Nodulation of the endemic Retama dasycarpa by Bradyrhizobium spp. in the Maamora forest
Some shrubby legumes represent an appropriate alternative to reduce forest degradation and also an ecologically sustainable strategy that respects the environment, protects against desertification, and improves soil quality and fertility. Retama species are generally used to prevent desertification...
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| Veröffentlicht in: | Symbiosis (Philadelphia, Pa.) Pa.), 2024-09, Vol.94 (1), p.81-94 |
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| creator | Kaddouri, Kaoutar Alami, Soufiane Bouhnik, Omar Lamrabet, Mouad Chaddad, Zohra Bennis, Meryeme Mnasri, Bacem Bedmar, Eulogio J. Bourgerie, Sylvain Mourabito, Domenico Abdelmoumen, Hanaa Badaoui, Bouabid Missbah El Idrissi, Mustapha |
| description | Some shrubby legumes represent an appropriate alternative to reduce forest degradation and also an ecologically sustainable strategy that respects the environment, protects against desertification, and improves soil quality and fertility.
Retama
species are generally used to prevent desertification due to their aptitude to elicit symbiotic nitrogen-fixing associations with soil bacteria called rhizobia. In this work, we isolated and characterized some strains of rhizobia that nodulate
Retama dasycarpa
in the soils of the Maamora forest. Out of 73 bacteria isolated from
R. dasycarpa
root nodules, 20 strains were selected for molecular analyses based on their REP-PCR genomic fingerprints. The
rrs
and
nodC
gene sequence analyses showed that all the strains belong to
Bradyrhizobium
genus and members of the genistearum symbiovar. MLSA of the five housekeeping genes
dnaK
,
atpD
,
gyrB
,
glnII
, and
recA
revealed that the strains are related to
B. lupini
USDA 3051
T
,
B. cytisi
CTAW11
T
,
B. canariense
CTAW25
T
, and a putative new genospecies. The strains metabolize a wide variety of carbohydrates and amino acids as sole carbon and nitrogen sources. Additionally, they solubilize phosphates, and produce siderophores. Our results show that
Retama dasycarpa
in the Maamora forest is nodulated by
Bradyrhizobium
spp. sv. genistearum, similar to the High-Atlas Mountains, and potentially new genospecies. |
| doi_str_mv | 10.1007/s13199-024-01016-z |
| format | Article |
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Retama
species are generally used to prevent desertification due to their aptitude to elicit symbiotic nitrogen-fixing associations with soil bacteria called rhizobia. In this work, we isolated and characterized some strains of rhizobia that nodulate
Retama dasycarpa
in the soils of the Maamora forest. Out of 73 bacteria isolated from
R. dasycarpa
root nodules, 20 strains were selected for molecular analyses based on their REP-PCR genomic fingerprints. The
rrs
and
nodC
gene sequence analyses showed that all the strains belong to
Bradyrhizobium
genus and members of the genistearum symbiovar. MLSA of the five housekeeping genes
dnaK
,
atpD
,
gyrB
,
glnII
, and
recA
revealed that the strains are related to
B. lupini
USDA 3051
T
,
B. cytisi
CTAW11
T
,
B. canariense
CTAW25
T
, and a putative new genospecies. The strains metabolize a wide variety of carbohydrates and amino acids as sole carbon and nitrogen sources. Additionally, they solubilize phosphates, and produce siderophores. Our results show that
Retama dasycarpa
in the Maamora forest is nodulated by
Bradyrhizobium
spp. sv. genistearum, similar to the High-Atlas Mountains, and potentially new genospecies.</description><identifier>ISSN: 0334-5114</identifier><identifier>EISSN: 1878-7665</identifier><identifier>DOI: 10.1007/s13199-024-01016-z</identifier><language>eng</language><publisher>Dordrecht: Springer Netherlands</publisher><subject>Biodegradation ; Biomedical and Life Sciences ; Bradyrhizobium ; Carbohydrates ; carbon ; Carbon sources ; Desertification ; Developmental Biology ; DnaK protein ; Ecology ; Endemic species ; Environmental degradation ; Evolutionary Biology ; Forest degradation ; Forests ; genomics ; genus ; Legumes ; Life Sciences ; Microbiology ; nitrogen ; Nitrogen fixation ; Nitrogen sources ; Nodulation ; nucleotide sequences ; Plant Sciences ; RecA protein ; Retama ; Root nodules ; Siderophores ; soil ; Soil degradation ; Soil microorganisms ; soil quality ; species ; Strains (organisms) ; symbiosis ; USDA</subject><ispartof>Symbiosis (Philadelphia, Pa.), 2024-09, Vol.94 (1), p.81-94</ispartof><rights>The Author(s), under exclusive licence to Springer Nature B.V. 2024. Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c233t-e901de504a117106a0de5eaaa0653f1ff00223796d50937cfaebb2f14d9cbcb13</cites><orcidid>0000-0002-8812-8273</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s13199-024-01016-z$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s13199-024-01016-z$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,777,781,27905,27906,41469,42538,51300</link.rule.ids></links><search><creatorcontrib>Kaddouri, Kaoutar</creatorcontrib><creatorcontrib>Alami, Soufiane</creatorcontrib><creatorcontrib>Bouhnik, Omar</creatorcontrib><creatorcontrib>Lamrabet, Mouad</creatorcontrib><creatorcontrib>Chaddad, Zohra</creatorcontrib><creatorcontrib>Bennis, Meryeme</creatorcontrib><creatorcontrib>Mnasri, Bacem</creatorcontrib><creatorcontrib>Bedmar, Eulogio J.</creatorcontrib><creatorcontrib>Bourgerie, Sylvain</creatorcontrib><creatorcontrib>Mourabito, Domenico</creatorcontrib><creatorcontrib>Abdelmoumen, Hanaa</creatorcontrib><creatorcontrib>Badaoui, Bouabid</creatorcontrib><creatorcontrib>Missbah El Idrissi, Mustapha</creatorcontrib><title>Nodulation of the endemic Retama dasycarpa by Bradyrhizobium spp. in the Maamora forest</title><title>Symbiosis (Philadelphia, Pa.)</title><addtitle>Symbiosis</addtitle><description>Some shrubby legumes represent an appropriate alternative to reduce forest degradation and also an ecologically sustainable strategy that respects the environment, protects against desertification, and improves soil quality and fertility.
Retama
species are generally used to prevent desertification due to their aptitude to elicit symbiotic nitrogen-fixing associations with soil bacteria called rhizobia. In this work, we isolated and characterized some strains of rhizobia that nodulate
Retama dasycarpa
in the soils of the Maamora forest. Out of 73 bacteria isolated from
R. dasycarpa
root nodules, 20 strains were selected for molecular analyses based on their REP-PCR genomic fingerprints. The
rrs
and
nodC
gene sequence analyses showed that all the strains belong to
Bradyrhizobium
genus and members of the genistearum symbiovar. MLSA of the five housekeeping genes
dnaK
,
atpD
,
gyrB
,
glnII
, and
recA
revealed that the strains are related to
B. lupini
USDA 3051
T
,
B. cytisi
CTAW11
T
,
B. canariense
CTAW25
T
, and a putative new genospecies. The strains metabolize a wide variety of carbohydrates and amino acids as sole carbon and nitrogen sources. Additionally, they solubilize phosphates, and produce siderophores. Our results show that
Retama dasycarpa
in the Maamora forest is nodulated by
Bradyrhizobium
spp. sv. genistearum, similar to the High-Atlas Mountains, and potentially new genospecies.</description><subject>Biodegradation</subject><subject>Biomedical and Life Sciences</subject><subject>Bradyrhizobium</subject><subject>Carbohydrates</subject><subject>carbon</subject><subject>Carbon sources</subject><subject>Desertification</subject><subject>Developmental Biology</subject><subject>DnaK protein</subject><subject>Ecology</subject><subject>Endemic species</subject><subject>Environmental degradation</subject><subject>Evolutionary Biology</subject><subject>Forest degradation</subject><subject>Forests</subject><subject>genomics</subject><subject>genus</subject><subject>Legumes</subject><subject>Life Sciences</subject><subject>Microbiology</subject><subject>nitrogen</subject><subject>Nitrogen fixation</subject><subject>Nitrogen sources</subject><subject>Nodulation</subject><subject>nucleotide sequences</subject><subject>Plant Sciences</subject><subject>RecA protein</subject><subject>Retama</subject><subject>Root nodules</subject><subject>Siderophores</subject><subject>soil</subject><subject>Soil degradation</subject><subject>Soil microorganisms</subject><subject>soil quality</subject><subject>species</subject><subject>Strains (organisms)</subject><subject>symbiosis</subject><subject>USDA</subject><issn>0334-5114</issn><issn>1878-7665</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><recordid>eNp9kE1r3DAQhkVJIJtN_0BPgl568XZGY8vrYxvyBWkCIaVHMbalrsPaciX7sPvro-wWCjn0NAw8zzvDK8QnhBUClF8jElZVBirPAAF1tv8gFrgu11mpdXEiFkCUZwVifibOY3wBINSkF-LXg2_nLU-dH6R3ctpYaYfW9l0jn-zEPcuW467hMLKsd_J74HYXNt3e193cyziOK9kNB-0Hc-8DS-eDjdOFOHW8jfbj37kUP6-vni9vs_vHm7vLb_dZo4imzFaArS0gZ8QSQTOkzTIz6IIcOgegFJWVbguoqGwc27pWDvO2auqmRlqKL8fcMfg_czps-i42drvlwfo5GsIiV7QGVAn9_A598XMY0neJItJAqlgnSh2pJvgYg3VmDF3PYWcQzFvX5ti1SV2bQ9dmnyQ6SjHBw28b_kX_x3oFKySB9A</recordid><startdate>20240901</startdate><enddate>20240901</enddate><creator>Kaddouri, Kaoutar</creator><creator>Alami, Soufiane</creator><creator>Bouhnik, Omar</creator><creator>Lamrabet, Mouad</creator><creator>Chaddad, Zohra</creator><creator>Bennis, Meryeme</creator><creator>Mnasri, Bacem</creator><creator>Bedmar, Eulogio J.</creator><creator>Bourgerie, Sylvain</creator><creator>Mourabito, Domenico</creator><creator>Abdelmoumen, Hanaa</creator><creator>Badaoui, Bouabid</creator><creator>Missbah El Idrissi, Mustapha</creator><general>Springer Netherlands</general><general>Springer Nature B.V</general><scope>AAYXX</scope><scope>CITATION</scope><scope>7S9</scope><scope>L.6</scope><orcidid>https://orcid.org/0000-0002-8812-8273</orcidid></search><sort><creationdate>20240901</creationdate><title>Nodulation of the endemic Retama dasycarpa by Bradyrhizobium spp. in the Maamora forest</title><author>Kaddouri, Kaoutar ; Alami, Soufiane ; Bouhnik, Omar ; Lamrabet, Mouad ; Chaddad, Zohra ; Bennis, Meryeme ; Mnasri, Bacem ; Bedmar, Eulogio J. ; Bourgerie, Sylvain ; Mourabito, Domenico ; Abdelmoumen, Hanaa ; Badaoui, Bouabid ; Missbah El Idrissi, Mustapha</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c233t-e901de504a117106a0de5eaaa0653f1ff00223796d50937cfaebb2f14d9cbcb13</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2024</creationdate><topic>Biodegradation</topic><topic>Biomedical and Life Sciences</topic><topic>Bradyrhizobium</topic><topic>Carbohydrates</topic><topic>carbon</topic><topic>Carbon sources</topic><topic>Desertification</topic><topic>Developmental Biology</topic><topic>DnaK protein</topic><topic>Ecology</topic><topic>Endemic species</topic><topic>Environmental degradation</topic><topic>Evolutionary Biology</topic><topic>Forest degradation</topic><topic>Forests</topic><topic>genomics</topic><topic>genus</topic><topic>Legumes</topic><topic>Life Sciences</topic><topic>Microbiology</topic><topic>nitrogen</topic><topic>Nitrogen fixation</topic><topic>Nitrogen sources</topic><topic>Nodulation</topic><topic>nucleotide sequences</topic><topic>Plant Sciences</topic><topic>RecA protein</topic><topic>Retama</topic><topic>Root nodules</topic><topic>Siderophores</topic><topic>soil</topic><topic>Soil degradation</topic><topic>Soil microorganisms</topic><topic>soil quality</topic><topic>species</topic><topic>Strains (organisms)</topic><topic>symbiosis</topic><topic>USDA</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Kaddouri, Kaoutar</creatorcontrib><creatorcontrib>Alami, Soufiane</creatorcontrib><creatorcontrib>Bouhnik, Omar</creatorcontrib><creatorcontrib>Lamrabet, Mouad</creatorcontrib><creatorcontrib>Chaddad, Zohra</creatorcontrib><creatorcontrib>Bennis, Meryeme</creatorcontrib><creatorcontrib>Mnasri, Bacem</creatorcontrib><creatorcontrib>Bedmar, Eulogio J.</creatorcontrib><creatorcontrib>Bourgerie, Sylvain</creatorcontrib><creatorcontrib>Mourabito, Domenico</creatorcontrib><creatorcontrib>Abdelmoumen, Hanaa</creatorcontrib><creatorcontrib>Badaoui, Bouabid</creatorcontrib><creatorcontrib>Missbah El Idrissi, Mustapha</creatorcontrib><collection>CrossRef</collection><collection>AGRICOLA</collection><collection>AGRICOLA - Academic</collection><jtitle>Symbiosis (Philadelphia, Pa.)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Kaddouri, Kaoutar</au><au>Alami, Soufiane</au><au>Bouhnik, Omar</au><au>Lamrabet, Mouad</au><au>Chaddad, Zohra</au><au>Bennis, Meryeme</au><au>Mnasri, Bacem</au><au>Bedmar, Eulogio J.</au><au>Bourgerie, Sylvain</au><au>Mourabito, Domenico</au><au>Abdelmoumen, Hanaa</au><au>Badaoui, Bouabid</au><au>Missbah El Idrissi, Mustapha</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Nodulation of the endemic Retama dasycarpa by Bradyrhizobium spp. in the Maamora forest</atitle><jtitle>Symbiosis (Philadelphia, Pa.)</jtitle><stitle>Symbiosis</stitle><date>2024-09-01</date><risdate>2024</risdate><volume>94</volume><issue>1</issue><spage>81</spage><epage>94</epage><pages>81-94</pages><issn>0334-5114</issn><eissn>1878-7665</eissn><abstract>Some shrubby legumes represent an appropriate alternative to reduce forest degradation and also an ecologically sustainable strategy that respects the environment, protects against desertification, and improves soil quality and fertility.
Retama
species are generally used to prevent desertification due to their aptitude to elicit symbiotic nitrogen-fixing associations with soil bacteria called rhizobia. In this work, we isolated and characterized some strains of rhizobia that nodulate
Retama dasycarpa
in the soils of the Maamora forest. Out of 73 bacteria isolated from
R. dasycarpa
root nodules, 20 strains were selected for molecular analyses based on their REP-PCR genomic fingerprints. The
rrs
and
nodC
gene sequence analyses showed that all the strains belong to
Bradyrhizobium
genus and members of the genistearum symbiovar. MLSA of the five housekeeping genes
dnaK
,
atpD
,
gyrB
,
glnII
, and
recA
revealed that the strains are related to
B. lupini
USDA 3051
T
,
B. cytisi
CTAW11
T
,
B. canariense
CTAW25
T
, and a putative new genospecies. The strains metabolize a wide variety of carbohydrates and amino acids as sole carbon and nitrogen sources. Additionally, they solubilize phosphates, and produce siderophores. Our results show that
Retama dasycarpa
in the Maamora forest is nodulated by
Bradyrhizobium
spp. sv. genistearum, similar to the High-Atlas Mountains, and potentially new genospecies.</abstract><cop>Dordrecht</cop><pub>Springer Netherlands</pub><doi>10.1007/s13199-024-01016-z</doi><tpages>14</tpages><orcidid>https://orcid.org/0000-0002-8812-8273</orcidid></addata></record> |
| fulltext | fulltext |
| identifier | ISSN: 0334-5114 |
| ispartof | Symbiosis (Philadelphia, Pa.), 2024-09, Vol.94 (1), p.81-94 |
| issn | 0334-5114 1878-7665 |
| language | eng |
| recordid | cdi_proquest_journals_3133603258 |
| source | Springer Nature - Complete Springer Journals |
| subjects | Biodegradation Biomedical and Life Sciences Bradyrhizobium Carbohydrates carbon Carbon sources Desertification Developmental Biology DnaK protein Ecology Endemic species Environmental degradation Evolutionary Biology Forest degradation Forests genomics genus Legumes Life Sciences Microbiology nitrogen Nitrogen fixation Nitrogen sources Nodulation nucleotide sequences Plant Sciences RecA protein Retama Root nodules Siderophores soil Soil degradation Soil microorganisms soil quality species Strains (organisms) symbiosis USDA |
| title | Nodulation of the endemic Retama dasycarpa by Bradyrhizobium spp. in the Maamora forest |
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