Spatio‐temporal distribution of adult Pacific lamprey Entosphenus tridentatus relative to habitat fragmentation
Pacific lamprey (Entosphenus tridentatus), a fish species native to the Pacific Northwest (USA), have distinctive cultural and ecological value but determining their spatial and temporal distribution is challenging due to a general lack systematic monitoring. In this study, we used counts of Pacific...
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description | Pacific lamprey (Entosphenus tridentatus), a fish species native to the Pacific Northwest (USA), have distinctive cultural and ecological value but determining their spatial and temporal distribution is challenging due to a general lack systematic monitoring. In this study, we used counts of Pacific lamprey redds to model the probability of occurrence and abundance of Pacific lamprey based on environmental covariates including artificial barriers, assuming higher predicted lamprey redds translates to more suitable spawning habitats. Using generalized linear mixed zero‐inflated models, results suggest that Pacific lamprey abundance was generally lower in high gradient streams, further from the ocean. Stream reaches with warmer spring water temperatures and greater historical median spring flows supported higher abundances. Lamprey occurrence was primarily influenced by spring water temperatures and distance from the ocean. We further observed that when streams warm beyond 18°C, confidence intervals around the abundance estimates widen and zero‐inflation increases, indicating a decrease in occurrence. One objective of the study was to recommend where barrier removal or restoration should be prioritized to increase passage and thus access to upstream habitats. We considered artificial barriers to primarily influence the probability of occurrence through access. The barrier variable in this model had a negative effect on the probability of lamprey occurrence, but it was not a strong predictor in the model. While we are not able to suggest specific locations that would most benefit barrier removal or improvement based on these model results, we can identify the watersheds with a higher probability to support Pacific lamprey and provide potential additional habitats by improving habitat connectivity. Focusing restoration and/ or removal of barriers on watersheds in the Mid‐South region of the Oregon Coast (i.e., Alsea, Siuslaw, Coos, Coquille, and Sixes rivers) with higher habitat suitability could prioritize use of limited funds, increase the probability of benefiting Pacific lamprey, and potentially other native lampreys and migratory (e.g., salmon, steelhead; Oncorhynchus) species. Although this manuscript focuses on the Oregon Coast region, the methods are transferrable to other regions where Pacific lamprey are present. |
doi_str_mv | 10.1002/rra.4344 |
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In this study, we used counts of Pacific lamprey redds to model the probability of occurrence and abundance of Pacific lamprey based on environmental covariates including artificial barriers, assuming higher predicted lamprey redds translates to more suitable spawning habitats. Using generalized linear mixed zero‐inflated models, results suggest that Pacific lamprey abundance was generally lower in high gradient streams, further from the ocean. Stream reaches with warmer spring water temperatures and greater historical median spring flows supported higher abundances. Lamprey occurrence was primarily influenced by spring water temperatures and distance from the ocean. We further observed that when streams warm beyond 18°C, confidence intervals around the abundance estimates widen and zero‐inflation increases, indicating a decrease in occurrence. One objective of the study was to recommend where barrier removal or restoration should be prioritized to increase passage and thus access to upstream habitats. We considered artificial barriers to primarily influence the probability of occurrence through access. The barrier variable in this model had a negative effect on the probability of lamprey occurrence, but it was not a strong predictor in the model. While we are not able to suggest specific locations that would most benefit barrier removal or improvement based on these model results, we can identify the watersheds with a higher probability to support Pacific lamprey and provide potential additional habitats by improving habitat connectivity. Focusing restoration and/ or removal of barriers on watersheds in the Mid‐South region of the Oregon Coast (i.e., Alsea, Siuslaw, Coos, Coquille, and Sixes rivers) with higher habitat suitability could prioritize use of limited funds, increase the probability of benefiting Pacific lamprey, and potentially other native lampreys and migratory (e.g., salmon, steelhead; Oncorhynchus) species. Although this manuscript focuses on the Oregon Coast region, the methods are transferrable to other regions where Pacific lamprey are present.</description><identifier>ISSN: 1535-1459</identifier><identifier>EISSN: 1535-1467</identifier><identifier>DOI: 10.1002/rra.4344</identifier><language>eng</language><publisher>Chichester, UK: John Wiley & Sons, Ltd</publisher><subject>Abundance ; adults ; Barriers ; coasts ; Confidence intervals ; distribution ; ecological value ; Entosphenus tridentatus ; Environmental restoration ; Fish ; Geographical distribution ; Habitat connectivity ; Habitat fragmentation ; Habitat selection ; Habitats ; Indigenous species ; linear model ; migratory behavior ; Ocean models ; Oncorhynchus ; Oregon ; Pacific lamprey ; probability ; probability of occurrence ; Redds ; Rivers ; Salmon ; Spawning ; species ; spring ; Spring water ; Statistical analysis ; Streams ; Temporal distribution ; Water temperature ; Watersheds ; zero‐inflated models</subject><ispartof>River research and applications, 2024-12, Vol.40 (10), p.1940-1953</ispartof><rights>2024 John Wiley & Sons Ltd.</rights><rights>2024 John Wiley & Sons, Ltd.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c2174-40afdb9d5262cb6f4de3d6790975f33e2b868124ddfda90981cd301fb38349f93</cites><orcidid>0000-0002-1424-1214 ; 0000-0002-5259-7799</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1002%2Frra.4344$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1002%2Frra.4344$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>314,776,780,1411,27901,27902,45550,45551</link.rule.ids></links><search><creatorcontrib>Anlauf‐Dunn, Kara J.</creatorcontrib><creatorcontrib>Clemens, Benjamin J.</creatorcontrib><creatorcontrib>Falcy, Matthew R.</creatorcontrib><creatorcontrib>Zambory, Courtney</creatorcontrib><title>Spatio‐temporal distribution of adult Pacific lamprey Entosphenus tridentatus relative to habitat fragmentation</title><title>River research and applications</title><description>Pacific lamprey (Entosphenus tridentatus), a fish species native to the Pacific Northwest (USA), have distinctive cultural and ecological value but determining their spatial and temporal distribution is challenging due to a general lack systematic monitoring. In this study, we used counts of Pacific lamprey redds to model the probability of occurrence and abundance of Pacific lamprey based on environmental covariates including artificial barriers, assuming higher predicted lamprey redds translates to more suitable spawning habitats. Using generalized linear mixed zero‐inflated models, results suggest that Pacific lamprey abundance was generally lower in high gradient streams, further from the ocean. Stream reaches with warmer spring water temperatures and greater historical median spring flows supported higher abundances. Lamprey occurrence was primarily influenced by spring water temperatures and distance from the ocean. We further observed that when streams warm beyond 18°C, confidence intervals around the abundance estimates widen and zero‐inflation increases, indicating a decrease in occurrence. One objective of the study was to recommend where barrier removal or restoration should be prioritized to increase passage and thus access to upstream habitats. We considered artificial barriers to primarily influence the probability of occurrence through access. The barrier variable in this model had a negative effect on the probability of lamprey occurrence, but it was not a strong predictor in the model. While we are not able to suggest specific locations that would most benefit barrier removal or improvement based on these model results, we can identify the watersheds with a higher probability to support Pacific lamprey and provide potential additional habitats by improving habitat connectivity. Focusing restoration and/ or removal of barriers on watersheds in the Mid‐South region of the Oregon Coast (i.e., Alsea, Siuslaw, Coos, Coquille, and Sixes rivers) with higher habitat suitability could prioritize use of limited funds, increase the probability of benefiting Pacific lamprey, and potentially other native lampreys and migratory (e.g., salmon, steelhead; Oncorhynchus) species. Although this manuscript focuses on the Oregon Coast region, the methods are transferrable to other regions where Pacific lamprey are present.</description><subject>Abundance</subject><subject>adults</subject><subject>Barriers</subject><subject>coasts</subject><subject>Confidence intervals</subject><subject>distribution</subject><subject>ecological value</subject><subject>Entosphenus tridentatus</subject><subject>Environmental restoration</subject><subject>Fish</subject><subject>Geographical distribution</subject><subject>Habitat connectivity</subject><subject>Habitat fragmentation</subject><subject>Habitat selection</subject><subject>Habitats</subject><subject>Indigenous species</subject><subject>linear model</subject><subject>migratory behavior</subject><subject>Ocean models</subject><subject>Oncorhynchus</subject><subject>Oregon</subject><subject>Pacific lamprey</subject><subject>probability</subject><subject>probability of occurrence</subject><subject>Redds</subject><subject>Rivers</subject><subject>Salmon</subject><subject>Spawning</subject><subject>species</subject><subject>spring</subject><subject>Spring water</subject><subject>Statistical analysis</subject><subject>Streams</subject><subject>Temporal distribution</subject><subject>Water temperature</subject><subject>Watersheds</subject><subject>zero‐inflated models</subject><issn>1535-1459</issn><issn>1535-1467</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><recordid>eNp10MtKAzEYBeAgCtYq-AgBN26mJpNkLstSvEFB8bIeMpPEpmQm0ySjdOcj-Iw-iWkrCoKr_Bw-DuEAcIrRBCOUXjjHJ5RQugdGmBGWYJrl-z83Kw_BkfdLhHBelMUIrB57HrT9fP8Isu2t4wYK7YPT9RDjDloFuRhMgPe80Uo30PC2d3INL7tgfb-Q3eBh5EJ2gYd4O2li4auEwcIFr3VMoXL8pd2CWHkMDhQ3Xp58v2PwfHX5NLtJ5nfXt7PpPGlSnNOEIq5EXQqWZmlTZ4oKSUSWl6jMmSJEpnWRFTilQijBY1rgRhCEVU0KQktVkjE43_X2zq4G6UPVat9IY3gn7eArghlNGcujH4OzP3RpB9fF30VFaIYZZulvYeOs906qqne65W5dYVRttq_i9tVm-0iTHX3TRq7_ddXDw3TrvwBRtohH</recordid><startdate>202412</startdate><enddate>202412</enddate><creator>Anlauf‐Dunn, Kara J.</creator><creator>Clemens, Benjamin J.</creator><creator>Falcy, Matthew R.</creator><creator>Zambory, Courtney</creator><general>John Wiley & Sons, Ltd</general><general>Wiley Subscription Services, Inc</general><scope>AAYXX</scope><scope>CITATION</scope><scope>7QH</scope><scope>7SN</scope><scope>7SS</scope><scope>7ST</scope><scope>7UA</scope><scope>C1K</scope><scope>F1W</scope><scope>H95</scope><scope>H96</scope><scope>L.G</scope><scope>SOI</scope><scope>7S9</scope><scope>L.6</scope><orcidid>https://orcid.org/0000-0002-1424-1214</orcidid><orcidid>https://orcid.org/0000-0002-5259-7799</orcidid></search><sort><creationdate>202412</creationdate><title>Spatio‐temporal distribution of adult Pacific lamprey Entosphenus tridentatus relative to habitat fragmentation</title><author>Anlauf‐Dunn, Kara J. ; Clemens, Benjamin J. ; Falcy, Matthew R. ; Zambory, Courtney</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c2174-40afdb9d5262cb6f4de3d6790975f33e2b868124ddfda90981cd301fb38349f93</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2024</creationdate><topic>Abundance</topic><topic>adults</topic><topic>Barriers</topic><topic>coasts</topic><topic>Confidence intervals</topic><topic>distribution</topic><topic>ecological value</topic><topic>Entosphenus tridentatus</topic><topic>Environmental restoration</topic><topic>Fish</topic><topic>Geographical distribution</topic><topic>Habitat connectivity</topic><topic>Habitat fragmentation</topic><topic>Habitat selection</topic><topic>Habitats</topic><topic>Indigenous species</topic><topic>linear model</topic><topic>migratory behavior</topic><topic>Ocean models</topic><topic>Oncorhynchus</topic><topic>Oregon</topic><topic>Pacific lamprey</topic><topic>probability</topic><topic>probability of occurrence</topic><topic>Redds</topic><topic>Rivers</topic><topic>Salmon</topic><topic>Spawning</topic><topic>species</topic><topic>spring</topic><topic>Spring water</topic><topic>Statistical analysis</topic><topic>Streams</topic><topic>Temporal distribution</topic><topic>Water temperature</topic><topic>Watersheds</topic><topic>zero‐inflated models</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Anlauf‐Dunn, Kara J.</creatorcontrib><creatorcontrib>Clemens, Benjamin J.</creatorcontrib><creatorcontrib>Falcy, Matthew R.</creatorcontrib><creatorcontrib>Zambory, Courtney</creatorcontrib><collection>CrossRef</collection><collection>Aqualine</collection><collection>Ecology Abstracts</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Environment Abstracts</collection><collection>Water Resources Abstracts</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 2: Ocean Technology, Policy & Non-Living Resources</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><collection>Environment Abstracts</collection><collection>AGRICOLA</collection><collection>AGRICOLA - Academic</collection><jtitle>River research and applications</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Anlauf‐Dunn, Kara J.</au><au>Clemens, Benjamin J.</au><au>Falcy, Matthew R.</au><au>Zambory, Courtney</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Spatio‐temporal distribution of adult Pacific lamprey Entosphenus tridentatus relative to habitat fragmentation</atitle><jtitle>River research and applications</jtitle><date>2024-12</date><risdate>2024</risdate><volume>40</volume><issue>10</issue><spage>1940</spage><epage>1953</epage><pages>1940-1953</pages><issn>1535-1459</issn><eissn>1535-1467</eissn><abstract>Pacific lamprey (Entosphenus tridentatus), a fish species native to the Pacific Northwest (USA), have distinctive cultural and ecological value but determining their spatial and temporal distribution is challenging due to a general lack systematic monitoring. In this study, we used counts of Pacific lamprey redds to model the probability of occurrence and abundance of Pacific lamprey based on environmental covariates including artificial barriers, assuming higher predicted lamprey redds translates to more suitable spawning habitats. Using generalized linear mixed zero‐inflated models, results suggest that Pacific lamprey abundance was generally lower in high gradient streams, further from the ocean. Stream reaches with warmer spring water temperatures and greater historical median spring flows supported higher abundances. Lamprey occurrence was primarily influenced by spring water temperatures and distance from the ocean. We further observed that when streams warm beyond 18°C, confidence intervals around the abundance estimates widen and zero‐inflation increases, indicating a decrease in occurrence. One objective of the study was to recommend where barrier removal or restoration should be prioritized to increase passage and thus access to upstream habitats. We considered artificial barriers to primarily influence the probability of occurrence through access. The barrier variable in this model had a negative effect on the probability of lamprey occurrence, but it was not a strong predictor in the model. While we are not able to suggest specific locations that would most benefit barrier removal or improvement based on these model results, we can identify the watersheds with a higher probability to support Pacific lamprey and provide potential additional habitats by improving habitat connectivity. Focusing restoration and/ or removal of barriers on watersheds in the Mid‐South region of the Oregon Coast (i.e., Alsea, Siuslaw, Coos, Coquille, and Sixes rivers) with higher habitat suitability could prioritize use of limited funds, increase the probability of benefiting Pacific lamprey, and potentially other native lampreys and migratory (e.g., salmon, steelhead; Oncorhynchus) species. Although this manuscript focuses on the Oregon Coast region, the methods are transferrable to other regions where Pacific lamprey are present.</abstract><cop>Chichester, UK</cop><pub>John Wiley & Sons, Ltd</pub><doi>10.1002/rra.4344</doi><tpages>14</tpages><orcidid>https://orcid.org/0000-0002-1424-1214</orcidid><orcidid>https://orcid.org/0000-0002-5259-7799</orcidid></addata></record> |
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subjects | Abundance adults Barriers coasts Confidence intervals distribution ecological value Entosphenus tridentatus Environmental restoration Fish Geographical distribution Habitat connectivity Habitat fragmentation Habitat selection Habitats Indigenous species linear model migratory behavior Ocean models Oncorhynchus Oregon Pacific lamprey probability probability of occurrence Redds Rivers Salmon Spawning species spring Spring water Statistical analysis Streams Temporal distribution Water temperature Watersheds zero‐inflated models |
title | Spatio‐temporal distribution of adult Pacific lamprey Entosphenus tridentatus relative to habitat fragmentation |
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