In situ evaluation of the genotoxic potential of the river Nile: II. Detection of DNA strand-breakage and apoptosis in Oreochromis niloticus niloticus (Linnaeus, 1758) and Clarias gariepinus (Burchell, 1822)
This work is part of a wider eco-toxicological study proposed to evaluate the biological impact of contaminants along the whole course of the river Nile, Egypt. Here we present data on the presence of DNA strand-breaks and apoptotic cells assessed by use of comet and diffusion assays in erythrocytes...
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description | This work is part of a wider eco-toxicological study proposed to evaluate the biological impact of contaminants along the whole course of the river Nile, Egypt. Here we present data on the presence of DNA strand-breaks and apoptotic cells assessed by use of comet and diffusion assays in erythrocytes of Nile tilapia (Oreochromis niloticus niloticus) and African catfish (Clarias gariepinus). The results showed high degrees of DNA damage and increased frequencies of apoptotic nuclei in blood of fish collected from downstream compared with those sampled from upstream river Nile. Qualitative analysis revealed a shift in the frequency of DNA-damage classes towards higher damage levels correlating with the increasing pollution gradient. The degree of DNA damage measured by use of comet assay and diffusion assay exhibited seasonal variations. Both fish species showed significant increases in DNA damage during the summer. The results of our study indicated that the alkaline comet assay seems to be a useful technique for in situ genotoxic monitoring. At the same time the diffusion assay is sensitive enough to detect low frequencies of apoptotic nuclei. The results reveal species-specific differences in sensitivities, suggesting that Nile tilapia may serve as a more sensitive test species compared with the African catfish. Based on the outcome of the comet and diffusion assays, it can be concluded that the water quality of the river Nile with respect to the presence of genotoxic compounds needs to be improved, especially in its estuaries. As far as we know this is the first time that the comet and diffusion assays are used for genotoxic monitoring of the river Nile. |
doi_str_mv | 10.1016/j.mrgentox.2012.02.013 |
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Detection of DNA strand-breakage and apoptosis in Oreochromis niloticus niloticus (Linnaeus, 1758) and Clarias gariepinus (Burchell, 1822)</title><source>MEDLINE</source><source>Access via ScienceDirect (Elsevier)</source><creator>Osman, Alaa G.M. ; Abuel-Fadl, Khaled Y. ; Kloas, Werner</creator><creatorcontrib>Osman, Alaa G.M. ; Abuel-Fadl, Khaled Y. ; Kloas, Werner</creatorcontrib><description>This work is part of a wider eco-toxicological study proposed to evaluate the biological impact of contaminants along the whole course of the river Nile, Egypt. Here we present data on the presence of DNA strand-breaks and apoptotic cells assessed by use of comet and diffusion assays in erythrocytes of Nile tilapia (Oreochromis niloticus niloticus) and African catfish (Clarias gariepinus). The results showed high degrees of DNA damage and increased frequencies of apoptotic nuclei in blood of fish collected from downstream compared with those sampled from upstream river Nile. Qualitative analysis revealed a shift in the frequency of DNA-damage classes towards higher damage levels correlating with the increasing pollution gradient. The degree of DNA damage measured by use of comet assay and diffusion assay exhibited seasonal variations. Both fish species showed significant increases in DNA damage during the summer. The results of our study indicated that the alkaline comet assay seems to be a useful technique for in situ genotoxic monitoring. At the same time the diffusion assay is sensitive enough to detect low frequencies of apoptotic nuclei. The results reveal species-specific differences in sensitivities, suggesting that Nile tilapia may serve as a more sensitive test species compared with the African catfish. Based on the outcome of the comet and diffusion assays, it can be concluded that the water quality of the river Nile with respect to the presence of genotoxic compounds needs to be improved, especially in its estuaries. As far as we know this is the first time that the comet and diffusion assays are used for genotoxic monitoring of the river Nile.</description><identifier>ISSN: 1383-5718</identifier><identifier>ISSN: 0027-5107</identifier><identifier>EISSN: 1879-3592</identifier><identifier>DOI: 10.1016/j.mrgentox.2012.02.013</identifier><identifier>PMID: 22525358</identifier><language>eng</language><publisher>Netherlands: Elsevier B.V</publisher><subject>African catfish ; Animals ; Apoptosis ; Apoptosis - drug effects ; Brackish ; Catfishes - genetics ; Cichlids - genetics ; Clarias gariepinus ; Comet Assay ; Cytotoxicity ; Diffusion assay ; DNA Breaks - drug effects ; DNA damage ; Egypt ; Environmental Monitoring - methods ; Fish ; Freshwater ; Genotoxicity ; Mutagenicity Tests - methods ; Nile tilapia ; Oreochromis niloticus ; Oreochromis niloticus niloticus ; River Nile ; Rivers ; Seasons ; Species Specificity ; Toxicology ; Water Pollutants, Chemical - toxicity ; Water quality</subject><ispartof>Mutation research, 2012-08, Vol.747 (1), p.14-21</ispartof><rights>2012 Elsevier B.V.</rights><rights>Copyright © 2012 Elsevier B.V. All rights reserved.</rights><rights>Copyright Elsevier BV Aug 30, 2012</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c429t-b0d1971533ad7464a38e52dfa70d7eaf10df56dd4b8a60a4d53122ef605964c3</citedby><cites>FETCH-LOGICAL-c429t-b0d1971533ad7464a38e52dfa70d7eaf10df56dd4b8a60a4d53122ef605964c3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1016/j.mrgentox.2012.02.013$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>315,781,785,3551,27929,27930,46000</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/22525358$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Osman, Alaa G.M.</creatorcontrib><creatorcontrib>Abuel-Fadl, Khaled Y.</creatorcontrib><creatorcontrib>Kloas, Werner</creatorcontrib><title>In situ evaluation of the genotoxic potential of the river Nile: II. Detection of DNA strand-breakage and apoptosis in Oreochromis niloticus niloticus (Linnaeus, 1758) and Clarias gariepinus (Burchell, 1822)</title><title>Mutation research</title><addtitle>Mutat Res</addtitle><description>This work is part of a wider eco-toxicological study proposed to evaluate the biological impact of contaminants along the whole course of the river Nile, Egypt. Here we present data on the presence of DNA strand-breaks and apoptotic cells assessed by use of comet and diffusion assays in erythrocytes of Nile tilapia (Oreochromis niloticus niloticus) and African catfish (Clarias gariepinus). The results showed high degrees of DNA damage and increased frequencies of apoptotic nuclei in blood of fish collected from downstream compared with those sampled from upstream river Nile. Qualitative analysis revealed a shift in the frequency of DNA-damage classes towards higher damage levels correlating with the increasing pollution gradient. The degree of DNA damage measured by use of comet assay and diffusion assay exhibited seasonal variations. Both fish species showed significant increases in DNA damage during the summer. The results of our study indicated that the alkaline comet assay seems to be a useful technique for in situ genotoxic monitoring. At the same time the diffusion assay is sensitive enough to detect low frequencies of apoptotic nuclei. The results reveal species-specific differences in sensitivities, suggesting that Nile tilapia may serve as a more sensitive test species compared with the African catfish. Based on the outcome of the comet and diffusion assays, it can be concluded that the water quality of the river Nile with respect to the presence of genotoxic compounds needs to be improved, especially in its estuaries. As far as we know this is the first time that the comet and diffusion assays are used for genotoxic monitoring of the river Nile.</description><subject>African catfish</subject><subject>Animals</subject><subject>Apoptosis</subject><subject>Apoptosis - drug effects</subject><subject>Brackish</subject><subject>Catfishes - genetics</subject><subject>Cichlids - genetics</subject><subject>Clarias gariepinus</subject><subject>Comet Assay</subject><subject>Cytotoxicity</subject><subject>Diffusion assay</subject><subject>DNA Breaks - drug effects</subject><subject>DNA damage</subject><subject>Egypt</subject><subject>Environmental Monitoring - methods</subject><subject>Fish</subject><subject>Freshwater</subject><subject>Genotoxicity</subject><subject>Mutagenicity Tests - methods</subject><subject>Nile tilapia</subject><subject>Oreochromis niloticus</subject><subject>Oreochromis niloticus niloticus</subject><subject>River Nile</subject><subject>Rivers</subject><subject>Seasons</subject><subject>Species Specificity</subject><subject>Toxicology</subject><subject>Water Pollutants, Chemical - toxicity</subject><subject>Water quality</subject><issn>1383-5718</issn><issn>0027-5107</issn><issn>1879-3592</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2012</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkdtu1DAQhiMEoqXwCpUlblqJBB_ixOGKsuWw0qq96b3ltSe7XrJ2sJ0VPCWvhMN2EeIGydLMyN_8M_ZfFJcEVwST5u2u2ocNuOS_VxQTWuF8CHtSnBPRdiXjHX2acyZYyVsizooXMe4wpphh8bw4o5RTzrg4L34uHYo2TQgOaphUst4h36O0BZTlfda3Go0-5VFWDaerYA8Q0J0d4B1aLit0Cwn0qff27gbFFJQz5TqA-qo2gHKB1OjH5KONyDp0H8DrbfD7XDo7-GT19Hd2tbLOKZjiG0RaLq5_KywGFayKaJMDjNbN3Icp6C0MQ-YEpdcvi2e9GiK8eowXxcOnjw-LL-Xq_vNycbMqdU27VK6xIV1LOGPKtHVTKyaAU9OrFpsWVE-w6XljTL0WqsGqNpwRSqFvMO-aWrOL4uooOwb_bYKYZH6IzmsoB36KkmAqMG3rjmX09T_ozk_B5eVmirCm7rouU82R0sHHGKCXY7B7FX5kSM6Oy508OS5nxyXOh8zyl4_y03oP5k_byeIMvD8CkL_jYCHIqC04DcaGbJo03v5vxi9eiMEy</recordid><startdate>20120830</startdate><enddate>20120830</enddate><creator>Osman, Alaa G.M.</creator><creator>Abuel-Fadl, Khaled Y.</creator><creator>Kloas, Werner</creator><general>Elsevier B.V</general><general>Elsevier BV</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7ST</scope><scope>7TM</scope><scope>7U7</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>P64</scope><scope>RC3</scope><scope>SOI</scope><scope>7QH</scope><scope>7TV</scope><scope>7U6</scope><scope>7UA</scope><scope>F1W</scope><scope>H97</scope><scope>L.G</scope></search><sort><creationdate>20120830</creationdate><title>In situ evaluation of the genotoxic potential of the river Nile: II. Detection of DNA strand-breakage and apoptosis in Oreochromis niloticus niloticus (Linnaeus, 1758) and Clarias gariepinus (Burchell, 1822)</title><author>Osman, Alaa G.M. ; Abuel-Fadl, Khaled Y. ; Kloas, Werner</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c429t-b0d1971533ad7464a38e52dfa70d7eaf10df56dd4b8a60a4d53122ef605964c3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2012</creationdate><topic>African catfish</topic><topic>Animals</topic><topic>Apoptosis</topic><topic>Apoptosis - drug effects</topic><topic>Brackish</topic><topic>Catfishes - genetics</topic><topic>Cichlids - genetics</topic><topic>Clarias gariepinus</topic><topic>Comet Assay</topic><topic>Cytotoxicity</topic><topic>Diffusion assay</topic><topic>DNA Breaks - drug effects</topic><topic>DNA damage</topic><topic>Egypt</topic><topic>Environmental Monitoring - methods</topic><topic>Fish</topic><topic>Freshwater</topic><topic>Genotoxicity</topic><topic>Mutagenicity Tests - methods</topic><topic>Nile tilapia</topic><topic>Oreochromis niloticus</topic><topic>Oreochromis niloticus niloticus</topic><topic>River Nile</topic><topic>Rivers</topic><topic>Seasons</topic><topic>Species Specificity</topic><topic>Toxicology</topic><topic>Water Pollutants, Chemical - toxicity</topic><topic>Water quality</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Osman, Alaa G.M.</creatorcontrib><creatorcontrib>Abuel-Fadl, Khaled Y.</creatorcontrib><creatorcontrib>Kloas, Werner</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Environment Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Toxicology Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>Environment Abstracts</collection><collection>Aqualine</collection><collection>Pollution Abstracts</collection><collection>Sustainability Science Abstracts</collection><collection>Water Resources Abstracts</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 3: Aquatic Pollution & Environmental Quality</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><jtitle>Mutation research</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Osman, Alaa G.M.</au><au>Abuel-Fadl, Khaled Y.</au><au>Kloas, Werner</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>In situ evaluation of the genotoxic potential of the river Nile: II. Detection of DNA strand-breakage and apoptosis in Oreochromis niloticus niloticus (Linnaeus, 1758) and Clarias gariepinus (Burchell, 1822)</atitle><jtitle>Mutation research</jtitle><addtitle>Mutat Res</addtitle><date>2012-08-30</date><risdate>2012</risdate><volume>747</volume><issue>1</issue><spage>14</spage><epage>21</epage><pages>14-21</pages><issn>1383-5718</issn><issn>0027-5107</issn><eissn>1879-3592</eissn><abstract>This work is part of a wider eco-toxicological study proposed to evaluate the biological impact of contaminants along the whole course of the river Nile, Egypt. Here we present data on the presence of DNA strand-breaks and apoptotic cells assessed by use of comet and diffusion assays in erythrocytes of Nile tilapia (Oreochromis niloticus niloticus) and African catfish (Clarias gariepinus). The results showed high degrees of DNA damage and increased frequencies of apoptotic nuclei in blood of fish collected from downstream compared with those sampled from upstream river Nile. Qualitative analysis revealed a shift in the frequency of DNA-damage classes towards higher damage levels correlating with the increasing pollution gradient. The degree of DNA damage measured by use of comet assay and diffusion assay exhibited seasonal variations. Both fish species showed significant increases in DNA damage during the summer. The results of our study indicated that the alkaline comet assay seems to be a useful technique for in situ genotoxic monitoring. At the same time the diffusion assay is sensitive enough to detect low frequencies of apoptotic nuclei. The results reveal species-specific differences in sensitivities, suggesting that Nile tilapia may serve as a more sensitive test species compared with the African catfish. Based on the outcome of the comet and diffusion assays, it can be concluded that the water quality of the river Nile with respect to the presence of genotoxic compounds needs to be improved, especially in its estuaries. As far as we know this is the first time that the comet and diffusion assays are used for genotoxic monitoring of the river Nile.</abstract><cop>Netherlands</cop><pub>Elsevier B.V</pub><pmid>22525358</pmid><doi>10.1016/j.mrgentox.2012.02.013</doi><tpages>8</tpages></addata></record> |
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subjects | African catfish Animals Apoptosis Apoptosis - drug effects Brackish Catfishes - genetics Cichlids - genetics Clarias gariepinus Comet Assay Cytotoxicity Diffusion assay DNA Breaks - drug effects DNA damage Egypt Environmental Monitoring - methods Fish Freshwater Genotoxicity Mutagenicity Tests - methods Nile tilapia Oreochromis niloticus Oreochromis niloticus niloticus River Nile Rivers Seasons Species Specificity Toxicology Water Pollutants, Chemical - toxicity Water quality |
title | In situ evaluation of the genotoxic potential of the river Nile: II. Detection of DNA strand-breakage and apoptosis in Oreochromis niloticus niloticus (Linnaeus, 1758) and Clarias gariepinus (Burchell, 1822) |
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