Diversity of the ectomycorrhiza community at a uranium mining heap
Ectomycorrhiza (EM) community structure was analyzed at one bare heap site (BHS), one heap site with organic cover (HS-OH) and one reference site (RS) in the former uranium mining area near Ronneburg (Thuringia, Germany). Twenty-three EM morphotypes were distinguished, and 14 of them were additional...
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| Veröffentlicht in: | Biology and fertility of soils 2005-08, Vol.41 (6), p.439-446 |
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| creator | Staudenrausch, S Kaldorf, M Renker, C Luis, P Buscot, F |
| description | Ectomycorrhiza (EM) community structure was analyzed at one bare heap site (BHS), one heap site with organic cover (HS-OH) and one reference site (RS) in the former uranium mining area near Ronneburg (Thuringia, Germany). Twenty-three EM morphotypes were distinguished, and 14 of them were additionally characterized by polymerase chain reaction (PCR), restriction fragment length polymorphism (RFLP) and internal transcribed spacer (ITS) sequence analysis. Colonization of birch by the different morphotypes was quantified, and the EM diversity at the different sites was investigated. Compared to RS, total EM colonization was reduced by 6% (P=0.851) at HS-OH and by 58% (P |
| doi_str_mv | 10.1007/s00374-005-0849-4 |
| format | Article |
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Twenty-three EM morphotypes were distinguished, and 14 of them were additionally characterized by polymerase chain reaction (PCR), restriction fragment length polymorphism (RFLP) and internal transcribed spacer (ITS) sequence analysis. Colonization of birch by the different morphotypes was quantified, and the EM diversity at the different sites was investigated. Compared to RS, total EM colonization was reduced by 6% (P=0.851) at HS-OH and by 58% (P<0.001) at BHS. Likewise, EM diversity was reduced by 16% (P=0.229) at HS-OH and 52% (P<0.001) at BHS. The Sørensen similarity between EM samples from RS was nearly independent from the sampling date, whereas at HS-OH and especially BHS, the Sørensen similarity decreased with increasing time between the samplings. All EM fungal species dominating at the two heap sites were also present at RS. Thus, fungi with high tolerance against uranium and other stress factors at the heap sites (e.g. heavy metals, nutrient limitation, drought) were selected among all EM fungi of the area. Highly adapted fungi with a distribution restricted to the contaminated soils were not detected.</description><identifier>ISSN: 0178-2762</identifier><identifier>EISSN: 1432-0789</identifier><identifier>DOI: 10.1007/s00374-005-0849-4</identifier><identifier>CODEN: BFSOEE</identifier><language>eng</language><publisher>Berlin: Springer</publisher><subject>Agronomy. Soil science and plant productions ; Bacteria ; Betula pendula ; biodiversity ; Biological and medical sciences ; Colonization ; colonizing ability ; Community structure ; Drought ; Economic plant physiology ; ectomycorrhizae ; Fundamental and applied biological sciences. Psychology ; Heavy metals ; internal transcribed spacers ; Microbiology ; mined soils ; mining ; plant communities ; plant morphology ; polluted soils ; polymerase chain reaction ; restriction fragment length polymorphism ; sequence analysis ; Soil contamination ; Soil science ; Symbiosis (nodules, symbiotic nitrogen fixation, mycorrhiza...) ; Uranium</subject><ispartof>Biology and fertility of soils, 2005-08, Vol.41 (6), p.439-446</ispartof><rights>2005 INIST-CNRS</rights><rights>Springer-Verlag 2005</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c392t-a1bfb55548fbc34838d5df4e882a4a1f62590e727e026c8482ce3f2e2bf041a43</citedby><cites>FETCH-LOGICAL-c392t-a1bfb55548fbc34838d5df4e882a4a1f62590e727e026c8482ce3f2e2bf041a43</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,27901,27902</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=17029321$$DView record in Pascal Francis$$Hfree_for_read</backlink></links><search><creatorcontrib>Staudenrausch, S</creatorcontrib><creatorcontrib>Kaldorf, M</creatorcontrib><creatorcontrib>Renker, C</creatorcontrib><creatorcontrib>Luis, P</creatorcontrib><creatorcontrib>Buscot, F</creatorcontrib><title>Diversity of the ectomycorrhiza community at a uranium mining heap</title><title>Biology and fertility of soils</title><description>Ectomycorrhiza (EM) community structure was analyzed at one bare heap site (BHS), one heap site with organic cover (HS-OH) and one reference site (RS) in the former uranium mining area near Ronneburg (Thuringia, Germany). Twenty-three EM morphotypes were distinguished, and 14 of them were additionally characterized by polymerase chain reaction (PCR), restriction fragment length polymorphism (RFLP) and internal transcribed spacer (ITS) sequence analysis. Colonization of birch by the different morphotypes was quantified, and the EM diversity at the different sites was investigated. Compared to RS, total EM colonization was reduced by 6% (P=0.851) at HS-OH and by 58% (P<0.001) at BHS. Likewise, EM diversity was reduced by 16% (P=0.229) at HS-OH and 52% (P<0.001) at BHS. The Sørensen similarity between EM samples from RS was nearly independent from the sampling date, whereas at HS-OH and especially BHS, the Sørensen similarity decreased with increasing time between the samplings. All EM fungal species dominating at the two heap sites were also present at RS. Thus, fungi with high tolerance against uranium and other stress factors at the heap sites (e.g. heavy metals, nutrient limitation, drought) were selected among all EM fungi of the area. Highly adapted fungi with a distribution restricted to the contaminated soils were not detected.</description><subject>Agronomy. Soil science and plant productions</subject><subject>Bacteria</subject><subject>Betula pendula</subject><subject>biodiversity</subject><subject>Biological and medical sciences</subject><subject>Colonization</subject><subject>colonizing ability</subject><subject>Community structure</subject><subject>Drought</subject><subject>Economic plant physiology</subject><subject>ectomycorrhizae</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Heavy metals</subject><subject>internal transcribed spacers</subject><subject>Microbiology</subject><subject>mined soils</subject><subject>mining</subject><subject>plant communities</subject><subject>plant morphology</subject><subject>polluted soils</subject><subject>polymerase chain reaction</subject><subject>restriction fragment length polymorphism</subject><subject>sequence analysis</subject><subject>Soil contamination</subject><subject>Soil science</subject><subject>Symbiosis (nodules, symbiotic nitrogen fixation, mycorrhiza...)</subject><subject>Uranium</subject><issn>0178-2762</issn><issn>1432-0789</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2005</creationdate><recordtype>article</recordtype><sourceid>BENPR</sourceid><recordid>eNpFkE1LAzEQhoMoWKs_wJNB8BidfG2yR78VCh6055BNk3ZLd1OTXaH-erdswdMc5nnfYR6ELincUgB1lwG4EgRAEtCiJOIITajgjIDS5TGaAFWaMFWwU3SW8xqASk3LCXp4qn98ynW3wzHgbuWxd11sdi6mtKp_LXaxafp2v7cdtrhPtq37Bjd1W7dLvPJ2e45Ogt1kf3GYUzR_ef56fCOzj9f3x_sZcbxkHbG0CpWUUuhQOS401wu5CMJrzaywNBRMluAVUx5Y4bTQzHkemGdVAEGt4FN0PfZuU_zufe7MOvapHU6agnKulVJsgOgIuRRzTj6Ybaobm3aGgtmbMqMpM5gye1NmX3xzKLbZ2U0YXnR1_g8qYCVndOCuRi7YaOwyDcz8kwHlQKHgRSH5H-XhcVM</recordid><startdate>20050801</startdate><enddate>20050801</enddate><creator>Staudenrausch, S</creator><creator>Kaldorf, M</creator><creator>Renker, C</creator><creator>Luis, P</creator><creator>Buscot, F</creator><general>Springer</general><general>Springer Nature B.V</general><scope>FBQ</scope><scope>IQODW</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7SN</scope><scope>7T7</scope><scope>7UA</scope><scope>7X2</scope><scope>7XB</scope><scope>88I</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>F1W</scope><scope>FR3</scope><scope>GNUQQ</scope><scope>H95</scope><scope>HCIFZ</scope><scope>L.G</scope><scope>LK8</scope><scope>M0K</scope><scope>M2P</scope><scope>M7P</scope><scope>P64</scope><scope>PATMY</scope><scope>PHGZM</scope><scope>PHGZT</scope><scope>PKEHL</scope><scope>PQEST</scope><scope>PQGLB</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PYCSY</scope><scope>Q9U</scope></search><sort><creationdate>20050801</creationdate><title>Diversity of the ectomycorrhiza community at a uranium mining heap</title><author>Staudenrausch, S ; Kaldorf, M ; Renker, C ; Luis, P ; Buscot, F</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c392t-a1bfb55548fbc34838d5df4e882a4a1f62590e727e026c8482ce3f2e2bf041a43</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2005</creationdate><topic>Agronomy. 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Psychology</topic><topic>Heavy metals</topic><topic>internal transcribed spacers</topic><topic>Microbiology</topic><topic>mined soils</topic><topic>mining</topic><topic>plant communities</topic><topic>plant morphology</topic><topic>polluted soils</topic><topic>polymerase chain reaction</topic><topic>restriction fragment length polymorphism</topic><topic>sequence analysis</topic><topic>Soil contamination</topic><topic>Soil science</topic><topic>Symbiosis (nodules, symbiotic nitrogen fixation, mycorrhiza...)</topic><topic>Uranium</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Staudenrausch, S</creatorcontrib><creatorcontrib>Kaldorf, M</creatorcontrib><creatorcontrib>Renker, C</creatorcontrib><creatorcontrib>Luis, P</creatorcontrib><creatorcontrib>Buscot, F</creatorcontrib><collection>AGRIS</collection><collection>Pascal-Francis</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Ecology Abstracts</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Water Resources Abstracts</collection><collection>Agricultural Science Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Science Database (Alumni Edition)</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central UK/Ireland</collection><collection>Agricultural & Environmental Science Collection</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection (ProQuest)</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Engineering Research Database</collection><collection>ProQuest Central Student</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources</collection><collection>SciTech Premium Collection</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><collection>ProQuest Biological Science Collection</collection><collection>Agricultural Science Database</collection><collection>Science Database</collection><collection>ProQuest Biological Science Journals</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Environmental Science Database</collection><collection>ProQuest Central (New)</collection><collection>ProQuest One Academic (New)</collection><collection>ProQuest One Academic Middle East (New)</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Applied & Life Sciences</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>Environmental Science Collection</collection><collection>ProQuest Central Basic</collection><jtitle>Biology and fertility of soils</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Staudenrausch, S</au><au>Kaldorf, M</au><au>Renker, C</au><au>Luis, P</au><au>Buscot, F</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Diversity of the ectomycorrhiza community at a uranium mining heap</atitle><jtitle>Biology and fertility of soils</jtitle><date>2005-08-01</date><risdate>2005</risdate><volume>41</volume><issue>6</issue><spage>439</spage><epage>446</epage><pages>439-446</pages><issn>0178-2762</issn><eissn>1432-0789</eissn><coden>BFSOEE</coden><abstract>Ectomycorrhiza (EM) community structure was analyzed at one bare heap site (BHS), one heap site with organic cover (HS-OH) and one reference site (RS) in the former uranium mining area near Ronneburg (Thuringia, Germany). Twenty-three EM morphotypes were distinguished, and 14 of them were additionally characterized by polymerase chain reaction (PCR), restriction fragment length polymorphism (RFLP) and internal transcribed spacer (ITS) sequence analysis. Colonization of birch by the different morphotypes was quantified, and the EM diversity at the different sites was investigated. Compared to RS, total EM colonization was reduced by 6% (P=0.851) at HS-OH and by 58% (P<0.001) at BHS. Likewise, EM diversity was reduced by 16% (P=0.229) at HS-OH and 52% (P<0.001) at BHS. The Sørensen similarity between EM samples from RS was nearly independent from the sampling date, whereas at HS-OH and especially BHS, the Sørensen similarity decreased with increasing time between the samplings. All EM fungal species dominating at the two heap sites were also present at RS. Thus, fungi with high tolerance against uranium and other stress factors at the heap sites (e.g. heavy metals, nutrient limitation, drought) were selected among all EM fungi of the area. Highly adapted fungi with a distribution restricted to the contaminated soils were not detected.</abstract><cop>Berlin</cop><pub>Springer</pub><doi>10.1007/s00374-005-0849-4</doi><tpages>8</tpages></addata></record> |
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| subjects | Agronomy. Soil science and plant productions Bacteria Betula pendula biodiversity Biological and medical sciences Colonization colonizing ability Community structure Drought Economic plant physiology ectomycorrhizae Fundamental and applied biological sciences. Psychology Heavy metals internal transcribed spacers Microbiology mined soils mining plant communities plant morphology polluted soils polymerase chain reaction restriction fragment length polymorphism sequence analysis Soil contamination Soil science Symbiosis (nodules, symbiotic nitrogen fixation, mycorrhiza...) Uranium |
| title | Diversity of the ectomycorrhiza community at a uranium mining heap |
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