low prevalence of mycobacteria in freshwater fish from water reservoirs, ponds and farms
A survey of the occurrence of mycobacteria was conducted from 717 freshwater fish (25 species) in two water reservoirs, five ponds and two farms in the Czech Republic. A total of 2182 tissue samples from these fish were examined using the conventional culture method. Thirteen mycobacterial isolates...
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Veröffentlicht in: | Journal of fish diseases 2012-07, Vol.35 (7), p.497-504 |
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creator | Mrlik, V Slany, M Kubecka, J Seda, J Necas, A Babak, V Slana, I Kriz, P Pavlik, I |
description | A survey of the occurrence of mycobacteria was conducted from 717 freshwater fish (25 species) in two water reservoirs, five ponds and two farms in the Czech Republic. A total of 2182 tissue samples from these fish were examined using the conventional culture method. Thirteen mycobacterial isolates were obtained from 12 (1.7%) fish belonging to nine species. Isolates were identified using sequence analysis of the 16S rRNA gene as: Mycobacterium algericum, M. fortuitum, M. gordonae, M. insubricum, M. kumamotonense, M. nonchromogenicum, two isolates of M. peregrinum, M. terrae and M. triplex. Mycobacteria were isolated more frequently from fish skin and gills than from internal organs or muscles. |
doi_str_mv | 10.1111/j.1365-2761.2012.01369.x |
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A total of 2182 tissue samples from these fish were examined using the conventional culture method. Thirteen mycobacterial isolates were obtained from 12 (1.7%) fish belonging to nine species. Isolates were identified using sequence analysis of the 16S rRNA gene as: Mycobacterium algericum, M. fortuitum, M. gordonae, M. insubricum, M. kumamotonense, M. nonchromogenicum, two isolates of M. peregrinum, M. terrae and M. triplex. Mycobacteria were isolated more frequently from fish skin and gills than from internal organs or muscles.</description><identifier>ISSN: 0140-7775</identifier><identifier>EISSN: 1365-2761</identifier><identifier>DOI: 10.1111/j.1365-2761.2012.01369.x</identifier><identifier>PMID: 22537026</identifier><language>eng</language><publisher>Oxford, UK: Blackwell Publishing Ltd</publisher><subject>Animals ; Czech Republic ; disease prevalence ; fish diseases ; Fish Diseases - epidemiology ; Fish Diseases - microbiology ; Fishes ; food safety ; Fresh Water ; freshwater fish ; genes ; gills ; muscles ; mycobacterial diseases ; mycobacteriosis ; Mycobacterium ; Mycobacterium - genetics ; Mycobacterium - isolation & purification ; Mycobacterium Infections - epidemiology ; Mycobacterium Infections - veterinary ; pathogen identification ; Ponds ; potentially pathogenic mycobacteria ; Prevalence ; RNA, Ribosomal, 16S - genetics ; sequence analysis ; surveys ; water reservoirs ; zoonoses</subject><ispartof>Journal of fish diseases, 2012-07, Vol.35 (7), p.497-504</ispartof><rights>2012 Blackwell Publishing Ltd</rights><rights>2012 Blackwell Publishing Ltd.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c5259-be9c732e90242138f8b1000ab61c407fb8bd732f8ad9a384893d7d1f61a640563</citedby><cites>FETCH-LOGICAL-c5259-be9c732e90242138f8b1000ab61c407fb8bd732f8ad9a384893d7d1f61a640563</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1111%2Fj.1365-2761.2012.01369.x$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1111%2Fj.1365-2761.2012.01369.x$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>314,780,784,1416,27923,27924,45573,45574</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/22537026$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Mrlik, V</creatorcontrib><creatorcontrib>Slany, M</creatorcontrib><creatorcontrib>Kubecka, J</creatorcontrib><creatorcontrib>Seda, J</creatorcontrib><creatorcontrib>Necas, A</creatorcontrib><creatorcontrib>Babak, V</creatorcontrib><creatorcontrib>Slana, I</creatorcontrib><creatorcontrib>Kriz, P</creatorcontrib><creatorcontrib>Pavlik, I</creatorcontrib><title>low prevalence of mycobacteria in freshwater fish from water reservoirs, ponds and farms</title><title>Journal of fish diseases</title><addtitle>J Fish Dis</addtitle><description>A survey of the occurrence of mycobacteria was conducted from 717 freshwater fish (25 species) in two water reservoirs, five ponds and two farms in the Czech Republic. A total of 2182 tissue samples from these fish were examined using the conventional culture method. Thirteen mycobacterial isolates were obtained from 12 (1.7%) fish belonging to nine species. Isolates were identified using sequence analysis of the 16S rRNA gene as: Mycobacterium algericum, M. fortuitum, M. gordonae, M. insubricum, M. kumamotonense, M. nonchromogenicum, two isolates of M. peregrinum, M. terrae and M. triplex. Mycobacteria were isolated more frequently from fish skin and gills than from internal organs or muscles.</description><subject>Animals</subject><subject>Czech Republic</subject><subject>disease prevalence</subject><subject>fish diseases</subject><subject>Fish Diseases - epidemiology</subject><subject>Fish Diseases - microbiology</subject><subject>Fishes</subject><subject>food safety</subject><subject>Fresh Water</subject><subject>freshwater fish</subject><subject>genes</subject><subject>gills</subject><subject>muscles</subject><subject>mycobacterial diseases</subject><subject>mycobacteriosis</subject><subject>Mycobacterium</subject><subject>Mycobacterium - genetics</subject><subject>Mycobacterium - isolation & purification</subject><subject>Mycobacterium Infections - epidemiology</subject><subject>Mycobacterium Infections - veterinary</subject><subject>pathogen identification</subject><subject>Ponds</subject><subject>potentially pathogenic mycobacteria</subject><subject>Prevalence</subject><subject>RNA, Ribosomal, 16S - genetics</subject><subject>sequence analysis</subject><subject>surveys</subject><subject>water reservoirs</subject><subject>zoonoses</subject><issn>0140-7775</issn><issn>1365-2761</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2012</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqNkMFv0zAYxS0EYt3GvwCWuHBYwmc7tuMDh6mwwVYxJJhAXCwnsVlKEhe7Xdv_HoeMHjjhi_30_d6z_RDCBHKS1utlTpjgGZWC5BQIzSFple8eodlh8BjNgBSQSSn5ETqOcQlAJCfiKTqilDMJVMzQt85v8SrYe9PZobbYO9zva1-Zem1Da3A7YBdsvNuapLFr413SvseTThMb7n0b4hle-aGJ2AwNdib08RQ9caaL9tnDfoJuL959mb_PFjeXH-bni6zmlKussqqWjFoFtKCEla6sCACYSpC6AOmqsmrS3JWmUYaVRalYIxviBDGiAC7YCXo15a6C_7Wxca37Nta268xg_SZqAhSAA1UyoS__QZd-E4b0ukQRxVMngiaqnKg6-BiDdXoV2t6EfYL02L5e6rFkPZasx_b1n_b1LlmfP1ywqXrbHIx_607AmwnYtp3d_3ewvrp4O56SP5v8bVzb3cFvwk8tJJNcf_14qcmnBcyZ-q6vE_9i4p3x2vwIbdS3n1MyS98VwEjJfgNAW6ne</recordid><startdate>201207</startdate><enddate>201207</enddate><creator>Mrlik, V</creator><creator>Slany, M</creator><creator>Kubecka, J</creator><creator>Seda, J</creator><creator>Necas, A</creator><creator>Babak, V</creator><creator>Slana, I</creator><creator>Kriz, P</creator><creator>Pavlik, I</creator><general>Blackwell Publishing Ltd</general><scope>FBQ</scope><scope>BSCLL</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7TN</scope><scope>7U9</scope><scope>8FD</scope><scope>C1K</scope><scope>F1W</scope><scope>FR3</scope><scope>H94</scope><scope>H95</scope><scope>H98</scope><scope>H99</scope><scope>L.F</scope><scope>L.G</scope><scope>M7N</scope><scope>P64</scope><scope>7X8</scope></search><sort><creationdate>201207</creationdate><title>low prevalence of mycobacteria in freshwater fish from water reservoirs, ponds and farms</title><author>Mrlik, V ; 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A total of 2182 tissue samples from these fish were examined using the conventional culture method. Thirteen mycobacterial isolates were obtained from 12 (1.7%) fish belonging to nine species. Isolates were identified using sequence analysis of the 16S rRNA gene as: Mycobacterium algericum, M. fortuitum, M. gordonae, M. insubricum, M. kumamotonense, M. nonchromogenicum, two isolates of M. peregrinum, M. terrae and M. triplex. Mycobacteria were isolated more frequently from fish skin and gills than from internal organs or muscles.</abstract><cop>Oxford, UK</cop><pub>Blackwell Publishing Ltd</pub><pmid>22537026</pmid><doi>10.1111/j.1365-2761.2012.01369.x</doi><tpages>8</tpages></addata></record> |
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subjects | Animals Czech Republic disease prevalence fish diseases Fish Diseases - epidemiology Fish Diseases - microbiology Fishes food safety Fresh Water freshwater fish genes gills muscles mycobacterial diseases mycobacteriosis Mycobacterium Mycobacterium - genetics Mycobacterium - isolation & purification Mycobacterium Infections - epidemiology Mycobacterium Infections - veterinary pathogen identification Ponds potentially pathogenic mycobacteria Prevalence RNA, Ribosomal, 16S - genetics sequence analysis surveys water reservoirs zoonoses |
title | low prevalence of mycobacteria in freshwater fish from water reservoirs, ponds and farms |
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