Towards a better understanding of Prunus (Rosaceae): molecular and morphological notes on Prunus subgenus Cerasus in Turkey
Abstract In this study, we explore the relationships among taxa of Prunus subgenus Cerasus in Turkey using a combination of macromorphology, micromorphology and molecular techniques. We recorded qualitative and quantitative characteristics of flowers, leaves, seeds and endocarp for 96 populations re...
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Veröffentlicht in: | Botanical journal of the Linnean Society 2023-07, Vol.202 (3), p.346-362 |
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creator | Ciftci, Almila Gercek, Yusuf C Mollman, Rachel Bostanci Ordu, Pinar I Yazici, Ceyda Yaprak, Ahmet E Morgil, Hande Şik, Levent Erol, Osman |
description | Abstract
In this study, we explore the relationships among taxa of Prunus subgenus Cerasus in Turkey using a combination of macromorphology, micromorphology and molecular techniques. We recorded qualitative and quantitative characteristics of flowers, leaves, seeds and endocarp for 96 populations representing 14 taxa of Prunus subgenus Cerasus. ITS, matK, ycf1, trnL-trnF DNA sequence data were used to reconstruct phylogenetic trees for this group. Haplotype analyses results found 11 haplotypes among the samples used in this study. We also note that the infraspecific taxa of Cerasus angustifolia (=P. albicaulis), P. mahaleb, P. microcarpa and P. prostrata, as described by previous authors, do not exhibit significant differences even among the features of foliar morphology that are so often used to distinguish them from one another. As a general rule, our analyses indicate that the highly variable features of leaf micromorphology and endocarp and seed micromorphology are not taxonomically significant. In contrast, although floral morphology is often overlooked in systematic studies of Prunus subgenus Cerasus, we found several taxonomically useful flower characters, including sepal indumentum, hypanthium shape and indumentum and petal shape. This work clarifies the infraspecific relationships of members of Prunus subgenus Cerasus in Turkey and solves some taxonomic problems. |
doi_str_mv | 10.1093/botlinnean/boac080 |
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In this study, we explore the relationships among taxa of Prunus subgenus Cerasus in Turkey using a combination of macromorphology, micromorphology and molecular techniques. We recorded qualitative and quantitative characteristics of flowers, leaves, seeds and endocarp for 96 populations representing 14 taxa of Prunus subgenus Cerasus. ITS, matK, ycf1, trnL-trnF DNA sequence data were used to reconstruct phylogenetic trees for this group. Haplotype analyses results found 11 haplotypes among the samples used in this study. We also note that the infraspecific taxa of Cerasus angustifolia (=P. albicaulis), P. mahaleb, P. microcarpa and P. prostrata, as described by previous authors, do not exhibit significant differences even among the features of foliar morphology that are so often used to distinguish them from one another. As a general rule, our analyses indicate that the highly variable features of leaf micromorphology and endocarp and seed micromorphology are not taxonomically significant. In contrast, although floral morphology is often overlooked in systematic studies of Prunus subgenus Cerasus, we found several taxonomically useful flower characters, including sepal indumentum, hypanthium shape and indumentum and petal shape. This work clarifies the infraspecific relationships of members of Prunus subgenus Cerasus in Turkey and solves some taxonomic problems.</description><identifier>ISSN: 0024-4074</identifier><identifier>EISSN: 1095-8339</identifier><identifier>DOI: 10.1093/botlinnean/boac080</identifier><language>eng</language><publisher>UK: Oxford University Press</publisher><subject>Flowers ; Haplotypes ; Leaves ; Morphology ; Nucleotide sequence ; Phylogeny ; Physical characteristics ; Prunus ; Qualitative analysis ; Seeds ; Taxa</subject><ispartof>Botanical journal of the Linnean Society, 2023-07, Vol.202 (3), p.346-362</ispartof><rights>The Author(s) 2023. Published by Oxford University Press on behalf of The Linnean Society of London. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com 2023</rights><rights>The Author(s) 2023. Published by Oxford University Press on behalf of The Linnean Society of London. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c313t-da36c23cb8cbda7eb6ebdfde631c46974e3163c6f19245a1cd3966fd9a83e37b3</citedby><cites>FETCH-LOGICAL-c313t-da36c23cb8cbda7eb6ebdfde631c46974e3163c6f19245a1cd3966fd9a83e37b3</cites><orcidid>0000-0002-6873-6212 ; 0000-0001-6464-2641 ; 0000-0002-8141-164X ; 0000-0003-1178-6689 ; 0000-0002-3406-3064 ; 0000-0002-3274-5934 ; 0000-0002-7565-5795 ; 0000-0002-6310-1402 ; 0000-0001-5372-0229</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,1578,27901,27902</link.rule.ids></links><search><creatorcontrib>Ciftci, Almila</creatorcontrib><creatorcontrib>Gercek, Yusuf C</creatorcontrib><creatorcontrib>Mollman, Rachel</creatorcontrib><creatorcontrib>Bostanci Ordu, Pinar I</creatorcontrib><creatorcontrib>Yazici, Ceyda</creatorcontrib><creatorcontrib>Yaprak, Ahmet E</creatorcontrib><creatorcontrib>Morgil, Hande</creatorcontrib><creatorcontrib>Şik, Levent</creatorcontrib><creatorcontrib>Erol, Osman</creatorcontrib><title>Towards a better understanding of Prunus (Rosaceae): molecular and morphological notes on Prunus subgenus Cerasus in Turkey</title><title>Botanical journal of the Linnean Society</title><description>Abstract
In this study, we explore the relationships among taxa of Prunus subgenus Cerasus in Turkey using a combination of macromorphology, micromorphology and molecular techniques. We recorded qualitative and quantitative characteristics of flowers, leaves, seeds and endocarp for 96 populations representing 14 taxa of Prunus subgenus Cerasus. ITS, matK, ycf1, trnL-trnF DNA sequence data were used to reconstruct phylogenetic trees for this group. Haplotype analyses results found 11 haplotypes among the samples used in this study. We also note that the infraspecific taxa of Cerasus angustifolia (=P. albicaulis), P. mahaleb, P. microcarpa and P. prostrata, as described by previous authors, do not exhibit significant differences even among the features of foliar morphology that are so often used to distinguish them from one another. As a general rule, our analyses indicate that the highly variable features of leaf micromorphology and endocarp and seed micromorphology are not taxonomically significant. In contrast, although floral morphology is often overlooked in systematic studies of Prunus subgenus Cerasus, we found several taxonomically useful flower characters, including sepal indumentum, hypanthium shape and indumentum and petal shape. This work clarifies the infraspecific relationships of members of Prunus subgenus Cerasus in Turkey and solves some taxonomic problems.</description><subject>Flowers</subject><subject>Haplotypes</subject><subject>Leaves</subject><subject>Morphology</subject><subject>Nucleotide sequence</subject><subject>Phylogeny</subject><subject>Physical characteristics</subject><subject>Prunus</subject><subject>Qualitative analysis</subject><subject>Seeds</subject><subject>Taxa</subject><issn>0024-4074</issn><issn>1095-8339</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2023</creationdate><recordtype>article</recordtype><recordid>eNqNkE9LAzEQxYMoWKtfwFPAix5Wk802u-tNiv-goEg9L5Nktm7dJjXZIMUvb6QVr57eG-b3ZuARcsrZJWe1uFJu6DtrEWyyoFnF9sgobSZZJUS9T0aM5UVWsLI4JEchLBnjvCjrEfmau0_wJlCgCocBPY3WoA8DWNPZBXUtffbRxkDPX1wAjYAX13TletSxB08Tlia_fnO9W3QaemrdgIE6-5sLUS3wx0zRQ0jaWTqP_h03x-SghT7gyU7H5PXudj59yGZP94_Tm1mmBRdDZkBInQutKq0MlKgkKtMalILrQtZlgYJLoWXL67yYANdG1FK2poZKoCiVGJOz7d21dx8Rw9AsXfQ2vWwEz2XJmagnicq3lPYuBI9ts_bdCvym4az5Kbn5K7nZlZxC2Tbk4vo__DfzB4bo</recordid><startdate>20230701</startdate><enddate>20230701</enddate><creator>Ciftci, Almila</creator><creator>Gercek, Yusuf C</creator><creator>Mollman, Rachel</creator><creator>Bostanci Ordu, Pinar I</creator><creator>Yazici, Ceyda</creator><creator>Yaprak, Ahmet E</creator><creator>Morgil, Hande</creator><creator>Şik, Levent</creator><creator>Erol, Osman</creator><general>Oxford University Press</general><scope>AAYXX</scope><scope>CITATION</scope><scope>7SN</scope><scope>7SS</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><orcidid>https://orcid.org/0000-0002-6873-6212</orcidid><orcidid>https://orcid.org/0000-0001-6464-2641</orcidid><orcidid>https://orcid.org/0000-0002-8141-164X</orcidid><orcidid>https://orcid.org/0000-0003-1178-6689</orcidid><orcidid>https://orcid.org/0000-0002-3406-3064</orcidid><orcidid>https://orcid.org/0000-0002-3274-5934</orcidid><orcidid>https://orcid.org/0000-0002-7565-5795</orcidid><orcidid>https://orcid.org/0000-0002-6310-1402</orcidid><orcidid>https://orcid.org/0000-0001-5372-0229</orcidid></search><sort><creationdate>20230701</creationdate><title>Towards a better understanding of Prunus (Rosaceae): molecular and morphological notes on Prunus subgenus Cerasus in Turkey</title><author>Ciftci, Almila ; Gercek, Yusuf C ; Mollman, Rachel ; Bostanci Ordu, Pinar I ; Yazici, Ceyda ; Yaprak, Ahmet E ; Morgil, Hande ; Şik, Levent ; Erol, Osman</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c313t-da36c23cb8cbda7eb6ebdfde631c46974e3163c6f19245a1cd3966fd9a83e37b3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2023</creationdate><topic>Flowers</topic><topic>Haplotypes</topic><topic>Leaves</topic><topic>Morphology</topic><topic>Nucleotide sequence</topic><topic>Phylogeny</topic><topic>Physical characteristics</topic><topic>Prunus</topic><topic>Qualitative analysis</topic><topic>Seeds</topic><topic>Taxa</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Ciftci, Almila</creatorcontrib><creatorcontrib>Gercek, Yusuf C</creatorcontrib><creatorcontrib>Mollman, Rachel</creatorcontrib><creatorcontrib>Bostanci Ordu, Pinar I</creatorcontrib><creatorcontrib>Yazici, Ceyda</creatorcontrib><creatorcontrib>Yaprak, Ahmet E</creatorcontrib><creatorcontrib>Morgil, Hande</creatorcontrib><creatorcontrib>Şik, Levent</creatorcontrib><creatorcontrib>Erol, Osman</creatorcontrib><collection>CrossRef</collection><collection>Ecology Abstracts</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><jtitle>Botanical journal of the Linnean Society</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Ciftci, Almila</au><au>Gercek, Yusuf C</au><au>Mollman, Rachel</au><au>Bostanci Ordu, Pinar I</au><au>Yazici, Ceyda</au><au>Yaprak, Ahmet E</au><au>Morgil, Hande</au><au>Şik, Levent</au><au>Erol, Osman</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Towards a better understanding of Prunus (Rosaceae): molecular and morphological notes on Prunus subgenus Cerasus in Turkey</atitle><jtitle>Botanical journal of the Linnean Society</jtitle><date>2023-07-01</date><risdate>2023</risdate><volume>202</volume><issue>3</issue><spage>346</spage><epage>362</epage><pages>346-362</pages><issn>0024-4074</issn><eissn>1095-8339</eissn><abstract>Abstract
In this study, we explore the relationships among taxa of Prunus subgenus Cerasus in Turkey using a combination of macromorphology, micromorphology and molecular techniques. We recorded qualitative and quantitative characteristics of flowers, leaves, seeds and endocarp for 96 populations representing 14 taxa of Prunus subgenus Cerasus. ITS, matK, ycf1, trnL-trnF DNA sequence data were used to reconstruct phylogenetic trees for this group. Haplotype analyses results found 11 haplotypes among the samples used in this study. We also note that the infraspecific taxa of Cerasus angustifolia (=P. albicaulis), P. mahaleb, P. microcarpa and P. prostrata, as described by previous authors, do not exhibit significant differences even among the features of foliar morphology that are so often used to distinguish them from one another. As a general rule, our analyses indicate that the highly variable features of leaf micromorphology and endocarp and seed micromorphology are not taxonomically significant. In contrast, although floral morphology is often overlooked in systematic studies of Prunus subgenus Cerasus, we found several taxonomically useful flower characters, including sepal indumentum, hypanthium shape and indumentum and petal shape. This work clarifies the infraspecific relationships of members of Prunus subgenus Cerasus in Turkey and solves some taxonomic problems.</abstract><cop>UK</cop><pub>Oxford University Press</pub><doi>10.1093/botlinnean/boac080</doi><tpages>17</tpages><orcidid>https://orcid.org/0000-0002-6873-6212</orcidid><orcidid>https://orcid.org/0000-0001-6464-2641</orcidid><orcidid>https://orcid.org/0000-0002-8141-164X</orcidid><orcidid>https://orcid.org/0000-0003-1178-6689</orcidid><orcidid>https://orcid.org/0000-0002-3406-3064</orcidid><orcidid>https://orcid.org/0000-0002-3274-5934</orcidid><orcidid>https://orcid.org/0000-0002-7565-5795</orcidid><orcidid>https://orcid.org/0000-0002-6310-1402</orcidid><orcidid>https://orcid.org/0000-0001-5372-0229</orcidid></addata></record> |
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source | Oxford University Press Journals All Titles (1996-Current) |
subjects | Flowers Haplotypes Leaves Morphology Nucleotide sequence Phylogeny Physical characteristics Prunus Qualitative analysis Seeds Taxa |
title | Towards a better understanding of Prunus (Rosaceae): molecular and morphological notes on Prunus subgenus Cerasus in Turkey |
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