Temperature dependence of accuracy of DNA polymerase I from Geobacillus anatolicus
Klenow-like DNA polymerase I fragment from Geobacillus anatolicus (GF) was cloned and purified. The accuracy of GF was measured in vitro at three different temperatures under single turnover conditions as well as using a forward mutation assay. In pre-steady-state kinetic measurements, when temperat...
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Veröffentlicht in: | Biochimie 2012-09, Vol.94 (9), p.1968-1973 |
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Sprache: | eng |
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Zusammenfassung: | Klenow-like DNA polymerase I fragment from Geobacillus anatolicus (GF) was cloned and purified. The accuracy of GF was measured in vitro at three different temperatures under single turnover conditions as well as using a forward mutation assay. In pre-steady-state kinetic measurements, when temperature was raised from 22 °C to 50 °C, the rate (kpol) for cognate dTTP and non-cognate dATP nucleotide incorporations increased six- and four-fold, respectively, whereas the Kd for both nucleotide incorporations changed only slightly. As a result, the error frequency was remained constant (∼4 × 10−4) over this temperature range. The accuracy of GF was also measured using a forward mutation assay during a single cycle of DNA synthesis of the lacZα complementation gene in M13mp2 DNA. In this assay, which scores various types of replication errors, mutant frequency of GF was 5 × 10−3 at 72 °C which is four-fold higher than that of 37 °C.
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► Klenow-like DNA polymerase I fragment from Geobacillus anatolicus (GF) was studied. ► Accuracy of GF was measured at 22 °C, 37 °C, 50 °C using single turnover kinetics. ► kpol increased and Kd changed slightly for a single nucleotide insertion by GF. ► Error frequency of GF remained essentially constant with temperature increase. |
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ISSN: | 0300-9084 1638-6183 |
DOI: | 10.1016/j.biochi.2012.05.019 |