutionary lineage within the radiation encompassing members of the genus Aquimarina with Aquimarina macrocephali JAMB N27(T) as its nearest neighbour (96.3% sequence similarity). A number of phenotypic characteristics distinguished strain PSC33(T) from recognized members of the genus Aquimarina. On the basis of the data presented in this study, strain PSC33(T) is considered to represent a novel species of the genus Aquimarina, for which the name Aquimarina mytili sp. nov. is proposed. The type strain is PSC33(T) ( = KCTC 23302(T) = JCM 17454(T)). An emended description of A. macrocephali is also provided.</abstract><cop>Reading</cop><pub>Society for General Microbiology</pub><pmid>22003036</pmid><doi>10.1099/ijs.0.032904-0</doi><tpages>6</tpages><oa>free_for_read</oa></addata></record> |
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| subjects | Animals Bacterial Typing Techniques Bacteriology Base Composition Biological and medical sciences Bivalvia - microbiology DNA, Bacterial - genetics Fatty Acids - analysis Flavobacteriaceae - classification Flavobacteriaceae - genetics Flavobacteriaceae - isolation & purification Fundamental and applied biological sciences. Psychology Microbiology Molecular Sequence Data Phylogeny Republic of Korea RNA, Ribosomal, 16S - genetics Sequence Analysis, DNA Systematics Vitamin K 2 - analogs & derivatives Vitamin K 2 - analysis |
| title | Aquimarina mytili sp. nov., isolated from the gut microflora of a mussel, Mytilus coruscus, and emended description of Aquimarina macrocephali |
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