P-glycoproteins of Haemonchus contortus: development of real-time PCR assays for gene expression studies
P-glycoproteins (P-gps) are proteins that function as efflux pumps, removing lipophilic xenobiotic compounds from cells. There is evidence that P-gps play a role in the resistance of parasitic nematodes to anthelmintic drugs such as benzimidazoles and macrocyclic lactones. As anthelmintic resistance...
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description | P-glycoproteins (P-gps) are proteins that function as efflux pumps, removing lipophilic xenobiotic compounds from cells. There is evidence that P-gps play a role in the resistance of parasitic nematodes to anthelmintic drugs such as benzimidazoles and macrocyclic lactones. As anthelmintic resistance becomes more common, it is important to identify candidate resistance genes with the aim of understanding the molecular basis of resistance, and of developing assays to detect these resistance-associated changes. We identified several sequences from the genome of the parasite Haemonchus contortus with convincing homology to the known P-gp coding genes of the model nematode Caenorhabditis elegans. Nine of these sequences were successfully amplified by polymerase chain reaction (PCR) and shown to be most similar to the C. elegans sequences for pgp-1, pgp-2, pgp-3, pgp-4, pgp-9, pgp-10, pgp-11, pgp-12 and pgp-14. These partial P-gp sequences from H. contortus were used to design and optimize a quantitative real-time PCR assay to investigate potential changes in the expression levels of P-gp transcripts associated with drug resistance. No significant changes in P-gp mRNA expression levels were found in a rapidly selected ivermectin-resistant parasite isolate compared to its drug-sensitive parent, but the assay has the potential to be used on other isolates in the future to further investigate resistance-associated changes in P-gp gene expression. |
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There is evidence that P-gps play a role in the resistance of parasitic nematodes to anthelmintic drugs such as benzimidazoles and macrocyclic lactones. As anthelmintic resistance becomes more common, it is important to identify candidate resistance genes with the aim of understanding the molecular basis of resistance, and of developing assays to detect these resistance-associated changes. We identified several sequences from the genome of the parasite Haemonchus contortus with convincing homology to the known P-gp coding genes of the model nematode Caenorhabditis elegans. Nine of these sequences were successfully amplified by polymerase chain reaction (PCR) and shown to be most similar to the C. elegans sequences for pgp-1, pgp-2, pgp-3, pgp-4, pgp-9, pgp-10, pgp-11, pgp-12 and pgp-14. These partial P-gp sequences from H. contortus were used to design and optimize a quantitative real-time PCR assay to investigate potential changes in the expression levels of P-gp transcripts associated with drug resistance. No significant changes in P-gp mRNA expression levels were found in a rapidly selected ivermectin-resistant parasite isolate compared to its drug-sensitive parent, but the assay has the potential to be used on other isolates in the future to further investigate resistance-associated changes in P-gp gene expression.</description><identifier>ISSN: 0022-149X</identifier><identifier>EISSN: 1475-2697</identifier><identifier>DOI: 10.1017/S0022149X11000216</identifier><identifier>PMID: 21729384</identifier><identifier>CODEN: JOHLAT</identifier><language>eng</language><publisher>Cambridge, UK: Cambridge University Press</publisher><subject>Animals ; Anthelmintics - pharmacology ; ATP Binding Cassette Transporter, Sub-Family B - biosynthesis ; ATP Binding Cassette Transporter, Sub-Family B - genetics ; Biological and medical sciences ; Caenorhabditis elegans - genetics ; DNA Primers - genetics ; DNA, Helminth - chemistry ; DNA, Helminth - genetics ; Drug Resistance ; Fundamental and applied biological sciences. Psychology ; Gene Expression Profiling - methods ; Haemonchus - genetics ; Helminth Proteins - biosynthesis ; Helminth Proteins - genetics ; Host parasite relation; pathogenicity ; Invertebrates ; Molecular Sequence Data ; Nemathelminthia. Plathelmintha ; Phylogeny ; Real-Time Polymerase Chain Reaction - methods ; Sequence Analysis, DNA ; Sequence Homology, Amino Acid</subject><ispartof>Journal of helminthology, 2012-06, Vol.86 (2), p.202-208</ispartof><rights>Copyright © Cambridge University Press 2011</rights><rights>2014 INIST-CNRS</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c403t-dc248d6bd0a112c60b034e246cbf99b42c46bf84e34367b6551e4f6e76ec64cf3</citedby><cites>FETCH-LOGICAL-c403t-dc248d6bd0a112c60b034e246cbf99b42c46bf84e34367b6551e4f6e76ec64cf3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.cambridge.org/core/product/identifier/S0022149X11000216/type/journal_article$$EHTML$$P50$$Gcambridge$$H</linktohtml><link.rule.ids>164,314,776,780,27901,27902,55603</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=25849715$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/21729384$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Williamson, S.M.</creatorcontrib><creatorcontrib>Wolstenholme, A.J.</creatorcontrib><title>P-glycoproteins of Haemonchus contortus: development of real-time PCR assays for gene expression studies</title><title>Journal of helminthology</title><addtitle>J Helminthol</addtitle><description>P-glycoproteins (P-gps) are proteins that function as efflux pumps, removing lipophilic xenobiotic compounds from cells. There is evidence that P-gps play a role in the resistance of parasitic nematodes to anthelmintic drugs such as benzimidazoles and macrocyclic lactones. As anthelmintic resistance becomes more common, it is important to identify candidate resistance genes with the aim of understanding the molecular basis of resistance, and of developing assays to detect these resistance-associated changes. We identified several sequences from the genome of the parasite Haemonchus contortus with convincing homology to the known P-gp coding genes of the model nematode Caenorhabditis elegans. Nine of these sequences were successfully amplified by polymerase chain reaction (PCR) and shown to be most similar to the C. elegans sequences for pgp-1, pgp-2, pgp-3, pgp-4, pgp-9, pgp-10, pgp-11, pgp-12 and pgp-14. These partial P-gp sequences from H. contortus were used to design and optimize a quantitative real-time PCR assay to investigate potential changes in the expression levels of P-gp transcripts associated with drug resistance. No significant changes in P-gp mRNA expression levels were found in a rapidly selected ivermectin-resistant parasite isolate compared to its drug-sensitive parent, but the assay has the potential to be used on other isolates in the future to further investigate resistance-associated changes in P-gp gene expression.</description><subject>Animals</subject><subject>Anthelmintics - pharmacology</subject><subject>ATP Binding Cassette Transporter, Sub-Family B - biosynthesis</subject><subject>ATP Binding Cassette Transporter, Sub-Family B - genetics</subject><subject>Biological and medical sciences</subject><subject>Caenorhabditis elegans - genetics</subject><subject>DNA Primers - genetics</subject><subject>DNA, Helminth - chemistry</subject><subject>DNA, Helminth - genetics</subject><subject>Drug Resistance</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Gene Expression Profiling - methods</subject><subject>Haemonchus - genetics</subject><subject>Helminth Proteins - biosynthesis</subject><subject>Helminth Proteins - genetics</subject><subject>Host parasite relation; pathogenicity</subject><subject>Invertebrates</subject><subject>Molecular Sequence Data</subject><subject>Nemathelminthia. Plathelmintha</subject><subject>Phylogeny</subject><subject>Real-Time Polymerase Chain Reaction - methods</subject><subject>Sequence Analysis, DNA</subject><subject>Sequence Homology, Amino Acid</subject><issn>0022-149X</issn><issn>1475-2697</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2012</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>BENPR</sourceid><recordid>eNp10d1rFDEQAPAgSnvW_gG-SECEvqxmstlkt29ytFYoWLQF345sdnLdspucmd3i_ffm7PmBxacE5jcfmTD2EsRbEGDefRFCSlDNVwCRr6CfsAUoUxVSN-YpW-zCxS5-yJ4T3WVTgqwO2KEEI5uyVgt2e1Wsh62LmxQn7APx6PmFxTEGdzsTdzFMMU0znfIO73GImxHDtEMJ7VBM_Yj8avmZWyK7Je5j4msMyPH7JiFRHwOnae56pBfsmbcD4fH-PGI352fXy4vi8tOHj8v3l4VTopyKzklVd7rthAWQTotWlAql0q71TdMq6ZRufa2wVKU2ra4qQOU1Go1OK-fLI3byUDe_6NuMNK3GnhwOgw0YZ1rlxQE0Sokm09f_0Ls4p5Cn-6m0lAbqrOBBuRSJEvrVJvWjTduMds6sHn1Dznm1rzy3I3a_M37tPYM3e2DJ2cEnG1xPf1xVq8ZAlV25b27HNvXdGv-e8X_tfwDY7571</recordid><startdate>20120601</startdate><enddate>20120601</enddate><creator>Williamson, S.M.</creator><creator>Wolstenholme, A.J.</creator><general>Cambridge University Press</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QG</scope><scope>7SN</scope><scope>7X2</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8C1</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>ATCPS</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>F1W</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>H95</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>L.G</scope><scope>M0K</scope><scope>M0S</scope><scope>M1P</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>7X8</scope></search><sort><creationdate>20120601</creationdate><title>P-glycoproteins of Haemonchus contortus: development of real-time PCR assays for gene expression studies</title><author>Williamson, S.M. ; Wolstenholme, A.J.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c403t-dc248d6bd0a112c60b034e246cbf99b42c46bf84e34367b6551e4f6e76ec64cf3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2012</creationdate><topic>Animals</topic><topic>Anthelmintics - pharmacology</topic><topic>ATP Binding Cassette Transporter, Sub-Family B - biosynthesis</topic><topic>ATP Binding Cassette Transporter, Sub-Family B - genetics</topic><topic>Biological and medical sciences</topic><topic>Caenorhabditis elegans - genetics</topic><topic>DNA Primers - genetics</topic><topic>DNA, Helminth - chemistry</topic><topic>DNA, Helminth - genetics</topic><topic>Drug Resistance</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Gene Expression Profiling - methods</topic><topic>Haemonchus - genetics</topic><topic>Helminth Proteins - biosynthesis</topic><topic>Helminth Proteins - genetics</topic><topic>Host parasite relation; pathogenicity</topic><topic>Invertebrates</topic><topic>Molecular Sequence Data</topic><topic>Nemathelminthia. Plathelmintha</topic><topic>Phylogeny</topic><topic>Real-Time Polymerase Chain Reaction - methods</topic><topic>Sequence Analysis, DNA</topic><topic>Sequence Homology, Amino Acid</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Williamson, S.M.</creatorcontrib><creatorcontrib>Wolstenholme, A.J.</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Animal Behavior Abstracts</collection><collection>Ecology Abstracts</collection><collection>Agricultural Science Collection</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Public Health Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>Agricultural & Environmental Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><collection>Agricultural Science Database</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of helminthology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Williamson, S.M.</au><au>Wolstenholme, A.J.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>P-glycoproteins of Haemonchus contortus: development of real-time PCR assays for gene expression studies</atitle><jtitle>Journal of helminthology</jtitle><addtitle>J Helminthol</addtitle><date>2012-06-01</date><risdate>2012</risdate><volume>86</volume><issue>2</issue><spage>202</spage><epage>208</epage><pages>202-208</pages><issn>0022-149X</issn><eissn>1475-2697</eissn><coden>JOHLAT</coden><abstract>P-glycoproteins (P-gps) are proteins that function as efflux pumps, removing lipophilic xenobiotic compounds from cells. There is evidence that P-gps play a role in the resistance of parasitic nematodes to anthelmintic drugs such as benzimidazoles and macrocyclic lactones. As anthelmintic resistance becomes more common, it is important to identify candidate resistance genes with the aim of understanding the molecular basis of resistance, and of developing assays to detect these resistance-associated changes. We identified several sequences from the genome of the parasite Haemonchus contortus with convincing homology to the known P-gp coding genes of the model nematode Caenorhabditis elegans. Nine of these sequences were successfully amplified by polymerase chain reaction (PCR) and shown to be most similar to the C. elegans sequences for pgp-1, pgp-2, pgp-3, pgp-4, pgp-9, pgp-10, pgp-11, pgp-12 and pgp-14. These partial P-gp sequences from H. contortus were used to design and optimize a quantitative real-time PCR assay to investigate potential changes in the expression levels of P-gp transcripts associated with drug resistance. No significant changes in P-gp mRNA expression levels were found in a rapidly selected ivermectin-resistant parasite isolate compared to its drug-sensitive parent, but the assay has the potential to be used on other isolates in the future to further investigate resistance-associated changes in P-gp gene expression.</abstract><cop>Cambridge, UK</cop><pub>Cambridge University Press</pub><pmid>21729384</pmid><doi>10.1017/S0022149X11000216</doi><tpages>7</tpages></addata></record> |
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subjects | Animals Anthelmintics - pharmacology ATP Binding Cassette Transporter, Sub-Family B - biosynthesis ATP Binding Cassette Transporter, Sub-Family B - genetics Biological and medical sciences Caenorhabditis elegans - genetics DNA Primers - genetics DNA, Helminth - chemistry DNA, Helminth - genetics Drug Resistance Fundamental and applied biological sciences. Psychology Gene Expression Profiling - methods Haemonchus - genetics Helminth Proteins - biosynthesis Helminth Proteins - genetics Host parasite relation pathogenicity Invertebrates Molecular Sequence Data Nemathelminthia. Plathelmintha Phylogeny Real-Time Polymerase Chain Reaction - methods Sequence Analysis, DNA Sequence Homology, Amino Acid |
title | P-glycoproteins of Haemonchus contortus: development of real-time PCR assays for gene expression studies |
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